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non port: biology/tophat/distinfo
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Number of commits found: 1

Fri, 27 Sep 2019
[ 00:49 jwb search for other commits by this committer ] Original commit   Revision:512997 (Only the first 10 of 11 ports in this commit are shown above. View all ports for this commit)
biology/tophat: Fast splice junction mapper for RNA-Seq reads

TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq
reads to mammalian-sized genomes using the ultra high-throughput short read
aligner Bowtie, and then analyzes the mapping results to identify splice
junctions between exons.

Note:

TopHat has been Superseded by HISAT2 and is no longer maintained upstream.
This port is provided mainly for revisiting old studies where TopHat was used.

Number of commits found: 1