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non port: biology/vcftools/Makefile
SVNWeb

Number of commits found: 6

Sat, 4 Aug 2018
[ 01:29 jwb ] Original commit   Revision:476330
476330 biology/vcftools/Makefile
476330 biology/vcftools/distinfo
biology/vcftools: Update to 0.1.16, a security release

Approved by:    jrm (mentor)
Differential Revision:  https://reviews.freebsd.org/D16587
Wed, 31 Jan 2018
[ 01:07 jwb ] Original commit   Revision:460452
460452 audio/praat/Makefile
460452 biology/bowtie/Makefile
460452 biology/bwa/Makefile
460452 biology/cd-hit/Makefile
460452 biology/cdbfasta/Makefile
460452 biology/fastool/Makefile
460452 biology/fastx-toolkit/Makefile
460452 biology/gmap/Makefile
460452 biology/jellyfish/Makefile
460452 biology/libgtextutils/Makefile

(Only the first 10 of 56 ports in this commit are shown above. View all ports for this commit)
Multiple ports:
Change maintainer email bacon4000@gmail.com to jwb@FreeBSD.org
Remove Created by comments for same user

Approved by: jrm (mentor)
Differential Revision:  https://reviews.freebsd.org/D14128
Mon, 27 Nov 2017
[ 23:05 jwb ] Original commit   Revision:455000
455000 biology/vcftools/Makefile
455000 biology/vcftools/distinfo
biology/vcftools: Upgrade to latest release 0.1.15

Approved by:    jrm (mentor)
Differential Revision:  https://reviews.freebsd.org/D13276
Tue, 3 Jan 2017
[ 17:06 jbeich ] Original commit   Revision:430483
430483 audio/forked-daapd/Makefile
430483 audio/sayonara/Makefile
430483 biology/vcftools/Makefile
430483 databases/monetdb/files/patch-configure
430483 devel/bennugd-core/Makefile
430483 devel/bennugd-modules/Makefile
430483 devel/liborcus/Makefile
430483 devel/liborcus07/Makefile
430483 devel/love/Makefile
430483 emulators/mupen64plus-core/files/patch-source_mupen64plus-core_projects_unix_Makefile

(Only the first 10 of 27 ports in this commit are shown above. View all ports for this commit)
Assume "pkg-config zlib" works after 9.x reached EOL

Many ports passed ZLIB_CFLAGS="-I/usr/include" ZLIB_LIBS="-L/usr/lib -lz"
which is unsafe at least with lang/gcc* that override some system headers
and have newer libgcc_s.so that our old version in base may not be
forward-compatible with.
Sat, 26 Nov 2016
[ 10:09 mat ] Original commit   Revision:427136
427136 biology/vcftools/Makefile
427136 biology/vcftools/distinfo
427136 deskutils/taskwarrior/Makefile
427136 deskutils/taskwarrior/distinfo
427136 devel/oniguruma5/Makefile
427136 devel/oniguruma5/distinfo
427136 devel/py-dateutil/Makefile
427136 devel/py-dateutil/distinfo
427136 dns/void-zones-tools/Makefile
427136 dns/void-zones-tools/distinfo

(Only the first 10 of 20 ports in this commit are shown above. View all ports for this commit)
Fixup USE_GITHUB usage.

It already sets DISTNAME to a very nice unique name, do not set it
yourself.

Sponsored by:	Absolight
Fri, 26 Feb 2016
[ 17:07 rakuco ] Original commit   Revision:409624
409624 biology/Makefile
409624 biology/vcftools
409624 biology/vcftools/Makefile
409624 biology/vcftools/distinfo
409624 biology/vcftools/pkg-descr
409624 biology/vcftools/pkg-plist
New port: biology/vcftools.

A set of tools written in Perl and C++ for working with VCF files, such as
those generated by the 1000 Genomes Project.

WWW: https://github.com/vcftools/vcftools

PR:		206926
Submitted by:	Jason Bacon <bacon4000@gmail.com>

Number of commits found: 6

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