notbugAs an Amazon Associate I earn from qualifying purchases.
Want a good read? Try FreeBSD Mastery: Jails (IT Mastery Book 15)Want a good monitor light? See my photosAll times are UTC		 Ukraine
This referral link gives you 10% off a Fastmail.com account and gives me a discount on my Fastmail account.

Get notified when packages are built

A new feature has been added. FreshPorts already tracks package built by the FreeBSD project. This information is displayed on each port page. You can now get an email when FreshPorts notices a new package is available for something on one of your watch lists. However, you must opt into that. Click on Report Subscriptions on the right, and New Package Notification box, and click on Update.

Finally, under Watch Lists, click on ABI Package Subscriptions to select your ABI (e.g. FreeBSD:14:amd64) & package set (latest/quarterly) combination for a given watch list. This is what FreshPorts will look for.

Port details on branch 2022Q3
lm Software for sampling trajectories of the reaction-diffusion equations
2.3.0_11 science Deleted on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 2.3.0_11Version of this port present on the latest quarterly branch.
Broken BROKEN: unfetchable
Deprecated DEPRECATED: Broken for more than 6 months
Expired This port expired on: 2020-08-26
Ignore IGNORE: is marked as broken: unfetchable
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2018-09-09 20:57:45
Last Update: 2020-08-27 11:25:47
SVN Revision: 546333
License: UIUC_OPEN_SOURCE_LICENSE
WWW:
http://www.scs.illinois.edu/schulten/lm/
Description:
Lattice Microbes is a software package for efficiently sampling trajectories from the chemical and reaction-diffusion master equations (CME/RDME) on high performance computing (HPC) infrastructure using both exact and approximate methods. pyLM is a problem solving environment written in Python that leverages the high-performance nature of the Lattice Microbes package while providing ease of use for common stochastic simulations and high customizability for complex biological applications. WWW: http://www.scs.illinois.edu/schulten/lm/
Homepage    cgit ¦ GitHub ¦ GitHub ¦ GitLab ¦ SVNWeb

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (32 items)
Collapse this list.
  1. /usr/local/share/licenses/lm-uiuc-2.3.0_11/catalog.mk
  2. /usr/local/share/licenses/lm-uiuc-2.3.0_11/LICENSE
  3. /usr/local/share/licenses/lm-uiuc-2.3.0_11/UIUC_OPEN_SOURCE_LICENSE
  4. bin/lm
  5. bin/lm-mpmpd
  6. bin/lm_python
  7. bin/lm_setdm
  8. bin/lm_setp
  9. bin/lm_setrm
  10. lib/lm/_lm.so
  11. lib/lm/lm.py
  12. lib/python/pyLM/CME.py
  13. lib/python/pyLM/LMLogger.py
  14. lib/python/pyLM/RDME.py
  15. lib/python/pyLM/__init__.py
  16. lib/python/pyLM/ipyInterface.py
  17. lib/python/pyLM/units.py
  18. lib/python/pySTDLM/CellArranger.py
  19. lib/python/pySTDLM/Cells.py
  20. lib/python/pySTDLM/Distributions.py
  21. lib/python/pySTDLM/NetworkVisualization.py
  22. lib/python/pySTDLM/OnTheFly.py
  23. lib/python/pySTDLM/PostProcessing.py
  24. lib/python/pySTDLM/SBMLReader.py
  25. lib/python/pySTDLM/StandardCells.py
  26. lib/python/pySTDLM/StandardReactionSystems.py
  27. lib/python/pySTDLM/StandardReactions.py
  28. lib/python/pySTDLM/__init__.py
  29. @comment lib/vmd/plugins/%%VMD_ARCH%%/molfile/lmplugin.so
  30. @owner
  31. @group
  32. @mode
Collapse this list.
Dependency lines:
  • lm-uiuc>0:science/lm
No installation instructions:
This port has been deleted.
PKGNAME: lm-uiuc
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1536517852 SHA256 (lm-2.3.0-src.tar.gz) = c1a7908997e46c6590e179a4a269cbaddaab8533c7b9b3c9ff2297f5fd6dbe0c SIZE (lm-2.3.0-src.tar.gz) = 7657245
No package information for this port in our database
Sometimes this happens. Not all ports have packages.
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. swig : devel/swig
  2. arrayobject.h : math/py-numpy@py37
  3. gmake>=4.3 : devel/gmake
  4. gfortran9 : lang/gcc9
  5. python3.7 : lang/python37
  6. as : devel/binutils
Runtime dependencies:
  1. gfortran9 : lang/gcc9
  2. python3.7 : lang/python37
Library dependencies:
  1. libhdf5.so : science/hdf5
  2. libprotobuf.so : devel/protobuf
  3. libsz.so : science/szip
  4. libmpich.so : net/mpich
  5. libintl.so : devel/gettext-runtime
There are no ports dependent upon this port
Configuration Options:
===> The following configuration options are available for lm-uiuc-2.3.0_11: MPI=on: MPI (Message Passing Interface) support PYTHON=on: Python bindings or support VMD=off: Build the VMD plugin ===> Use 'make config' to modify these settings
Options name:
N/A
USES:
compiler:c++11-lang gettext-runtime gmake fortran python
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. http://scs.illinois.edu/schulten/lm/download/lm23/
Collapse this list.

There are no commits on branch 2022Q3 for this port
Login
User Login
Create account

Servers and bandwidth provided by
New York Internet, iXsystems, and RootBSD

This site
What is FreshPorts?
About the authors
Issues
FAQ
How big is it?
Security Policy
Privacy
Blog
Contact

Search
Enter Keywords:
 
more...

Latest Vulnerabilities
ruby31Apr 23
ruby32Apr 23
ruby33Apr 23
glpiApr 22
glpiApr 22
glpiApr 22
sdl2_soundApr 22
chromiumApr 21
ungoogled-chromiumApr 21
clamavApr 19
jenkinsApr 19
jenkins-ltsApr 19
electron27Apr 18
electron28Apr 18
electron29Apr 18

19 vulnerabilities affecting 277 ports have been reported in the past 14 days

* - modified, not new

All vulnerabilities

Last processed:
2024-04-24 03:12:49 UTC


Ports
Home
Categories
Deleted ports
Sanity Test Failures
Newsfeeds

Statistics
Graphs
NEW Graphs (Javascript)

Calculated hourly:
Port count 32217
Broken 86
Deprecated 180
Ignore 217
Forbidden 2
Restricted 2
No CDROM 1
Vulnerable 40
Expired 5
Set to expire 154
Interactive 0
new 24 hours 1
new 48 hours3
new 7 days15
new fortnight24
new month124
Servers and bandwidth provided by
New York Internet, iXsystems, and RootBSD 		Valid HTML, CSS, and RSS. Copyright © 2000-2024 Dan Langille. All rights reserved.