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non port: science/erkale/Makefile

Number of commits found: 55

Monday, 24 Jul 2023
20:40 Yuri Victorovich (yuri) search for other commits by this committer
science/erkale: Fix build with clang16 by adding USE_CXXSTD.

Reported by:	fallout
commit hash: 610b94d2883e2324bc49d428f5b1b05f9eb67688 commit hash: 610b94d2883e2324bc49d428f5b1b05f9eb67688 commit hash: 610b94d2883e2324bc49d428f5b1b05f9eb67688 commit hash: 610b94d2883e2324bc49d428f5b1b05f9eb67688 610b94d2
Sunday, 23 Apr 2023
09:09 Gerald Pfeifer (gerald) search for other commits by this committer
*: Bump PORTREVISIONs for math/mpc update to 1.3.1
commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b 8d3e020
Saturday, 5 Nov 2022
14:47 Thierry Thomas (thierry) search for other commits by this committer
science/*: bump PORTREVISION in consumers of libXC
commit hash: cceff449fd65e82dae764ff16b72000d1cd0454b commit hash: cceff449fd65e82dae764ff16b72000d1cd0454b commit hash: cceff449fd65e82dae764ff16b72000d1cd0454b commit hash: cceff449fd65e82dae764ff16b72000d1cd0454b cceff44
Wednesday, 26 Oct 2022
17:58 Thierry Thomas (thierry) search for other commits by this committer
science/erkale: chase libXC 6.0.0

Patch from
<https://github.com/susilehtola/erkale/commit/d507f5c0aa10614f00b1fa77ddb944490a5a7706>.

PR:		267358
Approved by:	yuri (maintainer)
commit hash: fb5d8423ae1d43ff5012df1e37ba8b8c843a69fe commit hash: fb5d8423ae1d43ff5012df1e37ba8b8c843a69fe commit hash: fb5d8423ae1d43ff5012df1e37ba8b8c843a69fe commit hash: fb5d8423ae1d43ff5012df1e37ba8b8c843a69fe fb5d842
Wednesday, 7 Sep 2022
21:10 Stefan E├čer (se) search for other commits by this committer
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.

This commit implements such a proposal and moves one of the WWW: entries
of each pkg-descr file into the respective port's Makefile. A heuristic
attempts to identify the most relevant URL in case there is more than
one WWW: entry in some pkg-descr file. URLs that are not moved into the
Makefile are prefixed with "See also:" instead of "WWW:" in the pkg-descr
files in order to preserve them.

There are 1256 ports that had no WWW: entries in pkg-descr files. These
ports will not be touched in this commit.

The portlint port has been adjusted to expect a WWW entry in each port
Makefile, and to flag any remaining "WWW:" lines in pkg-descr files as
deprecated.

Approved by:		portmgr (tcberner)
commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 b7f0544
Friday, 12 Aug 2022
14:46 Dima Panov (fluffy) search for other commits by this committer
*/*: bump all consumers after recent boost upgrade
commit hash: 4cf39decb348615b9c8a28370d987a85d1b8a5ed commit hash: 4cf39decb348615b9c8a28370d987a85d1b8a5ed commit hash: 4cf39decb348615b9c8a28370d987a85d1b8a5ed commit hash: 4cf39decb348615b9c8a28370d987a85d1b8a5ed 4cf39de
Wednesday, 20 Jul 2022
14:35 Tobias C. Berner (tcberner) search for other commits by this committer
science/hdf5: bump PORTREVISION of consumers

The SO-version increased in the update to 1.12.2 in
a43418b81530f7e897abfbe18dd59f44265a1a0f .

