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non port: biology/seqan-apps/Makefile
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Number of commits found: 28

Mon, 19 Aug 2019
[ 15:35 jbeich ] Original commit   Revision:509290
509290 archivers/innoextract/Makefile
509290 archivers/tardy/Makefile
509290 astro/libkgeomap/Makefile
509290 astro/libosmium/Makefile
509290 audio/ardour/Makefile
509290 audio/ardour5/Makefile
509290 audio/clementine-player/Makefile
509290 audio/cpp-xmms2/Makefile
509290 audio/csound/Makefile
509290 audio/faust-lv2/Makefile

(Only the first 10 of 412 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.71.0

Changes:	http://www.boost.org/users/history/version_1_71_0.html
PR:		238827
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D20774
Fri, 26 Jul 2019
[ 20:46 gerald ] Original commit   Revision:507372
507372 Mk/bsd.ruby.mk
507372 accessibility/atkmm/Makefile
507372 accessibility/kmag/Makefile
507372 accessibility/kmousetool/Makefile
507372 accessibility/kmouth/Makefile
507372 accessibility/libqaccessibilityclient/Makefile
507372 accessibility/qt5-speech/Makefile
507372 archivers/R-cran-zip/Makefile
507372 archivers/ark/Makefile
507372 archivers/brotli/Makefile

(Only the first 10 of 3853 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
Fri, 12 Apr 2019
[ 06:36 jbeich ] Original commit   Revision:498698
498698 archivers/innoextract/Makefile
498698 archivers/tardy/Makefile
498698 astro/libkgeomap/Makefile
498698 astro/libosmium/Makefile
498698 audio/ardour/Makefile
498698 audio/ardour5/Makefile
498698 audio/clementine-player/Makefile
498698 audio/cpp-xmms2/Makefile
498698 audio/csound/Makefile
498698 audio/faust-lv2/Makefile

(Only the first 10 of 392 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.70.0

Changes:	http://www.boost.org/users/history/version_1_70_0.html
PR:		235956
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D19303
Tue, 25 Dec 2018
[ 20:25 tcberner ] Original commit   Revision:488341
488341 CHANGES
488341 Mk/Uses/cmake.mk
488341 accessibility/jovie-kde4/Makefile
488341 accessibility/kaccessible-kde4/Makefile
488341 accessibility/kmag-kde4/Makefile
488341 accessibility/kmag/Makefile
488341 accessibility/kmousetool-kde4/Makefile
488341 accessibility/kmousetool/Makefile
488341 accessibility/kmouth-kde4/Makefile
488341 accessibility/kmouth/Makefile

(Only the first 10 of 1277 ports in this commit are shown above. View all ports for this commit)
Change cmake default behaviour to outsource.

Ports that build out of source now simply can use "USES=cmake"
instead of "USES=cmake:outsource". Ports that fail to build
out of source now need to specify "USES=cmake:insource".

I tried to only set insource where explictely needed.

PR:		232038
Exp-run by:	antoine
Wed, 12 Dec 2018
[ 01:35 gerald ] Original commit   Revision:487272
487272 Mk/bsd.ruby.mk
487272 accessibility/atkmm/Makefile
487272 accessibility/kmag/Makefile
487272 accessibility/kmousetool/Makefile
487272 accessibility/kmouth/Makefile
487272 accessibility/qt5-speech/Makefile
487272 archivers/R-cran-zip/Makefile
487272 archivers/ark/Makefile
487272 archivers/brotli/Makefile
487272 archivers/c-blosc/Makefile

(Only the first 10 of 3168 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
[ 00:15 jbeich ] Original commit   Revision:487266
487266 archivers/innoextract/Makefile
487266 archivers/tardy/Makefile
487266 astro/libkgeomap-kde4/Makefile
487266 astro/libkgeomap/Makefile
487266 astro/libosmium/Makefile
487266 audio/ardour/Makefile
487266 audio/ardour5/Makefile
487266 audio/clementine-player/Makefile
487266 audio/cpp-xmms2/Makefile
487266 audio/csound/Makefile

