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Why was the website so slow for so long?

The cause of the slowdown was a change to the ZFS dataset. In conjunction with the database server, very little caching was being done. This combination resulted in increased disk I/O as the system churned through the database. Details in the blog post which outlines the various things which changed. Many graphs.

Sanity Test Failure
Tue, 25 May 2010
[ 20:17 pgollucci ] Original commit 
mod_accounting 0.5_6 www  Deleted Deprecated Expired files touched by this commit An Apache module that records traffic statistics into a database
mod_auth_form 2.05 www  Deleted Broken Deprecated Expired Ignore files touched by this commit MySQL based form authentication module for Apache 2.x
mod_auth_kerb 5.3 www  Deleted Deprecated Expired files touched by this commit An Apache module for authenticating users with Kerberos v5
mod_auth_kerb2 5.4 www files touched by this commit Apache module for authenticating users with Kerberos v5
mod_auth_mysql 3.2 www  Deleted Deprecated Expired files touched by this commit Allows users to use MySQL databases for user authentication
mod_auth_openid 0.4 www files touched by this commit Authentication module for the Apache 2 webserver with OpenID
mod_auth_pam2 1.1.1_2 www files touched by this commit Allows users to use PAM modules for user authentication
mod_auth_pgsql 0.9.12_4 www  Deleted Deprecated Expired files touched by this commit Allows users to use PostgreSQL databases for user authentication
mod_auth_pubtkt 0.5 www files touched by this commit Apache module to provide public key ticket based authentication
mod_auth_xradius 0.4.6 www files touched by this commit Enables RADIUS authentication

(Only the first 10 of 58 ports in this commit are shown above. View all ports for this commit)
Mk/bsd.apache.mk can not sufficiently alter things before Mk/bsd.options.mk
in Mk/bsd.ports.mk due to ordering in Mk/bsd.port.mk.  This causes OPTIONSFILE
to be incorrectly set during some make phases as a result of the recent
PKGNAMEPREFIX for apache ports.

'Revert' some of the PKGNAMEPREFIX changes for apXX-.
   - Must be manually requested in tbe port Makefile either by
     a) AP_FAST_BUILD=yes
     b) PKGNAMEPREFIX=${APACHE_PKGNAMEPREFIX}
   - Going forward, we will only do this for ports where WITH_APACHE
       is NOT optional, but required.  mod_* ports are a good fit.

141 ports are mod_ ports
  80 of those use AP_FAST_BUILD and thus are auto hooked by this patch [a].
  61 remaining are then patched to mirror the other $lang frameworks [b].

PR:             ports/146956
Reported by:    Hans F. Nordhaug <Hans.F.Nordhaug@hiMolde.no>, several
Discussed with: pav, itectu on #bsdports
Tested by:      P6 TB run
Approved by:    portmgr (pav)

Sanity Test Results

www/mod_wsgi3:

This command (FreshPorts code 1):

make -V PORTNAME -V PKGNAME -V DESCR -V CATEGORIES -V PORTVERSION -V
PORTREVISION  -V COMMENT -V COMMENTFILE -V MAINTAINER -V EXTRACT_SUFX  -V
BUILD_DEPENDS -V RUN_DEPENDS -V LIB_DEPENDS -V FORBIDDEN -V BROKEN -V
DEPRECATED -V IGNORE  -V MASTER_PORT -V LATEST_LINK -V NO_LATEST_LINK -V
NO_PACKAGE -V PKGNAMEPREFIX -V PKGNAMESUFFIX -V PORTEPOCH  -V RESTRICTED -V
NO_CDROM -V EXPIRATION_DATE -V IS_INTERACTIVE  -V ONLY_FOR_ARCHS -V
NOT_FOR_ARCHS -f /usr/home/dan/ports/www/mod_wsgi3/Makefile 
DISTDIR=/usr/ports/distfiles  PORTSDIR=/usr/home/dan/ports
LOCALBASE=/nonexistentlocal
2>/tmp/FreshPorts.www.mod_wsgi3.make-error.2010.5.25.21.20.41.68452

produced this error:

Error message is: "/usr/home/dan/ports/www/mod_wsgi3/Makefile", line 14:
Unassociated shell command "http://apt.douglasthrift.net/files/${PORTNAME}/
 http://code.douglasthrift.net/files/${PORTNAME}/"
make: fatal errors encountered -- cannot continue

www/mod_wsgi:

This command (FreshPorts code 1):

make -V PORTNAME -V PKGNAME -V DESCR -V CATEGORIES -V PORTVERSION -V
PORTREVISION  -V COMMENT -V COMMENTFILE -V MAINTAINER -V EXTRACT_SUFX  -V
BUILD_DEPENDS -V RUN_DEPENDS -V LIB_DEPENDS -V FORBIDDEN -V BROKEN -V
DEPRECATED -V IGNORE  -V MASTER_PORT -V LATEST_LINK -V NO_LATEST_LINK -V
NO_PACKAGE -V PKGNAMEPREFIX -V PKGNAMESUFFIX -V PORTEPOCH  -V RESTRICTED -V
NO_CDROM -V EXPIRATION_DATE -V IS_INTERACTIVE  -V ONLY_FOR_ARCHS -V
NOT_FOR_ARCHS -f /usr/home/dan/ports/www/mod_wsgi/Makefile 
DISTDIR=/usr/ports/distfiles  PORTSDIR=/usr/home/dan/ports
LOCALBASE=/nonexistentlocal
2>/tmp/FreshPorts.www.mod_wsgi.make-error.2010.5.25.21.20.43.68452

produced this error:

Error message is: "/usr/home/dan/ports/www/mod_wsgi/Makefile", line 14:
Unassociated shell command "http://apt.douglasthrift.net/files/${PORTNAME}/
 http://code.douglasthrift.net/files/${PORTNAME}/"
make: fatal errors encountered -- cannot continue

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