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non port: biology/ssaha/Makefile
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Number of commits found: 12

Fri, 13 Oct 2017
[ 11:14 bapt ] Original commit   Revision:451982
451982 biology/ariadne/Makefile
451982 biology/biococoa/Makefile
451982 biology/crux/Makefile
451982 biology/plink/Makefile
451982 biology/ssaha/Makefile
451982 biology/tRNAscan-SE/Makefile
Mark as broken ports with no public distfiles
Sun, 10 Sep 2017
[ 20:55 gerald ] Original commit   Revision:449591
449591 accessibility/atkmm/Makefile
449591 archivers/brotli/Makefile
449591 archivers/c-blosc/Makefile
449591 archivers/kf5-karchive/Makefile
449591 archivers/libpar2/Makefile
449591 archivers/paq/Makefile
449591 archivers/pxz/Makefile
449591 archivers/py-brotli/Makefile
449591 archivers/rvm/Makefile
449591 astro/geographiclib/Makefile

(Only the first 10 of 1201 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISION for ports depending on the canonical version of GCC
(via Mk/bsd.default-versions.mk and lang/gcc) which has moved from
GCC 5.4 to GCC 6.4 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++11-lang,
   c++14-lang, c++0x, c11, or gcc-c++11-lib.

PR:		219275
Sat, 1 Apr 2017
[ 15:23 gerald ] Original commit   Revision:437439
437439 archivers/kf5-karchive/Makefile
437439 archivers/paq/Makefile
437439 archivers/pxz/Makefile
437439 archivers/py-brotli/Makefile
437439 archivers/rvm/Makefile
437439 astro/geographiclib/Makefile
437439 astro/gpstk/Makefile
437439 astro/kstars/Makefile
437439 astro/libosmium/Makefile
437439 astro/nightfall/Makefile

(Only the first 10 of 1118 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISIONs for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.9.4 to GCC 5.4 (at least under some
circumstances such as versions of FreeBSD or platforms).

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using using Mk/bsd.octave.mk which in turn has USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++14-lang,
   c++11-lang, c++0x, c11, or gcc-c++11-lib.

PR:		216707
Sun, 20 Nov 2016
[ 09:38 gerald ] Original commit   Revision:426566
426566 archivers/paq/Makefile
426566 archivers/pxz/Makefile
426566 astro/gpstk/Makefile
426566 audio/codec2/Makefile
426566 audio/csound/Makefile
426566 audio/deadbeef/Makefile
426566 audio/firefly/Makefile
426566 audio/funktrackergold/Makefile
426566 audio/idjc/Makefile
426566 audio/libsoxr/Makefile

(Only the first 10 of 364 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISIONS for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.8.5 to GCC 4.9.4 (at least under some
circumstances such as versions of FreeBSD or platforms).

In particular that is ports with USE_GCC=yes, USE_GCC=any, or one of
gcc-c++11-lib, openmp, nestedfct, c++11-lib as well as c++14-lang,
c++11-lang, c++0x, c11 requested via USES=compiler.
Sat, 20 Dec 2014
[ 17:27 bapt ] Original commit   Revision:375014
375014 biology/avida/Makefile
375014 biology/blat/Makefile
375014 biology/linux-foldingathome/Makefile
375014 biology/povchem/Makefile
375014 biology/seaview/Makefile
375014 biology/ssaha/Makefile
375014 biology/wise/Makefile
Cleanup plist
Sun, 9 Mar 2014
[ 09:39 rene ] Original commit   Revision:347560
347560 biology/ssaha/Makefile
biology/ssaha: undeprecate, this port fetches and builds fine.

Submitted by:	Kurt Jaeger via private mail.
Fri, 7 Feb 2014
[ 18:50 bapt ] Original commit   Revision:343287
343287 archivers/bzip/Makefile
343287 archivers/liblzxcomp/Makefile
343287 astro/rmap/Makefile
343287 astro/sunclock/Makefile
343287 audio/asmix/Makefile
343287 audio/asmixer/Makefile
343287 audio/beep/Makefile
343287 audio/fmio/Makefile
343287 audio/oggsplit/Makefile
343287 audio/py-xmms/Makefile

(Only the first 10 of 44 ports in this commit are shown above. View all ports for this commit)
Deprecate ports unmaintained for which distillator is not able to find public
distfiles

Reported by:	distilator
Sat, 25 Jan 2014
[ 16:48 miwi ] Original commit   Revision:341053
341053 biology/ssaha/Makefile
341053 biology/ssaha/files/patch-GlobalDefinitions.h
341053 biology/ssaha/files/patch-SSAHAMain.h
341053 biology/ssaha/files/patch-makefile
341053 biology/ssaha/pkg-descr
341053 biology/ssaha/pkg-plist
- Fix build on -current
- Update MASTER_SITES and WWW: line
- Support CXX/CXXFLAGS properly
- Support PLIST_FILES
- Stage support

PR:		184852
Submitted by:	Ports Fury
Fri, 20 Sep 2013
[ 15:55 bapt ] Original commit   Revision:327709
327709 biology/ariadne/Makefile
327709 biology/artemis/Makefile
327709 biology/avida/Makefile
327709 biology/babel/Makefile
327709 biology/biococoa/Makefile
327709 biology/biojava/Makefile
327709 biology/blast/Makefile
327709 biology/blat/Makefile
327709 biology/boinc-simap/Makefile
327709 biology/chemeq/Makefile

(Only the first 10 of 94 ports in this commit are shown above. View all ports for this commit)
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
Mon, 1 Oct 2012
[ 14:45 tabthorpe ] Original commit   Revision:305130
305130 biology/ariadne/Makefile
305130 biology/artemis/Makefile
305130 biology/belvu/Makefile
305130 biology/blast/Makefile
305130 biology/blat/Makefile
305130 biology/dotter/Makefile
305130 biology/embassy/Makefile
305130 biology/emboss/Makefile
305130 biology/fasta3/Makefile
305130 biology/finchtv/Makefile

(Only the first 10 of 47 ports in this commit are shown above. View all ports for this commit)
- Reassign to the heap at maintainer's request
Sat, 21 Jun 2008
[ 02:46 lippe ] Original commit 
1.2 biology/ssaha/Makefile
- Fix plist files installation.
- Bump PORTREVISION.

Reported by:    QA Tindy
Approved by:    gabor (mentor, implicit)
[ 00:01 lippe ] Original commit 
1.102 biology/Makefile
1.1 biology/ssaha/Makefile
1.1 biology/ssaha/distinfo
1.1 biology/ssaha/files/patch-GlobalDefinitions.cpp
1.1 biology/ssaha/files/patch-GlobalDefinitions.h
1.1 biology/ssaha/files/patch-HashTable.cpp
1.1 biology/ssaha/files/patch-HashTableGeneric.cpp
1.1 biology/ssaha/files/patch-HashTablePacked.cpp
1.1 biology/ssaha/files/patch-HashTablePacked.h
1.1 biology/ssaha/files/patch-HashTableTranslated.cpp

(Only the first 10 of 36 ports in this commit are shown above. View all ports for this commit)
SSAHA is a software tool for very fast matching and alignment of DNA
sequences. It stands for Sequence Search and Alignment by Hashing
Algorithm. It achieves its fast search speed by converting sequence
information into a `hash table' data structure, which can then be
searched very rapidly for matches.

WWW: http://www.sanger.ac.uk/Software/analysis/SSAHA/

PR:             ports/124525
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar>
Approved by:    gabor (mentor, implicit)

Number of commits found: 12

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