Reported by:	VVD <vvd@unislabs.com>
commit hash: 5564b3b420db29745d2d4981d1963200ddf53e35 commit hash: 5564b3b420db29745d2d4981d1963200ddf53e35 commit hash: 5564b3b420db29745d2d4981d1963200ddf53e35 commit hash: 5564b3b420db29745d2d4981d1963200ddf53e35 5564b3b
Thursday, 16 Jun 2022
15:13 Po-Chuan Hsieh (sunpoet) search for other commits by this committer
*/*: Replace science/szip with science/libaec

- Bump PORTREVISION of dependent ports for dependency change

szip does not allow redistribution in binary form without proper commercial
license. Its LICENSE_PERMS should be set to no-auto-accept which blocks building
this port, therefore building dependent ports are also blocked. Switch all
dependent ports to science/libaec to avoid conflicts and license issue.

PR:		228743, 246097, 250165
commit hash: 328ae4074233a5b85e0e38efece1af5dcc218160 commit hash: 328ae4074233a5b85e0e38efece1af5dcc218160 commit hash: 328ae4074233a5b85e0e38efece1af5dcc218160 commit hash: 328ae4074233a5b85e0e38efece1af5dcc218160 328ae40
Tuesday, 24 May 2022
19:51 Yuri Victorovich (yuri) search for other commits by this committer
science/erkale{,-pseudopotentials}: Update g20200426 -> g20220405
commit hash: 0a8721e87c37fdc733abcf018a1312a5669d577b commit hash: 0a8721e87c37fdc733abcf018a1312a5669d577b commit hash: 0a8721e87c37fdc733abcf018a1312a5669d577b commit hash: 0a8721e87c37fdc733abcf018a1312a5669d577b 0a8721e
Wednesday, 12 Jan 2022
19:41 Tobias C. Berner (tcberner) search for other commits by this committer
math/gsl: bump portrevision of consumers after update to 2.7.1

PR:		260201
commit hash: 654acd81409d31495f8b1b11db61e1afbf640981 commit hash: 654acd81409d31495f8b1b11db61e1afbf640981 commit hash: 654acd81409d31495f8b1b11db61e1afbf640981 commit hash: 654acd81409d31495f8b1b11db61e1afbf640981 654acd8
Tuesday, 21 Sep 2021
09:25 Danilo Egea Gondolfo (danilo) search for other commits by this committer
math/armadillo: Update to 10.6.2

Drop maintainership.
commit hash: 170cb07fe4e8369798af028f34d71535c45f2bb0 commit hash: 170cb07fe4e8369798af028f34d71535c45f2bb0 commit hash: 170cb07fe4e8369798af028f34d71535c45f2bb0 commit hash: 170cb07fe4e8369798af028f34d71535c45f2bb0 170cb07
Wednesday, 16 Jun 2021
19:31 Tobias C. Berner (tcberner) search for other commits by this committer
math/gsl: update to 2.7

From [1]

* What is new in gsl-2.7:
	* fixed doc bug for gsl_histogram_min_bin (lhcsky at 163.com)
	* fixed bug #60335 (spmatrix test failure, J. Lamb)
	* fixed bug #36577
	* clarified documentation on interpolation accelerators (V. Krishnan)
	* fixed bug #45521 (erroneous GSL_ERROR_NULL in ode-initval2, thanks to M.
Sitte)
	* fixed doc bug #59758
	* fixed bug #58202 (rstat median for n=5)
	* added support for native C complex number types in gsl_complex
	   when using a C11 compiler
	* upgraded to autoconf 2.71, automake 1.16.3, libtool 2.4.6
	* updated exponential fitting example for nonlinear least squares
	* added banded LU decomposition and solver (gsl_linalg_LU_band)
	* New functions added to the library:
	      - gsl_matrix_norm1
	      - gsl_spmatrix_norm1
	      - gsl_matrix_complex_conjtrans_memcpy
	      - gsl_linalg_QL: decomp, unpack
	      - gsl_linalg_complex_QR_* (thanks to Christian Krueger)
	      - gsl_vector_sum
	      - gsl_matrix_scale_rows
	      - gsl_matrix_scale_columns
	      - gsl_multilarge_linear_matrix_ptr
	      - gsl_multilarge_linear_rhs_ptr
	      - gsl_spmatrix_dense_add (renamed from gsl_spmatrix_add_to_dense)
	      - gsl_spmatrix_dense_sub
	      - gsl_linalg_cholesky_band: solvem, svxm, scale, scale_apply
	      - gsl_linalg_QR_UD: decomp, lssolve
	      - gsl_linalg_QR_UU: decomp, lssolve, QTvec
	      - gsl_linalg_QR_UZ: decomp
	      - gsl_multifit_linear_lcurvature
	      - gsl_spline2d_eval_extrap
	* bug fix in checking vector lengths in gsl_vector_memcpy (dieggsy@pm.me)
	* made gsl_sf_legendre_array_index() inline and documented
	      - gsl_sf_legendre_nlm()

