R-cran-SQUAREM Squared Extrapolation Methods for Accelerating EM-Like Algorithms

2017.10.1_2 math =0 2017.10.1Version of this port present on the latest quarterly branch.

Maintainer: tota@FreeBSD.org

Port Added: 2018-04-11 08:49:05

Last Update: 2019-07-26 21:46:57

SVN Revision: 507372

License: GPLv2+

Description:

Algorithms for accelerating the convergence of slow, monotone sequences from smooth, contraction mapping such as the EM algorithm. It can be used to accelerate any smooth, linearly convergent acceleration scheme. A tutorial style introduction to this package is available in a vignette on the CRAN download page or, when the package is loaded in an R session, with vignette("SQUAREM"). WWW: https://cran.r-project.org/web/packages/SQUAREM/

SVNWeb : Homepage

pkg-plist: as obtained via: make generate-plist

Expand this list (3 items)

1. /usr/local/share/licenses/R-cran-SQUAREM-2017.10.1_2/catalog.mk
2. /usr/local/share/licenses/R-cran-SQUAREM-2017.10.1_2/LICENSE
3. /usr/local/share/licenses/R-cran-SQUAREM-2017.10.1_2/GPLv2+

Collapse this list.

Dependency lines:

• R-cran-SQUAREM>0:math/R-cran-SQUAREM

To install the port: cd /usr/ports/math/R-cran-SQUAREM/ && make install clean

To add the package: pkg install R-cran-SQUAREM

PKGNAME: R-cran-SQUAREM

Flavors: there is no flavor information for this port.

distinfo:

TIMESTAMP = 1523434320 SHA256 (SQUAREM_2017.10-1.tar.gz) = 9b89905b436f1cf3faa9e3dabc585a76299e729e85ca659bfddb4b7cba11b283 SIZE (SQUAREM_2017.10-1.tar.gz) = 245734

Dependencies

NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.

Build dependencies:

1. R : math/R

Runtime dependencies:

1. R : math/R

This port is required by:

for Build

1. math/R-cran-lava

for Run

1. math/R-cran-lava

Configuration Options

No options to configure

USES:

cran:auto-plist

Master Sites:

1. http://camoruco.ing.uc.edu.ve/cran/src/contrib/
2. http://camoruco.ing.uc.edu.ve/cran/src/contrib/Archive/SQUAREM/
3. http://cran.utstat.utoronto.ca/src/contrib/
4. http://cran.utstat.utoronto.ca/src/contrib/Archive/SQUAREM/
5. https://cloud.r-project.org/src/contrib/
6. https://cloud.r-project.org/src/contrib/Archive/SQUAREM/
7. https://cran.cnr.berkeley.edu/src/contrib/
8. https://cran.cnr.berkeley.edu/src/contrib/Archive/SQUAREM/
9. https://cran.csiro.au/src/contrib/
10. https://cran.csiro.au/src/contrib/Archive/SQUAREM/
11. https://cran.gis-lab.info/src/contrib/
12. https://cran.gis-lab.info/src/contrib/Archive/SQUAREM/
13. https://cran.ism.ac.jp/src/contrib/
14. https://cran.ism.ac.jp/src/contrib/Archive/SQUAREM/
15. https://cran.ma.imperial.ac.uk/src/contrib/
16. https://cran.ma.imperial.ac.uk/src/contrib/Archive/SQUAREM/
17. https://mirror.las.iastate.edu/CRAN/src/contrib/
18. https://mirror.las.iastate.edu/CRAN/src/contrib/Archive/SQUAREM/
19. https://mirrors.tuna.tsinghua.edu.cn/CRAN/src/contrib/
20. https://mirrors.tuna.tsinghua.edu.cn/CRAN/src/contrib/Archive/SQUAREM/
21. https://stat.ethz.ch/CRAN/src/contrib/
22. https://stat.ethz.ch/CRAN/src/contrib/Archive/SQUAREM/

Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330

Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590

- Add new port: math/R-cran-SQUAREM

  Algorithms for accelerating the convergence of slow, monotone
  sequences from smooth, contraction mapping such as the EM algorithm.
  It can be used to accelerate any smooth, linearly convergent
  acceleration scheme. A tutorial style introduction to this package
  is available in a vignette on the CRAN download page or, when the
  package is loaded in an R session, with vignette("SQUAREM").

  WWW: https://cran.r-project.org/web/packages/SQUAREM/

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Last updated:
2019-12-06 20:23:44