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non port: biology/unanimity/Makefile
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Number of commits found: 20

Sun, 5 Jan 2020
[ 10:26 antoine search for other commits by this committer ] Original commit   Revision:522132 (Only the first 10 of 35 ports in this commit are shown above. View all ports for this commit)
Mark a few ports broken (unfetchable)
Thu, 26 Dec 2019
[ 07:54 antoine search for other commits by this committer ] Original commit   Revision:520894 (Only the first 10 of 255 ports in this commit are shown above. View all ports for this commit)
Deprecate a few ports

With hat:	portmgr
Wed, 11 Dec 2019
[ 17:53 jbeich search for other commits by this committer ] Original commit   Revision:519824 (Only the first 10 of 417 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.72.0

Changes:	http://www.boost.org/users/history/version_1_72_0.html
PR:		241449
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D22136
Thu, 28 Nov 2019
[ 05:46 jwb search for other commits by this committer ] Original commit   Revision:518557
biology/unanimity: Remove erroneous BROKEN

Unsure why this was marked unfetchable.  Fetch works fine and the port is
still useful, though it cannot be upgraded to newer releases, which are
closed-source.
Sun, 24 Nov 2019
[ 15:53 jwb search for other commits by this committer ] Original commit   Revision:518334
biology/unanimity and dependencies: Flag as no longer open source

PacBio now provides unanimity only as a binary package through bioconda.
See https://github.com/PacificBiosciences/ccs.
Wed, 6 Nov 2019
[ 12:48 antoine search for other commits by this committer ] Original commit   Revision:516880 (Only the first 10 of 268 ports in this commit are shown above. View all ports for this commit)
Mark a few ports BROKEN, unfetchable
Mon, 19 Aug 2019
[ 15:35 jbeich search for other commits by this committer ] Original commit   Revision:509290 (Only the first 10 of 412 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.71.0

Changes:	http://www.boost.org/users/history/version_1_71_0.html
PR:		238827
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D20774
Fri, 26 Jul 2019
[ 20:46 gerald search for other commits by this committer ] Original commit   Revision:507372 (Only the first 10 of 3853 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
Fri, 12 Apr 2019
[ 06:36 jbeich search for other commits by this committer ] Original commit   Revision:498698 (Only the first 10 of 392 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.70.0

Changes:	http://www.boost.org/users/history/version_1_70_0.html
PR:		235956
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D19303
Sun, 24 Feb 2019
[ 16:04 jwb search for other commits by this committer ] Original commit   Revision:493769
biology/unanimity: Upgrade to 3.4.1

Minor fixes and enhancements upstream.
Fri, 22 Feb 2019
[ 23:26 antoine search for other commits by this committer ] Original commit   Revision:493621
biology/unanimity is not compatible with python 3.x

PR:		234633
Wed, 20 Feb 2019
[ 01:36 jwb search for other commits by this committer ] Original commit   Revision:493402
biology/unanimity: Upgrade to 3.4.0

Switch from cmake to new meson build system
Tests disabled for now pending work on unbundling googletest
Tue, 25 Dec 2018
[ 20:25 tcberner search for other commits by this committer ] Original commit   Revision:488341 (Only the first 10 of 1277 ports in this commit are shown above. View all ports for this commit)
Change cmake default behaviour to outsource.

Ports that build out of source now simply can use "USES=cmake"
instead of "USES=cmake:outsource". Ports that fail to build
out of source now need to specify "USES=cmake:insource".

I tried to only set insource where explictely needed.

PR:		232038
Exp-run by:	antoine
Wed, 12 Dec 2018
[ 01:35 gerald search for other commits by this committer ] Original commit   Revision:487272 (Only the first 10 of 3168 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
[ 00:15 jbeich search for other commits by this committer ] Original commit   Revision:487266 (Only the first 10 of 415 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.69.0

Changes:	http://www.boost.org/users/history/version_1_69_0.html
PR:		232525
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D17645
Tue, 18 Sep 2018
[ 08:14 linimon search for other commits by this committer ] Original commit   Revision:479990 (Only the first 10 of 22 ports in this commit are shown above. View all ports for this commit)
More precisely specify USES=compiler to fix build on gcc-based
platforms such as powerpc64.

Tested on powerpc64, amd64.

Approved by:	portmgr (tier-2 blanket)
Sat, 25 Aug 2018
[ 22:54 jwb search for other commits by this committer ] Original commit   Revision:478089
biology/unanimity: Upgrade to latest release, soften dep version requirements

Approved by:    jrm (mentor)
Differential Revision:  https://reviews.freebsd.org/D16902
Thu, 9 Aug 2018
[ 06:58 jbeich search for other commits by this committer ] Original commit   Revision:476723 (Only the first 10 of 404 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.68.0

- Switch to C++14 for libboost_system to support C++14 consumers

Changes:	http://www.boost.org/users/history/version_1_68_0.html
PR:		229569
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D16165
Fri, 22 Jun 2018
[ 00:03 linimon search for other commits by this committer ] Original commit   Revision:473010
Mark these ports as broken on aarch64.

Approved by:	portmgr (tier-2 blanket)
Tue, 24 Apr 2018
[ 14:16 jwb search for other commits by this committer ] Original commit   Revision:468214 (Only the first 10 of 13 ports in this commit are shown above. View all ports for this commit)
biology/unanimity: Pacific Biosciences consensus library and applications

Reviewed by:    jrm
Differential Revision:  https://reviews.freebsd.org/D15172

Number of commits found: 20