[1] http://git.savannah.gnu.org/cgit/gsl.git/tree/NEWS

PR:		256423
Exp-run by:	antoine
commit hash: 63e653adaa7493aa98f17f9fbc834c0aed7e096e commit hash: 63e653adaa7493aa98f17f9fbc834c0aed7e096e commit hash: 63e653adaa7493aa98f17f9fbc834c0aed7e096e commit hash: 63e653adaa7493aa98f17f9fbc834c0aed7e096e 63e653a
Friday, 9 Apr 2021
01:39 Yuri Victorovich (yuri) search for other commits by this committer
science/erkale: Update g20200426 -> g20210215
commit hash: fff94b28f5d4772ba84805a377263a7b4f887730 commit hash: fff94b28f5d4772ba84805a377263a7b4f887730 commit hash: fff94b28f5d4772ba84805a377263a7b4f887730 commit hash: fff94b28f5d4772ba84805a377263a7b4f887730 fff94b2
Wednesday, 7 Apr 2021
08:09 Mathieu Arnold (mat) search for other commits by this committer
One more small cleanup, forgotten yesterday.
Reported by:	lwhsu
commit hash: cf118ccf875508b9a1c570044c93cfcc82bd455c commit hash: cf118ccf875508b9a1c570044c93cfcc82bd455c commit hash: cf118ccf875508b9a1c570044c93cfcc82bd455c commit hash: cf118ccf875508b9a1c570044c93cfcc82bd455c cf118cc
Tuesday, 6 Apr 2021
14:31 Mathieu Arnold (mat) search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
commit hash: 305f148f482daf30dcf728039d03d019f88344eb commit hash: 305f148f482daf30dcf728039d03d019f88344eb commit hash: 305f148f482daf30dcf728039d03d019f88344eb commit hash: 305f148f482daf30dcf728039d03d019f88344eb 305f148
Thursday, 29 Oct 2020
22:30 danilo search for other commits by this committer
math/armadillo: Update to 10.1.1
Original commitRevision:553653 
Monday, 10 Aug 2020
13:12 danilo search for other commits by this committer
- Update math/armadillo to 9.900.2
Original commitRevision:544615 
Wednesday, 6 May 2020
21:19 danilo search for other commits by this committer
- Update math/armadillo to 9.870.2
Original commitRevision:534203 
16:43 yuri search for other commits by this committer
science/erkale: Change the default flavor to 'parallel'; Remove the redundant
OPENBLAS_LIB_DEPENDS line

parallel is what should be a default for production use.

Approved by:	portmgr (flavors were approved by portmgr when the port was
committed)
Original commitRevision:534192 
16:39 yuri search for other commits by this committer
Bump 37 ports depending on math/openblas through USES=blaslapack:openblas
because after the recent math/openblas update the library name changed in
openblas
Original commitRevision:534190 
16:11 yuri search for other commits by this committer
Bump 46 ports depending on math/openblas because the after the recent
math/openblas update the library name changed in openblas.
Original commitRevision:534185 
Friday, 1 May 2020
06:12 yuri search for other commits by this committer
science/erkale: Update g20200416 -> g20200426
Original commitRevision:533512 
Friday, 17 Apr 2020
19:00 yuri search for other commits by this committer
science/erkale: Update g20200319 -> g20200416
Original commitRevision:531959 
Thursday, 16 Apr 2020
14:48 pkubaj search for other commits by this committer
science/erkale: fix build on GCC architectures

