| non port: biology/ucsc-userapps/Makefile |
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SVNWeb
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Number of commits found: 5 |
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Mon, 25 Oct 2021
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[ 12:58 Alexey Dokuchaev (danfe)  ]  61b6613 (Only the first 10 of 79 ports in this commit are shown above.  )
Style: improve ONLY_FOR_ARCHS_REASON (grammar, markup, etc.)
ONLY_FOR_ARCHS_REASON is used as part of the sentence and thus should
start with lower-case letter and not end with a period which is added
by the framework, similar to other knobs like BROKEN, IGNORE, et al.
While here, remove needless quoting, add missing Oxford comma, expand
contractions and jargonisms, use correct spelling for proper names.
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Fri, 24 Sep 2021
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[ 21:53 Jason W. Bacon (jwb) ] d94f19a
biology/ucsc-userapps: Add "kent" command in ${PREFIX}/bin
Standard kent userapps commands are installed under ${PREFIX}/userapps
because of multiple conflicts. The kent command turns the standard
commands into subcommands, so no special PATH is needed.
/usr/local/ucsc-userapps/bin/bigWigToBedGraph [args]
can be run as
kent bigWigToBedGraph [args]
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Sat, 15 May 2021
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[ 15:23 Jason W. Bacon (jwb) ] 43397d1
biology/ucsc-userapps: Update to v414
Update license message. Confirmed via conversation with UCSC that some
proprietary code is used in the "free" tools build. UCSC is working on it.
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Thu, 6 May 2021
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[ 11:47 Mathieu Arnold (mat) ] adb9312 (Only the first 10 of 61 ports in this commit are shown above. )
Deorbit RESTRICTED && NO_CDROM, part one.
For ports that already use the licenses framwork, merge the content of
RESTRICTED/NO_CDROM/LEGAL* entries into LICENSEs.
Approved by: rene
Differential Revision: https://reviews.freebsd.org/D30010
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Sun, 25 Apr 2021
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[ 17:18 Jason W. Bacon (jwb) ] 6b63ef7 (Only the first 10 of 13 ports in this commit are shown above. )
biology/ucsc-userapps: Command line tools from the UCSC Genome Browser project
These are the command-line bioinformatics utilities associated with the UCSC
genome browser. Care has been taken to install only the freely available
tools. However, the license information at https://genome.ucsc.edu/license/
is not entirely clear and we may add non-free utilities in the future.
Contact UCSC if you are using this port for commercial purposes.
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Number of commits found: 5 |
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