(Only the first 10 of 415 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.69.0

Changes:	http://www.boost.org/users/history/version_1_69_0.html
PR:		232525
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D17645
Fri, 9 Nov 2018
[ 21:37 swills ] Original commit   Revision:484547
484547 biology/seqan-apps/Makefile
biology/seqan-apps: fix build with GCC-based architectures

PR:		232045
Submitted by:	Piotr Kubaj <pkubaj@anongoth.pl>
Approved by:	maintainer timeout (h2+fbsdports@fsfe.org >1 month)
Thu, 9 Aug 2018
[ 06:58 jbeich ] Original commit   Revision:476723
476723 archivers/innoextract/Makefile
476723 archivers/tardy/Makefile
476723 astro/libkgeomap-kde4/Makefile
476723 astro/libkgeomap/Makefile
476723 astro/libosmium/Makefile
476723 audio/ardour/Makefile
476723 audio/ardour5/Makefile
476723 audio/clementine-player/Makefile
476723 audio/cpp-xmms2/Makefile
476723 audio/csound6/Makefile

(Only the first 10 of 404 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.68.0

- Switch to C++14 for libboost_system to support C++14 consumers

Changes:	http://www.boost.org/users/history/version_1_68_0.html
PR:		229569
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D16165
Sun, 29 Jul 2018
[ 22:18 gerald ] Original commit   Revision:475857
475857 Mk/bsd.ruby.mk
475857 accessibility/atkmm/Makefile
475857 archivers/brotli/Makefile
475857 archivers/c-blosc/Makefile
475857 archivers/innoextract/Makefile
475857 archivers/kf5-karchive/Makefile
475857 archivers/lazperf/Makefile
475857 archivers/libpar2/Makefile
475857 archivers/paq/Makefile
475857 archivers/pxz/Makefile

(Only the first 10 of 1480 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISION for ports depending on the canonical version of GCC
in the ports tree (via Mk/bsd.default-versions.mk and lang/gcc) which
has now moved from GCC 6 to GCC 7 by default.

This includes ports
 - featuring USE_GCC=yes or USE_GCC=any,
 - featuring USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and those
 - with USES=compiler specifying one of openmp, nestedfct, c11, c++0x,
   c++11-lib, c++11-lang, c++14-lang, c++17-lang, or gcc-c++11-lib.

PR:		222542
Mon, 18 Jun 2018
[ 19:14 linimon ] Original commit   Revision:472707
472707 biology/seqan-apps/Makefile
Mark as broken on powerpc64 pending fix for PR 199603.

Approved by:	portmgr (tier-2 blanket)
Wed, 18 Apr 2018
[ 13:57 jbeich ] Original commit   Revision:467711
467711 Mk/Uses/python.mk
467711 archivers/innoextract/Makefile
467711 archivers/tardy/Makefile
467711 astro/libkgeomap-kde4/Makefile
467711 astro/libkgeomap/Makefile
467711 astro/libosmium/Makefile
467711 audio/ardour/Makefile
467711 audio/ardour5/Makefile
467711 audio/clementine-player/Makefile
467711 audio/cpp-xmms2/Makefile

(Only the first 10 of 388 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.67.0

Changes:	http://www.boost.org/users/history/version_1_67_0.html
PR:		227427
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D15030
Sat, 10 Mar 2018
[ 06:21 yuri ] Original commit   Revision:464043
464043 biology/seqan-apps/Makefile
464043 biology/seqan-apps/distinfo
464043 biology/seqan-apps/pkg-plist
464043 biology/seqan/Makefile
464043 biology/seqan/distinfo
464043 biology/seqan/pkg-descr
464043 biology/seqan/pkg-plist
biology/seqan-apps, biology/seqan: Update to 2.4.0

