| non port: biology/ugene/pkg-plist |
|
SVNWeb
|
Number of commits found XX: 18 |
|
Thu, 31 Dec 2020
|
[ 13:43 danfe ]  
559737 biology/ugene/Makefile
559737 biology/ugene/distinfo
559737 biology/ugene/files/patch-src_corelibs_U2Designer_src_WorkflowGUIUtils.cpp
559737 biology/ugene/files/patch-src_corelibs_U2Gui_src_util_GUIUtils.cpp
559737 biology/ugene/files/patch-src_corelibs_U2View_src_ov__sequence_Overview.cpp
559737 biology/ugene/files/patch-src_libs__3rdparty_QSpec_src_drivers_GTKeyboardDriverLinux.cpp
559737 biology/ugene/files/patch-src_libs__3rdparty_QSpec_src_drivers_GTMouseDriverLinux.cpp
559737 biology/ugene/files/patch-src_plugins__checker_src_Main.cpp
559737 biology/ugene/files/patch-src_ugenecl_src_Main.cpp
559737 biology/ugene/files/patch-src_ugeneui_src_Main.cpp
(Only the first 10 of 13 ports in this commit are shown above.  )
- Update Unipro UGENE port to version 37.0
- Drop no longer used WebEngine dependencies
- Force SSE2 on i386 (required for the build)
- Chase HTTP 301 redirection in the WWW line
|
|
Sun, 10 May 2020
|
[ 15:42 danfe ]
534852 MOVED
534852 biology/Makefile
534852 biology/ugene
534852 biology/ugene/Makefile
534852 biology/ugene/distinfo
534852 biology/ugene/files/patch-git_578c949
534852 biology/ugene/files/patch-src_plugins_test__runner_src_Reporter.ui
534852 biology/ugene/pkg-plist
- Resurrect and unbreak by updating to version 34.0
- Stop providing outdated offline PDF documentation,
users are advised to use the online files instead
|
|
Sun, 2 Sep 2018
|
[ 20:47 jhale ]
478818 biology/ugene/Makefile
478818 biology/ugene/distinfo
478818 biology/ugene/files/patch-git_279756e4
478818 biology/ugene/files/patch-git_578c949
478818 biology/ugene/files/patch-src_corelibs_U2Private_U2Private.pro
478818 biology/ugene/files/patch-src_libs__3rdparty_QSpec_src_drivers_GTKeyboardDriverLinux.cpp
478818 biology/ugene/files/patch-src_libs__3rdparty_QSpec_src_drivers_GTMouseDriverLinux.cpp
478818 biology/ugene/files/patch-src_libs__3rdparty_samtools_samtools.pri
478818 biology/ugene/files/patch-src_plugins__3rdparty_phylip_src_phylip.h
478818 biology/ugene/files/patch-src_plugins__3rdparty_umuscle_src_MuscleWorkPool.cpp
(Only the first 10 of 17 ports in this commit are shown above. )
Update to 1.31.0
PR: 229463
Approved by: Hannes Hauswedell <h2+fbsdports@fsfe.org> (maintainer)
|
|
Thu, 14 Apr 2016
|
[ 04:07 danfe ]
413242 biology/ugene/Makefile
413242 biology/ugene/distinfo
413242 biology/ugene/files
413242 biology/ugene/files/patch-src_corelibs_U2Private_U2Private.pro
413242 biology/ugene/files/patch-src_plugins__3rdparty_umuscle_src_MuscleWorkPool.cpp
413242 biology/ugene/files/patch-src_plugins__checker_src_Main.cpp
413242 biology/ugene/files/patch-src_ugenecl_src_Main.cpp
413242 biology/ugene/files/patch-src_ugeneui_src_Main.cpp
413242 biology/ugene/files/patch-ugene.pro
413242 biology/ugene/pkg-plist
Update to version 1.22.0, which now unfortunately requires Qt 5.x. Also
since around v1.18.0, UGENE is using Google's Breakpad library for crash
reporting, which is very system-specific and does not support FreeBSD at
the moment. Due to lack of resources and interest in porting it, simply
disable crash reporting code for the time being.
|
|
Thu, 28 May 2015
|
[ 08:12 danfe ]
387709 biology/ugene/Makefile
387709 biology/ugene/distinfo
387709 biology/ugene/pkg-plist
Update Unipro UGENE to version 1.16.2.
|
|
Mon, 23 Mar 2015
|
[ 01:44 danfe ]
381974 biology/ugene/Makefile
381974 biology/ugene/distinfo
381974 biology/ugene/pkg-plist
- Update to version 1.16.1
- Explicitly list all required Qt components in USE_QT4 instead of relying
on them being silently picked up through `www/webkit-qt4' dependency
- Group *_build components together while here
- Remove one REINPLACE_CMD call that is no longer needed
|
|
Tue, 24 Feb 2015
|
[ 11:42 danfe ]
379787 biology/ugene/Makefile
379787 biology/ugene/distinfo
379787 biology/ugene/pkg-plist
Update Unipro UGENE to version 1.16.0 (documentation was also rerolled).
|
|
Tue, 6 Jan 2015
|
[ 05:28 danfe ]
376383 biology/ugene/Makefile
376383 biology/ugene/distinfo
376383 biology/ugene/pkg-plist
Update to version 1.15.1.
|
|
Wed, 3 Dec 2014
|
[ 01:40 danfe ]
373799 biology/ugene/Makefile
373799 biology/ugene/distinfo
373799 biology/ugene/pkg-plist
Update to version 1.15.0.