Use newer GCC:
/usr/local/include/armadillo_bits/compiler_setup.hpp:190:6: error: #error "***
newer compiler required ***"
Original commitRevision:531849 
Saturday, 11 Apr 2020
18:24 yuri search for other commits by this committer
science/erkale: Update g20200110 -> g20200319
Original commitRevision:531449 
Sunday, 8 Mar 2020
21:56 jbeich search for other commits by this committer
Drop dependency on devel/openmp

- Drop if devel/llvm* was used as a substitute

Approved by:	yuri, rene (earlier version)
Differential Revision:	https://reviews.freebsd.org/D23020
Original commitRevision:528082 
Thursday, 30 Jan 2020
14:17 swills search for other commits by this committer
Fix math/openblas and bump dependent ports

* Fix build on i386 [1]
* Fix science/code_saturne build with new openblas [2]
* Avoid installing private headers [3]
* Prevent build from optimizing for host by correcting build confg [4]
* Bump portrevision of dependent ports [5]

This is correcting issues from r523749 [1][2][4] and r515970 [3]

PR:		231371
Reported by:	build cluster [1]
Reported by:	Dima Pasechnik <dimpase+freebsd@gmail.com> [2]
Reported by:	many [5]
Reviewed by:	mat, bapt
Approved by:	implicit, since this is a build fix
Original commitRevision:524642 
Tuesday, 21 Jan 2020
22:03 swills search for other commits by this committer
math/openblas: Update to 0.3.7

While here, improve formatting and fix build of dependant ports.

PR:		231371
Submitted by:	yuri (initial version), pkubaj (ppc fixes)
Approved by:	Eijiro Shibusawa <phd_kimberlite@yahoo.co.jp> (maintainer)
Original commitRevision:523749 
Friday, 17 Jan 2020
04:29 yuri search for other commits by this committer
science/erkale: Update g20191120 -> g20200110
Original commitRevision:523270 
Saturday, 23 Nov 2019
16:27 yuri search for other commits by this committer
science/erkale: Update g20190812 -> g20191120
Original commitRevision:518254 
Friday, 8 Nov 2019
03:28 linimon search for other commits by this committer
Unmark broken on aarch64.

Submitted by:	emaste (TRYBROKEN run)
Approved by:	portmgr (tier-2 blanket)
Original commitRevision:517025 
Friday, 25 Oct 2019
23:41 tcberner search for other commits by this committer
math/gsl: update to 2.6

- math/p5-Math-GSL does not seem to have any upstream activity to make it work
with this version -> mark it broken
  - this also breaks the two consumers of this port

- biology/gemma: has a conflict with cblas, and is makred broken.

PR:		241363
Exp-run by:	antoine
Original commitRevision:515671 
Sunday, 13 Oct 2019
08:59 antoine search for other commits by this committer
Fix LIB_DEPENDS
Original commitRevision:514376 
Saturday, 21 Sep 2019
18:59 jbeich search for other commits by this committer
devel/openmp: update to 9.0.0

- Connect tests to the framework to help QA remaining patches
- Force rebuild all consumers after https://reviews.llvm.org/D59783

Changes:	http://llvm.org/viewvc/llvm-project/openmp/tags/RELEASE_900/final/?view=log
ABI:		https://abi-laboratory.pro/tracker/timeline/llvm_openmp/
Original commitRevision:512535 
Friday, 20 Sep 2019
19:58 jbeich search for other commits by this committer
Switch default devel/llvm* to 90

PR:		239682
Reviewed by:	tobik
Differential Revision:	https://reviews.freebsd.org/D21172
Original commitRevision:512440 
Saturday, 17 Aug 2019
06:19 yuri search for other commits by this committer
science/erkale: Fix RUN_DEPENDS

