non port: biology/t_coffee/Makefile |
Number of commits found: 38 |
Saturday, 4 Apr 2020
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20:51 antoine
Deprecate ports broken for more than 6 months
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Wednesday, 6 Nov 2019
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12:48 antoine
Mark a few ports BROKEN, unfetchable
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Friday, 26 Jul 2019
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20:46 gerald
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.
PR: 238330
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Monday, 22 Apr 2019
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13:16 gerald
Related to revision 499061 bump ports with USES=fortran to have them
benefit from the improved situation where libgcc_s is only used when
absolutely necessary.
Suggested by: tijl
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Wednesday, 12 Dec 2018
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01:35 gerald
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.
PR: 231590
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Sunday, 29 Jul 2018
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22:18 gerald
Bump PORTREVISION for ports depending on the canonical version of GCC
in the ports tree (via Mk/bsd.default-versions.mk and lang/gcc) which
has now moved from GCC 6 to GCC 7 by default.
This includes ports
- featuring USE_GCC=yes or USE_GCC=any,
- featuring USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and those
- with USES=compiler specifying one of openmp, nestedfct, c11, c++0x,
c++11-lib, c++11-lang, c++14-lang, c++17-lang, or gcc-c++11-lib.
PR: 222542
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Saturday, 10 Mar 2018
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17:46 gerald
Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079).
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Sunday, 10 Sep 2017
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20:55 gerald
Bump PORTREVISION for ports depending on the canonical version of GCC
(via Mk/bsd.default-versions.mk and lang/gcc) which has moved from
GCC 5.4 to GCC 6.4 under most circumstances.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c++11-lib, c++11-lang,
c++14-lang, c++0x, c11, or gcc-c++11-lib.
PR: 219275
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Saturday, 1 Apr 2017
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15:23 gerald
Bump PORTREVISIONs for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.9.4 to GCC 5.4 (at least under some
circumstances such as versions of FreeBSD or platforms).
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using using Mk/bsd.octave.mk which in turn has USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c++11-lib, c++14-lang,
c++11-lang, c++0x, c11, or gcc-c++11-lib.
PR: 216707
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Wednesday, 7 Dec 2016
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13:24 gerald
Bump PORTREVISIONS for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.8.5 to GCC 4.9.4 (at least under some
circumstances such as versions of FreeBSD or platforms), part II.
The first part covered ports with USE_GCC=yes, USE_GCC=any, or one of
gcc-c++11-lib, openmp, nestedfct, c++11-lib as well as c++14-lang,
c++11-lang, c++0x, c11 requested via USES=compiler.
This adds ports with USES=fortran and ports using Mk/bsd.octave.mk
which in turn has USES=fortran.
PR: 214965
Reported by: thierry
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Friday, 1 Apr 2016
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13:29 mat
Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.
With hat: portmgr
Sponsored by: Absolight
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Thursday, 14 May 2015
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10:15 mat
MASTER_SITES cleanup.
- Replace ${MASTER_SITE_FOO} with FOO.
- Merge MASTER_SITE_SUBDIR into MASTER_SITES when possible. (This means 99.9%
of the time.)
- Remove occurrences of MASTER_SITE_LOCAL when no subdirectory was present and
no hint of what it should be was present.
- Fix some logic.
- And generally, make things more simple and easy to understand.
While there, add magic values to the FESTIVAL, GENTOO, GIMP, GNUPG, QT and
SAMBA macros.
Also, replace some EXTRACT_SUFX occurences with USES=tar:*.
Checked by: make fetch-urlall-list
With hat: portmgr
Sponsored by: Absolight
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Wednesday, 10 Sep 2014
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20:50 gerald
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.
Part II, Bump PORTREVISIONs.
PR: 192025
Tested by: antoine (-exp runs)
Approved by: portmgr (implicit)
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Monday, 9 Jun 2014
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11:21 olgeni
Remove indefinite articles and trailing periods from COMMENT, plus
minor COMMENT typos and surrounding whitespace fixes. Categories A-C.
CR: D196
Approved by: portmgr (bapt)
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Monday, 10 Mar 2014
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20:55 gerald
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3. This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.
Part II, Bump PORTREVISIONs.
PR: 182136
Supported by: Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by: bdrewery (two -exp runs)
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Wednesday, 18 Dec 2013
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17:24 tijl
USES=fortran, staging.
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Saturday, 26 Oct 2013
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00:52 gerald
Update to libmpc version 1.0.1 which brings the following fixes:
- Switched to automake 1.11.6, see CVE-2012-3386.
- #14669: Fixed extraction of CC from gmp.h.
- Fixed case of intermediate zero real or imaginary part in mpc_fma,
found by hydra with GMP_CHECK_RANDOMIZE=1346362345.
This is on top of the following changes from version 1.0
- Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
invariant sections) for the documentation.
