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Why was the website so slow for so long?

The cause of the slowdown was a change to the ZFS dataset. In conjunction with the database server, very little caching was being done. This combination resulted in increased disk I/O as the system churned through the database. Details in the blog post which outlines the various things which changed. Many graphs.

non port: biology/sim4/Makefile
SVNWeb

Number of commits found XX: 15

Sun, 16 Feb 2014
[ 11:43 ehaupt ] Original commit   Revision:344539
344539 biology/sim4/Makefile
Support staging
Fri, 20 Sep 2013
[ 15:55 bapt ] Original commit   Revision:327709
327709 biology/ariadne/Makefile
327709 biology/artemis/Makefile
327709 biology/avida/Makefile
327709 biology/babel/Makefile
327709 biology/biococoa/Makefile
327709 biology/biojava/Makefile
327709 biology/blast/Makefile
327709 biology/blat/Makefile
327709 biology/boinc-simap/Makefile
327709 biology/chemeq/Makefile

(Only the first 10 of 94 ports in this commit are shown above. View all ports for this commit)
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
Wed, 19 Jun 2013
[ 16:36 bsam ] Original commit   Revision:321290
321290 biology/sim4/Makefile
. add license (GPLv2);
. bump PORTREVISION;
. trim article from COMMENT;
. trim Makefile headers.
Wed, 3 May 2006
[ 23:26 edwin ] Original commit 
1.16 benchmarks/bonnie++/Makefile
1.5 benchmarks/hpl/Makefile
1.4 benchmarks/netio/Makefile
1.4 benchmarks/pathchirp/Makefile
1.11 benchmarks/postal/Makefile
1.3 benchmarks/scimark2c/Makefile
1.13 benchmarks/tmetric/Makefile
1.20 biology/L-Breeder/Makefile
1.2 biology/ariadne/Makefile
1.19 biology/avida/Makefile

(Only the first 10 of 28 ports in this commit are shown above. View all ports for this commit)
Remove USE_REINPLACE from all categories starting with B
Fri, 12 Mar 2004
[ 13:53 krion ] Original commit 
1.11 biology/sim4/Makefile
1.10 biology/sim4/distinfo
1.3 biology/sim4/files/patch-aa
1.4 biology/sim4/pkg-descr
- Update to version 2003.09.21

PR:             ports/64160
Submitted by:   Liam J. Foy <liamfoy@sepulcrum.org>
Thu, 5 Feb 2004
[ 20:38 trevor ] Original commit 
1.10 archivers/9e/Makefile
1.2 archivers/9e/pkg-plist
1.10 archivers/cabextract/Makefile
1.2 archivers/cabextract/pkg-plist
1.4 archivers/hffzip/Makefile
1.2 archivers/hffzip/pkg-plist
1.2 archivers/jzip.org/Makefile
1.2 archivers/jzip.org/pkg-plist
1.10 archivers/lzop/Makefile
1.2 archivers/lzop/pkg-plist

(Only the first 10 of 804 ports in this commit are shown above. View all ports for this commit)
Use PLIST_FILES.

Reviewed by:    marcus
Sun, 2 Nov 2003
[ 02:48 edwin ] Original commit 
1.10 benchmarks/tmetric/Makefile
1.5 biology/biojava/Makefile
1.9 biology/sim4/Makefile
1.3 chinese/gb2jis/Makefile
1.3 chinese/jis2gb/Makefile
1.2 deskutils/ljcharm/Makefile
1.8 devel/entity/Makefile
1.7 editors/vilearn/Makefile
1.9 games/gleyes/Makefile
1.33 games/nethack33-nox11/Makefile

(Only the first 10 of 40 ports in this commit are shown above. View all ports for this commit)
ports with possibly unreachable MAINTAINERs
*** addresses that seem to be dead:

PR:             ports/58694
Submitted by:   Oliver Eikemeier <eikemeier@fillmore-labs.com>
Fri, 21 Feb 2003
[ 11:01 knu ] Original commit 
1.4 biology/L-Breeder/Makefile
1.2 biology/L-Breeder/pkg-comment
1.2 biology/act/Makefile
1.2 biology/act/pkg-comment
1.2 biology/artemis/Makefile
1.2 biology/artemis/pkg-comment
1.4 biology/avida/Makefile
1.2 biology/avida/pkg-comment
1.4 biology/biojava/Makefile
1.2 biology/biojava/pkg-comment

(Only the first 10 of 72 ports in this commit are shown above. View all ports for this commit)
De-pkg-comment.
Sat, 4 May 2002
[ 21:45 kris ] Original commit 
1.7 biology/sim4/Makefile
1.8 biology/sim4/distinfo
Update to sim4-2002.03.03 to unbreak build.

Noticed by:     bento
Fri, 25 Jan 2002
[ 13:33 wjv ] Original commit 
unknown biology/sim4/Makefile
unknown biology/sim4/distinfo
- Update to version of 2001-12-30    
Sun, 16 Dec 2001
[ 19:36 steve ] Original commit 
unknown biology/sim4/Makefile
unknown biology/sim4/distinfo
Update to version 2001.10.12.    
Mon, 19 Feb 2001
[ 12:32 jeh ] Original commit 
unknown biology/sim4/Makefile
unknown biology/sim4/distinfo
Update to version 2001-02-06    
Thu, 26 Oct 2000
[ 11:19 jeh ] Original commit 
unknown biology/sim4/Makefile
unknown biology/sim4/distinfo
unknown biology/sim4/pkg-descr
Update biology/sim4 to 2000.10.19   Maintainership over to FreeBSD bio-porters
mailing list    
Mon, 4 Sep 2000
[ 03:44 kevlo ] Original commit 
unknown biology/sim4/Makefile
unknown biology/sim4/files/md5
unknown biology/sim4/patches/patch-aa
unknown biology/sim4/pkg/DESCR
Update to version 2000.08.24    
Thu, 27 Jul 2000
[ 15:33 nbm ] Original commit 
unknown biology/sim4/Makefile
unknown biology/sim4/files/md5
unknown biology/sim4/patches/patch-aa
unknown biology/sim4/pkg/COMMENT
unknown biology/sim4/pkg/DESCR
unknown biology/sim4/pkg/PLIST
Add sim4, an implementation of the sim4 algorithm for aligning expressed   DNA
with genomic sequences    

Number of commits found XX: 15

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