Port changes for biology/seqan-apps:
* Changed to DISTVERSION
* Updated COMMENT
* Added USES=compiler:openmp
* Removed BROKEN_xx (upstream now claims support for these architectures)
* Removed USE_GCC
* Added SSE4/AVX2/NATIVE SIMD options

Port changes for biology/seqan:
* Changed to DISTVERSION
* Added NO_ARCH
* Added PORTDOCS=*
* Updated do-install

PR:		225682
Submitted by:	Hannes Hauswedell <h2+fbsdports@fsfe.org> (maintainer)
Approved by:	tcberner (mentor, implicit)
Thu, 18 Jan 2018
[ 04:11 jbeich ] Original commit   Revision:459315
459315 archivers/innoextract/Makefile
459315 archivers/tardy/Makefile
459315 astro/libkgeomap/Makefile
459315 astro/libosmium/Makefile
459315 audio/ardour/Makefile
459315 audio/ardour5/Makefile
459315 audio/clementine-player/Makefile
459315 audio/cpp-xmms2/Makefile
459315 audio/csound6/Makefile
459315 audio/mp3plot/Makefile

(Only the first 10 of 356 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.66.0

Changes:	http://www.boost.org/users/history/version_1_66_0.html
PR:		223922
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D13279
Mon, 11 Dec 2017
[ 07:18 linimon ] Original commit   Revision:455927
455927 biology/iqtree/Makefile
455927 biology/seqan-apps/Makefile
455927 devel/rcs57/Makefile
455927 sysutils/p5-File-Stat-Bits/Makefile
455927 www/h2o/Makefile
455927 www/mod_security-devel/Makefile
Mark several ports newly broken on arm.

While here, pet portlint.

Approved by:	portmgr (tier-2 blanket)
Mon, 25 Sep 2017
[ 00:08 jbeich ] Original commit   Revision:450560
450560 archivers/innoextract/Makefile
450560 archivers/tardy/Makefile
450560 astro/libkgeomap/Makefile
450560 astro/libosmium/Makefile
450560 audio/ardour/Makefile
450560 audio/ardour5/Makefile
450560 audio/clementine-player/Makefile
450560 audio/cpp-xmms2/Makefile
450560 audio/csound6/Makefile
450560 audio/mp3plot/Makefile

(Only the first 10 of 342 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.65.1

Changes:	http://www.boost.org/users/history/version_1_65_1.html
PR:		218835
Approved by:	maintainer timeout (1.65.1: 2 weeks; 1.65.0: 1 month)
Tested by:	jhibbits (on powerpc64, earlier version)
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D11582
[ 00:05 jbeich ] Original commit   Revision:450557
450557 archivers/innoextract/Makefile
450557 archivers/tardy/Makefile
450557 astro/libkgeomap/Makefile
450557 astro/libosmium/Makefile
450557 audio/ardour/Makefile
450557 audio/ardour5/Makefile
450557 audio/clementine-player/Makefile
450557 audio/cpp-xmms2/Makefile
450557 audio/csound6/Makefile
450557 audio/mp3plot/Makefile

(Only the first 10 of 327 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: enable C++11 features

PR:		218835
Obtained from:	https://github.com/DragonFlyBSD/DeltaPorts/pull/690
Approved by:	maintainer timeout (2 months)
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D11582
Sun, 10 Sep 2017
[ 20:55 gerald ] Original commit   Revision:449591
449591 accessibility/atkmm/Makefile
449591 archivers/brotli/Makefile
449591 archivers/c-blosc/Makefile
449591 archivers/kf5-karchive/Makefile
449591 archivers/libpar2/Makefile
449591 archivers/paq/Makefile
449591 archivers/pxz/Makefile
449591 archivers/py-brotli/Makefile
449591 archivers/rvm/Makefile
449591 astro/geographiclib/Makefile

(Only the first 10 of 1201 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISION for ports depending on the canonical version of GCC
(via Mk/bsd.default-versions.mk and lang/gcc) which has moved from
GCC 5.4 to GCC 6.4 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++11-lang,
   c++14-lang, c++0x, c11, or gcc-c++11-lib.