- 100% of all lines are covered by tests
- Renamed functions
. mpc_mul_2exp to mpc_mul_2ui
. mpc_div_2exp to mpc_div_2ui
- 0^0, which returned (NaN,NaN) previously, now returns (1,+0).
- Removed compatibility with K&R compilers, which was untestable due
to lack of such compilers.
- New functions
. mpc_log10
. mpc_mul_2si, mpc_div_2si
- Speed-ups
. mpc_fma
- Bug fixes
. mpc_div and mpc_norm now return a value indicating the effective
rounding direction, as the other functions.
. mpc_mul, mpc_sqr and mpc_norm now return correct results even if
there are over- or underflows during the computation.
. mpc_asin, mpc_proj, mpc_sqr: Wrong result when input variable has
infinite part and equals output variable is corrected.
. mpc_fr_sub: Wrong return value for imaginary part is corrected.
Convert to the new LIB_DEPENDS standard and remove hard-coded
.so versions from a couple of dependent ports.
Bump PORTREVISIONS of all dependent ports.
PR: 183141
Approved by: portmgr (bdrewery)
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Friday, 20 Sep 2013
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15:55 bapt
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
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Wednesday, 14 Aug 2013
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22:35 ak
- Remove MAKE_JOBS_SAFE variable
Approved by: portmgr (bdrewery)
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Monday, 14 Jan 2013
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08:04 araujo
- Update to 9.03.
PR: ports/172499
Submitted by: KATO Tsuguru <tkato432@yahoo.com>
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Monday, 1 Oct 2012
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14:45 tabthorpe
- Reassign to the heap at maintainer's request
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Sunday, 10 Jun 2012
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18:42 swills
- Convert all remaining instances of BUILD_DEPENDS=${RUN_DEPENDS} or
RUN_DEPENDS=${BUILD_DEPENDS} to use := which portlint has warned
about for a while.
PR: ports/168208
Approved by: portmgr (miwi)
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Tuesday, 9 Sep 2008
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13:43 gahr
- Respect PORTDOCS/PORTEXAMPLES
Reported by: QA Tindie
Approved by: portmgr
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Saturday, 5 Apr 2008
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10:47 rafan
- Update to 5.68
- Remove gcc version restriction
PR: ports/122435
Submitted by: Fernan Aguero <fernan at iib.unsam.edu.ar> (maintainer)
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Wednesday, 2 May 2007
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07:15 edwin
[patch] cleanup non-supported FreeBSD versions
PR: ports/111728
Submitted by: Edwin Groothuis <edwin@mavetju.org>
Approved by: maintainer timeout
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Friday, 9 Mar 2007
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11:26 miwi
- Update to 4.96
PR: 110080
Submitted by: Fernan Aguero<fernan@iib.unsam.edu.ar> (maintainer)
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Monday, 22 Jan 2007
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23:22 rafan
- Project moves to a new home. Change MASTER_SITES and WWW
PR: ports/108214
Submitted by: Thomas Abthorpe <thomas at goodking.ca>
Approved by: Fernan Aguero <fernan at iib.unsam.edu.ar> (maintainer)
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Friday, 10 Feb 2006
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09:45 lawrance
Update to 3.27.
Use GCC 3.3 on systems with 3.4, due to an internal compiler error.
PR: ports/93050
Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
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Tuesday, 6 Dec 2005
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15:10 tdb
- Update to 3.18 to make fetchable again
- Mark broken on 6.x upwards
PR: 89977
Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
Approved by: clement (mentor)
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Friday, 28 Oct 2005
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06:32 kris
BROKEN: Unfetchable
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Tuesday, 11 Oct 2005
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20:47 sem
Forced commit to note the port was updated to 3.14 not 3.13
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20:44 sem
- Update to 3.13. It fixes fetching.
PR: ports/87264
Submitted by: maintainer
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Thursday, 25 Nov 2004
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23:03 sem
- Update to 2.03
- Pass maintainership to submitter
PR: ports/74332
Submitted by: Fernan Aguero <fernan(at)iib.unsam.edu.ar>
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Saturday, 20 Nov 2004
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08:09 linimon
With portmgr hat on, reset inactive maintainer. These ports are now up
for adoption.
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Thursday, 22 Jan 2004
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12:18 trevor
Use the CPIO macro defined in bsd.port.mk.
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Thursday, 13 Nov 2003
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14:45 trevor
Use the FIND and XARGS macros introduced in bsd.port.mk 1.391.
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Friday, 7 Mar 2003
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05:56 ade
Clear moonlight beckons.
Requiem mors pacem pkg-comment,
And be calm ports tree.
E Nomini Patri, E Fili, E Spiritu Sancti.
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Friday, 25 Jan 2002
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14:58 wjv
Add t_coffee 1.37, a multiple DNA or protein sequence alignment package.
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Number of commits found: 38 |