|
|
Mon, 20 Oct 2014
|
[ 07:10 bapt ]
371237 biology/artemis/pkg-plist
371237 biology/biococoa/pkg-plist
371237 biology/crux/pkg-plist
371237 biology/emboss/pkg-plist
371237 biology/fasta3/pkg-plist
371237 biology/fastdnaml/pkg-plist
371237 biology/garlic/pkg-plist
371237 biology/hmmer/pkg-plist
371237 biology/iolib/pkg-plist
371237 biology/jalview/pkg-plist
(Only the first 10 of 36 ports in this commit are shown above. )
Cleanup plist
|
|
Mon, 13 Oct 2014
|
[ 11:01 danfe ]
370764 biology/ugene/Makefile
370764 biology/ugene/distinfo
370764 biology/ugene/pkg-plist
Update to version 1.14.2.
|
|
Mon, 1 Sep 2014
|
[ 07:39 danfe ]
366842 biology/ugene/Makefile
366842 biology/ugene/distinfo
366842 biology/ugene/files
366842 biology/ugene/pkg-plist
- Update Unipro UGENE and documentation to version 1.14.0
- Remove patches integrated upstream (it's nice to have direct contact)
- Sort USES and pkg-plist, cleanup Makefile a bit while here
Approved by: maintainer (implicit)
|
|
Thu, 16 Jan 2014
|
[ 17:17 danfe ]
339938 biology/ugene/Makefile
339938 biology/ugene/distinfo
339938 biology/ugene/files/patch-clang-fixes
339938 biology/ugene/files/patch-gtest-std::tr1::tuple-fix
339938 biology/ugene/files/patch-src-corelibs-U2Core-src-globals-AppResources.cpp
339938 biology/ugene/files/patch-src-shtirlitz-Shtirlitz.cpp
339938 biology/ugene/files/patch-src-ugenem-src-SendReportDialog.cpp
339938 biology/ugene/files/patch-src-ugeneui-src-Main.cpp
339938 biology/ugene/pkg-plist
- Update to version 1.13.0 and improve FreeBSD support; it also builds
pretty cleanly with GCC v4.2, v4.6, and Clang (modulo a few warnings)
- Sadly, do not use PORTDOCS: since DOCSDIR is set to be inside DATADIR,
and will get appended to PLIST after @dirrm %%DATADIR%%, which upsets
sanity checking tools; instead, list the docs explicitly in DISTFILES
and add them to pkg-plist (guarded by %%PORTDOCS%%)
Tested on: i386 (only)
|
|
Fri, 1 Nov 2013
|
[ 15:20 danfe ]
332391 biology/ugene/Makefile
332391 biology/ugene/distinfo
332391 biology/ugene/pkg-plist
- Install official UGENE documentation (PDF)
- Utilize DIST_SUBDIR as now it's more than one distfile
|
|
Thu, 31 Oct 2013
|
[ 15:30 danfe ]
332256 biology/ugene/Makefile
332256 biology/ugene/distinfo
332256 biology/ugene/files/patch-clang-fixes
332256 biology/ugene/files/patch-gtest-std::tr1::tuple-fix
332256 biology/ugene/files/patch-src-corelibs-U2Private-src-CrashHandler.cpp
332256 biology/ugene/files/patch-src-plugins_3rdparty-umuscle-src-muscle-intmath.cpp
332256 biology/ugene/pkg-descr
332256 biology/ugene/pkg-plist
- Update to version 1.12.3
- Conditionalize dependency on `devel/libexecinfo'
- Try to detect SSE2 support
- Convert to USES=qmake and stafigy
- Improve grammar in port description while here
Approved by: maintainer (implicit)
|
|
Tue, 22 Oct 2013
|
[ 13:57 amdmi3 ]
331271 benchmarks/phoronix-test-suite/pkg-plist
331271 biology/gperiodic/Makefile
331271 biology/gperiodic/pkg-plist
331271 biology/ugene/pkg-plist
331271 cad/geda-gattrib/pkg-plist
331271 cad/geda-gschem/pkg-plist
331271 cad/geda/pkg-plist
331271 cad/gerbv/Makefile
331271 cad/gerbv/pkg-plist
331271 cad/gtkwave/pkg-plist
(Only the first 10 of 103 ports in this commit are shown above. )
- Remove manual creation and removal of share/applications, as it's now in the
mtree (categories starting with [bce])
Approved by: portmgr (bdrewery)
|
|
Mon, 25 Feb 2013
|
[ 13:00 danfe ]
312918 biology/ugene/Makefile
312918 biology/ugene/files/patch-src-corelibs-U2Private-src-CrashHandler.cpp
312918 biology/ugene/files/patch-src-plugins_3rdparty-umuscle-src-muscle-intmath.cpp
312918 biology/ugene/pkg-plist
Unbreak on 7.X and i386 systems.
Reported by: QAT
|
|
Sat, 23 Feb 2013
|
[ 04:50 danfe ]
312798 biology/Makefile
312798 biology/ugene
312798 biology/ugene/Makefile
312798 biology/ugene/distinfo
312798 biology/ugene/files
312798 biology/ugene/files/patch-src-corelibs-U2Private-src-CrashHandler.cpp
312798 biology/ugene/pkg-descr
312798 biology/ugene/pkg-plist
Add Unipro UGENE, a free open-source crowss-platform bioinformatics software.
PR: ports/173387
Submitted by: Hannes Hauswedell
|
Number of commits found XX: 18 |
As an Amazon Associate I earn from qualifying purchases.