Reported by:	fallout
Original commitRevision:509137 
Monday, 12 Aug 2019
09:33 yuri search for other commits by this committer
science/erkale: correction
Original commitRevision:508717 
09:32 yuri search for other commits by this committer
science/erkale: Update g20190412 -> g20190812
Original commitRevision:508716 
Friday, 26 Jul 2019
20:46 gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
Original commitRevision:507372 
Wednesday, 17 Jul 2019
20:00 danilo search for other commits by this committer
- Update math/armadillo to 9.600.4

Reported by:	Nina Santi
Original commitRevision:506822 
Monday, 22 Apr 2019
13:16 gerald search for other commits by this committer
Related to revision 499061 bump ports with USES=fortran to have them
benefit from the improved situation where libgcc_s is only used when
absolutely necessary.

Suggested by:	tijl
Original commitRevision:499638 
Saturday, 13 Apr 2019
22:23 yuri search for other commits by this committer
science/erkale: Update g20190318 -> g20190412
Original commitRevision:498840 
Friday, 29 Mar 2019
22:20 linimon search for other commits by this committer
Mark as broken on aarch64: fails to configure:

  clang-8: error: no such file or directory: 'NOTFOUND'

Approved by:	portmgr (tier-2 blanket)
Original commitRevision:497214 
Thursday, 21 Mar 2019
06:17 yuri search for other commits by this committer
science/erkale: Update g20190118 -> g20190318

Bug fixes and documentation update.
Original commitRevision:496418 
Wednesday, 20 Mar 2019
12:23 jbeich search for other commits by this committer
Switch to devel/llvm80 for DEFAULT_VERSIONS

PR:		235215
Original commitRevision:496337 
Saturday, 16 Feb 2019
13:19 antoine search for other commits by this committer
Remove bogus dependency, erkale links against libomp from llvm
Original commitRevision:493043 
Friday, 18 Jan 2019
16:25 yuri search for other commits by this committer
science/erkale: Update 0c285c1 -> 4bd3930
Original commitRevision:490641 
Thursday, 17 Jan 2019
09:40 yuri search for other commits by this committer
science/erkale: Update 0927d8c -> 0c285c1

Port changes:
* Add the standard location for erkale's pseudopotentials.
* Add pkg-message suggesting to install erkale-pseudopotentials
Original commitRevision:490535 
Saturday, 5 Jan 2019
22:46 sunpoet search for other commits by this committer
Update science/hdf5 to 1.10.4

- Bump PORTREVISION of dependent ports for shlib change

Changes:	https://portal.hdfgroup.org/display/support/HDF5%201.10.4#releasenotes
PR:		233070
Submitted by:	wen
Original commitRevision:489412 
Tuesday, 25 Dec 2018
20:25 tcberner search for other commits by this committer
Change cmake default behaviour to outsource.

Ports that build out of source now simply can use "USES=cmake"
instead of "USES=cmake:outsource". Ports that fail to build
out of source now need to specify "USES=cmake:insource".

I tried to only set insource where explictely needed.

PR:		232038
Exp-run by:	antoine
Original commitRevision:488341 
Saturday, 22 Dec 2018
08:33 yuri search for other commits by this committer
science/erkale: BROKEN on i386

Reported by:	fallout
Original commitRevision:488078 
Sunday, 16 Dec 2018
09:21 yuri search for other commits by this committer
science/erkale: Please approve flavorization: serial and parallel

Allow to concurrently build and install both serial and parallel versions.

Approved by:	portmgr
Differential Revision:	D18315
Original commitRevision:487568 
Wednesday, 12 Dec 2018
01:35 gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
Original commitRevision:487272 
Sunday, 11 Nov 2018
13:32 danilo search for other commits by this committer
- Update math/armadillo to 9.200.4
Original commitRevision:484691 
Sunday, 21 Oct 2018
17:56 yuri search for other commits by this committer
New port: science/erkale: Quantum chemistry program to solve the electronic
structure of atoms
Original commitRevision:482718 

Number of commits found: 55