| non port: biology/unanimity/Makefile |
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SVNWeb
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Number of commits found: 20 |
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Sun, 5 Jan 2020
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[ 10:26 antoine  ]   (Only the first 10 of 35 ports in this commit are shown above.  )
Mark a few ports broken (unfetchable)
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Thu, 26 Dec 2019
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[ 07:54 antoine ] (Only the first 10 of 255 ports in this commit are shown above. )
Deprecate a few ports
With hat: portmgr
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Wed, 11 Dec 2019
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[ 17:53 jbeich ] (Only the first 10 of 417 ports in this commit are shown above. )
devel/boost-*: update to 1.72.0
Changes: http://www.boost.org/users/history/version_1_72_0.html
PR: 241449
Exp-run by: antoine
Differential Revision: https://reviews.freebsd.org/D22136
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Thu, 28 Nov 2019
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[ 05:46 jwb ]
biology/unanimity: Remove erroneous BROKEN
Unsure why this was marked unfetchable. Fetch works fine and the port is
still useful, though it cannot be upgraded to newer releases, which are
closed-source.
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Sun, 24 Nov 2019
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[ 15:53 jwb ]
biology/unanimity and dependencies: Flag as no longer open source
PacBio now provides unanimity only as a binary package through bioconda.
See https://github.com/PacificBiosciences/ccs.
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Wed, 6 Nov 2019
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[ 12:48 antoine ] (Only the first 10 of 268 ports in this commit are shown above. )
Mark a few ports BROKEN, unfetchable
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Mon, 19 Aug 2019
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[ 15:35 jbeich ] (Only the first 10 of 412 ports in this commit are shown above. )
devel/boost-*: update to 1.71.0
Changes: http://www.boost.org/users/history/version_1_71_0.html
PR: 238827
Exp-run by: antoine
Differential Revision: https://reviews.freebsd.org/D20774
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Fri, 26 Jul 2019
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[ 20:46 gerald ] (Only the first 10 of 3853 ports in this commit are shown above. )
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.
PR: 238330
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Fri, 12 Apr 2019
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[ 06:36 jbeich ] (Only the first 10 of 392 ports in this commit are shown above. )
devel/boost-*: update to 1.70.0
Changes: http://www.boost.org/users/history/version_1_70_0.html
PR: 235956
Exp-run by: antoine
Differential Revision: https://reviews.freebsd.org/D19303
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Sun, 24 Feb 2019
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[ 16:04 jwb ]
biology/unanimity: Upgrade to 3.4.1
Minor fixes and enhancements upstream.
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Fri, 22 Feb 2019
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[ 23:26 antoine ]
biology/unanimity is not compatible with python 3.x
PR: 234633
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Wed, 20 Feb 2019
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[ 01:36 jwb ]
biology/unanimity: Upgrade to 3.4.0
Switch from cmake to new meson build system
Tests disabled for now pending work on unbundling googletest
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Tue, 25 Dec 2018
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[ 20:25 tcberner ] (Only the first 10 of 1277 ports in this commit are shown above. )
Change cmake default behaviour to outsource.
Ports that build out of source now simply can use "USES=cmake"
instead of "USES=cmake:outsource". Ports that fail to build
out of source now need to specify "USES=cmake:insource".
I tried to only set insource where explictely needed.
PR: 232038
Exp-run by: antoine
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Wed, 12 Dec 2018
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[ 01:35 gerald ] (Only the first 10 of 3168 ports in this commit are shown above. )
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.
PR: 231590
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[ 00:15 jbeich ] (Only the first 10 of 415 ports in this commit are shown above. )
devel/boost-*: update to 1.69.0
Changes: http://www.boost.org/users/history/version_1_69_0.html
PR: 232525
Exp-run by: antoine
Differential Revision: https://reviews.freebsd.org/D17645
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Tue, 18 Sep 2018
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[ 08:14 linimon ] (Only the first 10 of 22 ports in this commit are shown above. )
More precisely specify USES=compiler to fix build on gcc-based
platforms such as powerpc64.
Tested on powerpc64, amd64.
Approved by: portmgr (tier-2 blanket)
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Sat, 25 Aug 2018
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[ 22:54 jwb ]
biology/unanimity: Upgrade to latest release, soften dep version requirements
Approved by: jrm (mentor)
Differential Revision: https://reviews.freebsd.org/D16902
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Thu, 9 Aug 2018
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[ 06:58 jbeich ] (Only the first 10 of 404 ports in this commit are shown above. )
devel/boost-*: update to 1.68.0
- Switch to C++14 for libboost_system to support C++14 consumers
Changes: http://www.boost.org/users/history/version_1_68_0.html
PR: 229569
Exp-run by: antoine
Differential Revision: https://reviews.freebsd.org/D16165
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Fri, 22 Jun 2018
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[ 00:03 linimon ]
Mark these ports as broken on aarch64.
Approved by: portmgr (tier-2 blanket)
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Tue, 24 Apr 2018
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[ 14:16 jwb ] (Only the first 10 of 13 ports in this commit are shown above. )
biology/unanimity: Pacific Biosciences consensus library and applications
Reviewed by: jrm
Differential Revision: https://reviews.freebsd.org/D15172
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Number of commits found: 20 |
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