notbugAs an Amazon Associate I earn from qualifying purchases.
Want a good read? Try FreeBSD Mastery: Jails (IT Mastery Book 15)

Current status

The server has been repaired, with a new power supply, for $23. I am waiting for lower COVID rates before visiting the datacenter to return it.
non port: biology/tRNAscan-SE/Makefile
SVNWeb

Number of commits found XX: 20

Mon, 13 Jan 2020
[ 17:36 fernape ] Original commit   Revision:522898
522898 biology/tRNAscan-SE/Makefile
522898 biology/tRNAscan-SE/distinfo
biology/tRNAscan-SE: update to 2.0.5

This commit also changes maintainer's email.

PR:	243248
Submitted by:	mzaki@e-mail.ne.jp (maintainer)
Sat, 8 Jun 2019
[ 01:31 swills ] Original commit   Revision:503695
503695 biology/tRNAscan-SE/Makefile
503695 biology/tRNAscan-SE/distinfo
503695 biology/tRNAscan-SE/files/patch-tRNAscan-SE.src
biology/tRNAscan-SE: Update to 2.0.3

PR:		238253
Submitted by:	Motomichi Matsuzaki <mzaki@niid.go.jp>
Thu, 30 May 2019
[ 07:39 pkubaj ] Original commit   Revision:503045
503045 biology/tRNAscan-SE/Makefile
biology/tRNAscan-SE: fix build with GCC-based architecturs

Add MAKE_JOBS_UNSAFE=yes to fix build.

Remove USES=compiler:c11, it's not necessary.

PR:		237848
Approved by:	mzaki@niid.go.jp (maintainer), linimon (mentor)
Differential Revision:	https://reviews.freebsd.org/D20439
Tue, 7 May 2019
[ 19:45 pkubaj ] Original commit   Revision:500976
500976 biology/tRNAscan-SE/Makefile
biology/tRNAscan-SE: fix build with GCC-based architectures

Add USES=compiler:c11 to fix build.

Approved by:	mentors (implicit approval)
Fri, 28 Sep 2018
[ 00:12 wen ] Original commit   Revision:480837
480837 biology/tRNAscan-SE/Makefile
480837 biology/tRNAscan-SE/pkg-plist
- Unbreak by adding missing pkg-plist

PR:		228758
Submitted by:	mzaki@niid.go.jp(maintainer)
Fri, 29 Jun 2018
[ 12:43 antoine ] Original commit   Revision:473544
473544 biology/tRNAscan-SE/Makefile
Mark BROKEN: missing plist
Wed, 6 Jun 2018
[ 15:20 krion ] Original commit   Revision:471852
471852 biology/tRNAscan-SE/Makefile
471852 biology/tRNAscan-SE/distinfo
471852 biology/tRNAscan-SE/files/patch-Makefile
471852 biology/tRNAscan-SE/files/patch-Makefile.am
471852 biology/tRNAscan-SE/files/patch-configure.ac
471852 biology/tRNAscan-SE/files/patch-sqio.c
471852 biology/tRNAscan-SE/files/patch-tRNAscan-SE.src
471852 biology/tRNAscan-SE/pkg-descr
Update to 2.0.0 and pass maintainership to committer.

PR:		228758
Submitted by:	Motomichi Matsuzaki <mzaki@niid.go.jp>
Sat, 5 May 2018
[ 10:49 antoine ] Original commit   Revision:469100
469100 audio/abcmidi/Makefile
469100 audio/deforaos-mixer/Makefile
469100 audio/gkrellmss2/Makefile
469100 audio/jxm/Makefile
469100 audio/kaudiocreator/Makefile
469100 audio/linux-genpuid/Makefile
469100 audio/ogg2mp3/Makefile
469100 audio/xmmix/Makefile
469100 audio/xmms-timidity/Makefile
469100 benchmarks/netpipe/Makefile

(Only the first 10 of 42 ports in this commit are shown above. View all ports for this commit)
Deprecate ports broken for more than 6 months
Fri, 13 Oct 2017
[ 11:14 bapt ] Original commit   Revision:451982
451982 biology/ariadne/Makefile
451982 biology/biococoa/Makefile
451982 biology/crux/Makefile
451982 biology/plink/Makefile
451982 biology/ssaha/Makefile
451982 biology/tRNAscan-SE/Makefile
Mark as broken ports with no public distfiles
Tue, 29 Jul 2014
[ 19:11 adamw ] Original commit   Revision:363374
363374 archivers/ha/Makefile
363374 archivers/unalz/Makefile
363374 astro/gpsman/Makefile
363374 audio/amrcoder/Makefile
363374 audio/chordpack/Makefile
363374 audio/cmt/Makefile
363374 audio/enscribe/Makefile
363374 audio/funktrackergold/Makefile
363374 audio/ladspa/Makefile
363374 audio/libconvolve/Makefile

(Only the first 10 of 436 ports in this commit are shown above. View all ports for this commit)
Convert a bunch of EXTRACT_SUFX=... into USES=tar:...

