Port details on branch 2022Q3 |
- coot Crystallographic Object-Oriented Toolkit
- 0.8.9.2_3 science
=0 0.8.9.2_3Version of this port present on the latest quarterly branch.
- BROKEN: unfetchable
DEPRECATED: Broken, uses EOLed python27 This port expired on: 2020-02-19 IGNORE: is marked as broken: unfetchable
- Maintainer: yuri@FreeBSD.org
- Port Added: 2018-07-08 04:45:42
- Last Update: 2020-02-22 19:08:36
- SVN Revision: 526852
- License: LGPL3
- WWW:
- https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/
- Description:
- Coot is for macromolecular model building, model completion and validation,
particularly suitable for protein modelling using X-ray data.
Coot displays maps and models and allows model manipulations such as
idealization, real space refinement, manual rotation/translation, rigid-body
fitting, ligand search, solvation, mutations, rotamers, Ramachandran plots,
skeletonization, non-crystallographic symmetry and more.
WWW: https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/
-
cgit ¦ GitHub ¦ GitHub ¦ GitLab ¦
- Manual pages:
-
- pkg-plist: as obtained via:
make generate-plist - Dependency lines:
-
- No installation instructions:
- This port has been deleted.
- PKGNAME: coot
- Flavors: there is no flavor information for this port.
- distinfo:
- TIMESTAMP = 1554259683
SHA256 (coot/coot-0.8.9.2.tar.gz) = f24ed258e43ea31452b54c62649c071aa15f356d077dce0dab94eb04f27a6625
SIZE (coot/coot-0.8.9.2.tar.gz) = 19635513
No package information for this port in our database- Sometimes this happens. Not all ports have packages.
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- fftw>0 : math/fftw
- update-desktop-database : devel/desktop-file-utils
- gfortran9 : lang/gcc9
- gmake : devel/gmake
- gtk-update-icon-cache : graphics/gtk-update-icon-cache
- pkgconf>=1.3.0_1 : devel/pkgconf
- python2.7 : lang/python27
- as : devel/binutils
- xorgproto>=0 : x11/xorgproto
- xorgproto>=0 : x11/xorgproto
- ice.pc : x11/libICE
- sm.pc : x11/libSM
- x11.pc : x11/libX11
- xmu.pc : x11-toolkits/libXmu
- xt.pc : x11-toolkits/libXt
- Runtime dependencies:
-
- bash : shells/bash
- update-desktop-database : devel/desktop-file-utils
- gfortran9 : lang/gcc9
- gtk-update-icon-cache : graphics/gtk-update-icon-cache
- python2.7 : lang/python27
- ice.pc : x11/libICE
- sm.pc : x11/libSM
- x11.pc : x11/libX11
- xmu.pc : x11-toolkits/libXmu
- xt.pc : x11-toolkits/libXt
- Library dependencies:
-
- libccp4c.so : science/libccp4
- libclipper-core.so : science/clipper
- libcurl.so : ftp/curl
- libfontconfig.so : x11-fonts/fontconfig
- libfreetype.so : print/freetype2
- libgoocanvas.so : graphics/goocanvas
- libgtkglext-x11-1.0.so : x11-toolkits/gtkglext
- libgsl.so : math/gsl
- libmmdb2.so : science/mmdb2
- libpng.so : graphics/png
- libsfftw.so : math/fftw-float
- libssm.so : science/libssm
- libintl.so : devel/gettext-runtime
- libGL.so : graphics/mesa-libs
- libGLU.so : graphics/libGLU
- libglut.so : graphics/freeglut
- libatk-1.0.so : accessibility/atk
- libcairo.so : graphics/cairo
- libgdk_pixbuf-2.0.so : graphics/gdk-pixbuf2
- libglib-2.0.so : devel/glib20
- libintl.so : devel/gettext-runtime
- libgtk-x11-2.0.so : x11-toolkits/gtk20
- libart_lgpl_2.so : graphics/libart_lgpl
- libglade-2.0.so : devel/libglade2
- libgnomecanvas-2.so : graphics/libgnomecanvas
- libxml2.so : textproc/libxml2
- libpango-1.0.so : x11-toolkits/pango
- libpangox-1.0.so : x11-toolkits/pangox-compat
- libsqlite3.so : databases/sqlite3
- There are no ports dependent upon this port
Configuration Options:
- No options to configure
- Options name:
- N/A
- USES:
- compiler:c++11-lang desktop-file-utils fortran gettext-runtime gl gmake gnome libtool localbase:ldflags pkgconfig python:2.7 shebangfix sqlite xorg xorg
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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