PR:		219275
Sun, 21 May 2017
[ 23:37 linimon ] Original commit   Revision:441431
441431 biology/seqan-apps/Makefile
It is possible that r441426 will fix the build problem on armv6.  Give
it a try.

Approved by:	portmgr (tier-2 blanket)
Tue, 2 May 2017
[ 06:48 jbeich ] Original commit   Revision:439934
439934 archivers/innoextract/Makefile
439934 archivers/tardy/Makefile
439934 astro/libkgeomap/Makefile
439934 astro/libosmium/Makefile
439934 audio/ardour/Makefile
439934 audio/ardour5/Makefile
439934 audio/clementine-player/Makefile
439934 audio/cpp-xmms2/Makefile
439934 audio/csound6/Makefile
439934 audio/mp3plot/Makefile

(Only the first 10 of 336 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.64.0

Changes:	http://www.boost.org/users/history/version_1_64_0.html
PR:		218835
Approved by:	office (bapt)
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D10472
Mon, 1 May 2017
[ 19:24 linimon ] Original commit   Revision:439905
439905 audio/gnomoradio/Makefile
439905 audio/musicpd/Makefile
439905 audio/umurmur/Makefile
439905 biology/crux/Makefile
439905 biology/seqan-apps/Makefile
439905 cad/alliance/Makefile
439905 editors/texstudio/Makefile
439905 emulators/catapult/Makefile
439905 emulators/dtcyber/Makefile
439905 emulators/pearpc/Makefile

(Only the first 10 of 11 ports in this commit are shown above. View all ports for this commit)
Provide error messages for some ports failing on aarch64, and, in a
few cases, other tier-2 archs.

While here, pet portlint.

Approved by:	portmgr (tier-2 blanket)
Sat, 1 Apr 2017
[ 15:23 gerald ] Original commit   Revision:437439
437439 archivers/kf5-karchive/Makefile
437439 archivers/paq/Makefile
437439 archivers/pxz/Makefile
437439 archivers/py-brotli/Makefile
437439 archivers/rvm/Makefile
437439 astro/geographiclib/Makefile
437439 astro/gpstk/Makefile
437439 astro/kstars/Makefile
437439 astro/libosmium/Makefile
437439 astro/nightfall/Makefile

(Only the first 10 of 1118 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISIONs for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.9.4 to GCC 5.4 (at least under some
circumstances such as versions of FreeBSD or platforms).

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using using Mk/bsd.octave.mk which in turn has USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++14-lang,
   c++11-lang, c++0x, c11, or gcc-c++11-lib.

PR:		216707
Sun, 26 Feb 2017
[ 15:38 linimon ] Original commit   Revision:434890
434890 biology/seqan-apps/Makefile
434890 emulators/gem5/Makefile
434890 games/oolite/Makefile
434890 lang/racket-minimal/Makefile
434890 lang/racket/Makefile
Mark a few more ports that create large logfiles broken on armv6.

Approved by:	portmgr (tier-2 blanket)
Mon, 9 Jan 2017
[ 13:16 amdmi3 ] Original commit   Revision:430947
430947 archivers/unarchiver/Makefile
430947 audio/csound/Makefile
430947 audio/csound6/Makefile
430947 audio/optimfrog/Makefile
430947 audio/praat/Makefile
430947 audio/shoutcast/Makefile
430947 audio/sndio/Makefile
430947 benchmarks/fio/Makefile
430947 biology/seqan-apps/Makefile
430947 biology/ugene/Makefile

(Only the first 10 of 104 ports in this commit are shown above. View all ports for this commit)
- Remove always-true/false conditions after FreeBSD 9, 10.1, 10.2 EOL