Approved by:	portmgr (not really, but touches unstaged ports)
Mon, 5 May 2014
[ 10:26 bapt ] Original commit   Revision:352989
352989 biology/tRNAscan-SE/Makefile
Support stage
Fri, 20 Sep 2013
[ 15:55 bapt ] Original commit   Revision:327709
327709 biology/ariadne/Makefile
327709 biology/artemis/Makefile
327709 biology/avida/Makefile
327709 biology/babel/Makefile
327709 biology/biococoa/Makefile
327709 biology/biojava/Makefile
327709 biology/blast/Makefile
327709 biology/blat/Makefile
327709 biology/boinc-simap/Makefile
327709 biology/chemeq/Makefile

(Only the first 10 of 94 ports in this commit are shown above. View all ports for this commit)
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
Sat, 3 Aug 2013
[ 08:45 az ] Original commit   Revision:324181
324181 astro/gpsdrive/Makefile
324181 astro/nightfall/Makefile
324181 audio/cue2toc/Makefile
324181 audio/fdmf/Makefile
324181 audio/gnupod/Makefile
324181 audio/ices0/Makefile
324181 audio/mp3mover/Makefile
324181 audio/mp3riot/Makefile
324181 audio/zinf/Makefile
324181 biology/hmmer/Makefile

(Only the first 10 of 140 ports in this commit are shown above. View all ports for this commit)
- Convert to new perl framework
- Trim Makefile header
Wed, 19 Jun 2013
[ 19:20 bsam ] Original commit   Revision:321314
321314 biology/tRNAscan-SE/Makefile
321314 biology/tRNAscan-SE/pkg-plist
. NOPORTDOCS -> PORT_OPTIONS:MDOCS;
. pet portlint: use {} instaed of () at variable;
. use PLIST_FILES, PORTDATA and PORTDOCS at Makefile;
. get rid of pkg-plist;
. remove article from COMMENT;
. trim Makefile headers.
Thu, 22 May 2008
[ 00:49 miwi ] Original commit 
1.6 biology/tRNAscan-SE/Makefile
1.2 biology/tRNAscan-SE/files/patch-aa
1.2 biology/tRNAscan-SE/pkg-descr
1.3 biology/tRNAscan-SE/pkg-plist
- Update MASTER_SITES and WWW: line
- Support CC/CFLAGS properly
- Strip binary

PR:             123866
Submitted by:   Ports Fury
Thu, 15 May 2008
[ 02:50 erwin ] Original commit 
1.5 biology/tRNAscan-SE/Makefile
1.4 biology/tRNAscan-SE/distinfo
Update to 1.23
Sat, 10 Mar 2007
[ 20:20 linimon ] Original commit 
1.9 biology/gff2ps/Makefile
1.4 biology/tRNAscan-SE/Makefile
Reset chuynh@biolateral.com.au: address bounces.

Hat:            portmgr
Fri, 21 Feb 2003
[ 11:01 knu ] Original commit 
1.4 biology/L-Breeder/Makefile
1.2 biology/L-Breeder/pkg-comment
1.2 biology/act/Makefile
1.2 biology/act/pkg-comment
1.2 biology/artemis/Makefile
1.2 biology/artemis/pkg-comment
1.4 biology/avida/Makefile
1.2 biology/avida/pkg-comment
1.4 biology/biojava/Makefile
1.2 biology/biojava/pkg-comment

(Only the first 10 of 72 ports in this commit are shown above. View all ports for this commit)
De-pkg-comment.
Mon, 4 Nov 2002
[ 01:47 edwin ] Original commit 
1.2 biology/tRNAscan-SE/Makefile
Port needs perl to build.
Seen on: bento
Wed, 27 Mar 2002
[ 14:18 wjv ] Original commit 
1.46 biology/Makefile
1.1 biology/tRNAscan-SE/Makefile
1.1 biology/tRNAscan-SE/distinfo
1.1 biology/tRNAscan-SE/files/patch-aa
1.1 biology/tRNAscan-SE/pkg-comment
1.1 biology/tRNAscan-SE/pkg-descr
1.1 biology/tRNAscan-SE/pkg-plist
Add tRNAscan-SE 1.21, an improved tool for transfer RNA detection.

PR:             33853
Submitted by:   chuynh@biolateral.com.au

Number of commits found XX: 20

Login
User Login
Create account

Servers and bandwidth provided by
New York Internet, iXsystems, and RootBSD

This site
What is FreshPorts?
About the authors
Issues
FAQ
How big is it?
The latest upgrade!
Privacy
Blog
Contact

Search
Enter Keywords:
 
more...

Latest Vulnerabilities
redisFeb 23
redis-develFeb 23
redis5Feb 23
zeekFeb 22
jenkinsFeb 20
raptor2Feb 20
asterisk13Feb 18
asterisk13Feb 18
asterisk13Feb 18
asterisk16Feb 18
asterisk16Feb 18
asterisk16Feb 18
asterisk16Feb 18
asterisk16Feb 18
asterisk18Feb 18

15 vulnerabilities affecting 114 ports have been reported in the past 14 days

* - modified, not new

All vulnerabilities

Last updated:
2021-02-25 03:33:54


Ports
Home
Categories
Deleted ports
Sanity Test Failures
Newsfeeds

Statistics
Graphs
NEW Graphs (Javascript)
Traffic

Calculated hourly:
Port count 42610
Broken 76
Deprecated 173
Ignore 316
Forbidden 4
Restricted 139
No CDROM 71
Vulnerable 21
Expired 37
Set to expire 148
Interactive 0
new 24 hours 7
new 48 hours10
new 7 days38
new fortnight74
new month151

Servers and bandwidth provided by
New York Internet, iXsystems, and RootBSD
Valid HTML, CSS, and RSS.
Copyright © 2000-2021 Dan Langille. All rights reserved.