| Port details on branch 2022Q3 |
- py-gemmi Macromolecular crystallography library and utilities
- 0.6.5 science
 =0      0.6.5Version of this port present on the latest quarterly branch. - Maintainer: yuri@FreeBSD.org
- Port Added: 2022-10-04 01:36:50
- Last Update: 2024-02-18 10:07:54
- Commit Hash: 555dead
- Also Listed In: python
- License: MPL20
- WWW:
- https://gemmi.readthedocs.io/en/latest/
- Description:
- Gemmi is a library, accompanied by a set of programs, developed primarily for
use in macromolecular crystallography (MX). For working with:
* macromolecular models (content of PDB, PDBx/mmCIF and mmJSON files),
* refinement restraints (CIF files),
* reflection data (MTZ and mmCIF formats),
* data on a 3D grid (electron density maps, masks, MRC/CCP4 format)
* crystallographic symmetry.
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- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}gemmi>0:science/py-gemmi@${PY_FLAVOR}
- To install the port:
- cd /usr/ports/science/py-gemmi/ && make install clean
- To add the package, run one of these commands:
- pkg install science/py-gemmi
- pkg install py39-gemmi
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py39-gemmi listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py39-gemmi
- Package flavors (<flavor>: <package>)
- distinfo:
- TIMESTAMP = 1708246407
SHA256 (project-gemmi-gemmi-v0.6.5_GH0.tar.gz) = 9159506a16e0d22bbeeefc4d34137099318307db1b2bebf06fb2ae501571b19c
SIZE (project-gemmi-gemmi-v0.6.5_GH0.tar.gz) = 1785842
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py39-pip>0 : devel/py-pip@py39
- py39-pybind11>0 : devel/py-pybind11@py39
- py39-wheel>0 : devel/py-wheel@py39
- pybind11>=2.6 : devel/pybind11
- cmake : devel/cmake-core
- ninja : devel/ninja
- python3.9 : lang/python39
- Test dependencies:
-
- py39-biopython>0 : biology/py-biopython@py39
- python3.9 : lang/python39
- Runtime dependencies:
-
- python3.9 : lang/python39
- Library dependencies:
-
- libgemmi_cpp.so : science/gemmi
- There are no ports dependent upon this port
Configuration Options:- No options to configure
- Options name:
- science_py-gemmi
- USES:
- cmake compiler:c++20-lang localbase:ldflags python
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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