Approved by:	portmgr blanket
Fri, 6 Jan 2017
[ 08:45 jbeich ] Original commit   Revision:430692
430692 archivers/innoextract/Makefile
430692 archivers/tardy/Makefile
430692 astro/libkgeomap/Makefile
430692 astro/libosmium/Makefile
430692 audio/ardour/Makefile
430692 audio/clementine-player/Makefile
430692 audio/cpp-xmms2/Makefile
430692 audio/csound6/Makefile
430692 audio/mp3plot/Makefile
430692 audio/mumble/Makefile

(Only the first 10 of 324 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.63.0

Changes:	http://www.boost.org/users/history/version_1_63_0.html
PR:		215598
Exp-run by:	antoine
Approved by:	office (bapt)
MFH:		2017Q1
Fri, 25 Nov 2016
[ 21:27 gerald ] Original commit   Revision:427129
427129 biology/seqan-apps/Makefile
427129 devel/bisoncpp/Makefile
427129 devel/libbobcat/Makefile
427129 devel/pure-stldict/Makefile
427129 emulators/dolphin-emu/Makefile
427129 lang/cilkplus/Makefile
427129 lang/gcc6-devel/Makefile
427129 lang/gcc6/Makefile
427129 lang/gcc7-devel/Makefile
427129 lang/ruby21/Makefile

(Only the first 10 of 12 ports in this commit are shown above. View all ports for this commit)
Replace USE_GCC=4.9+ by USE_GCC=yes, now that lang/gcc and the default
version for GCC in the Ports Collection have moved to GCC 4.9.
Wed, 23 Nov 2016
[ 12:45 jbeich ] Original commit   Revision:426908
426908 archivers/innoextract/Makefile
426908 archivers/tardy/Makefile
426908 astro/libkgeomap/Makefile
426908 astro/osmium/Makefile
426908 audio/ardour/Makefile
426908 audio/clementine-player/Makefile
426908 audio/cpp-xmms2/Makefile
426908 audio/csound6/Makefile
426908 audio/mp3plot/Makefile
426908 audio/mumble/Makefile

(Only the first 10 of 353 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.62.0

- Enable `long double` C99 math usage
- Switch 9.x back to building with GCC

Changes:	http://www.boost.org/users/history/
PR:		199601
Submitted by:	Chen Xu, bapt, amdmi3, truckman (based on)
Reviewed by:	rakuco (kde) (earlier version)
Exp-run by:	antoine (3 tries), truckman (consumers only, earlier versions)
Approved by:	bapt (office)
Wed, 14 Sep 2016
[ 19:38 pawel ] Original commit   Revision:422156
422156 biology/seqan-apps/Makefile
422156 biology/seqan-apps/distinfo
422156 biology/seqan-apps/pkg-descr
422156 biology/seqan/Makefile
422156 biology/seqan/distinfo
422156 biology/seqan/pkg-plist
- Update biology/seqan and bilogy/seqan-apps to version 2.2.0 [1]
- Fix spelling in pkg-descr

PR:		212682 [1]
Submitted by:	Hannes Hauswedell (maintainer) [1]
Tue, 10 May 2016
[ 00:52 junovitch ] Original commit   Revision:414897
414897 biology/Makefile
414897 biology/seqan-apps
414897 biology/seqan-apps/Makefile
414897 biology/seqan-apps/distinfo
414897 biology/seqan-apps/pkg-descr
414897 biology/seqan-apps/pkg-plist
New port: biology/seqan-apps

SeqAn is an open source C++ library of efficient algorithms
and data structures for the analysis of sequences with the
focus on biological data.

This port contains applications built on SeqAn and developed
within the SeqAn project. Among them are famous read mappers
like RazerS and Yara, as well as many other tools. Some
applications are packaged seperately and the library
can be found at biology/seqan.

WWW: http://www.seqan.de/

PR:		204127
Submitted by:	Hannes Hauswedell <h2+fbsdports@fsfe.org>

Number of commits found: 28

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