non port: science/py-pymol/Makefile |
Number of commits found: 38 |
Sunday, 29 Oct 2023
|
20:37 Jason E. Hale (jhale)
Revert "science/py-pymol: Mark DEPRECATED"
This reverts commit c3da27075a6d38d1c3659a242245c519a6756165.
devel/py-qt5-pyqt is no longer marked DEPRECATED. This port does not
require python bindings for www/qt5-webkit.
4731af6 |
Saturday, 28 Oct 2023
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14:39 Muhammad Moinur Rahman (bofh)
science/py-pymol: Mark DEPRECATED
- Depends on deprecated devel/py-qt5-pyqt
- Set EXPIRATION_DATE 2023-11-28
Approved by: portmgr (blanket)
c3da270 |
Thursday, 19 Oct 2023
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07:07 Robert Clausecker (fuz)
science/py-pymol: fix build on targets without OpenMP
armv7 still doesn't have it, so disable OpenMP there to make the port
build. The previous problem from PR 262208 seems to no longer occur.
Approved by: portmgr (build fix blanket)
MFH: 2023Q4
c07e560 |
Tuesday, 27 Jun 2023
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19:34 Rene Ladan (rene)
all: remove explicit versions in USES=python for "3.x+"
The logic in USES=python will automatically convert this to 3.8+ by
itself.
Adjust two ports that only had Python 3.7 mentioned but build fine
on Python 3.8 too.
finance/quickfix: mark BROKEN with PYTHON
libtool: compile: c++ -DHAVE_CONFIG_H -I. -I../.. -I -I. -I.. -I../.. -I../C++
-DLIBICONV_PLUG -DPYTHON_MAJOR_VERSION=3 -Wno-unused-variable
-Wno-maybe-uninitialized -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong
-fno-strict-aliasing -DLIBICONV_PLUG -Wall -ansi
-Wno-unused-command-line-argument -Wpointer-arith -Wwrite-strings
-Wno-overloaded-virtual -Wno-deprecated-declarations -Wno-deprecated -std=c++0x
-MT _quickfix_la-QuickfixPython.lo -MD -MP -MF
.deps/_quickfix_la-QuickfixPython.Tpo -c QuickfixPython.cpp -fPIC -DPIC -o
.libs/_quickfix_la-QuickfixPython.o
warning: unknown warning option '-Wno-maybe-uninitialized'; did you mean
'-Wno-uninitialized'? [-Wunknown-warning-option]
QuickfixPython.cpp:175:11: fatal error: 'Python.h' file not found
^~~~~~~~~~
1 warning and 1 error generated.
Reviewed by: portmgr, vishwin, yuri
Differential Revision: <https://reviews.freebsd.org/D40568>
3d9a815 |
Tuesday, 25 Apr 2023
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15:17 Christian Weisgerber (naddy)
audio/opus: bump consumers after update to 1.4
feb1fa3 |
Sunday, 23 Apr 2023
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09:09 Gerald Pfeifer (gerald)
*: Bump PORTREVISIONs for math/mpc update to 1.3.1
8d3e020 |
Sunday, 27 Nov 2022
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21:03 Yuri Victorovich (yuri)
science/py-pymol: Update 2.4.0 -> 2.5.0-97
a2b852e |
Sunday, 16 Oct 2022
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21:10 Adam Weinberger (adamw)
devel/msgpack: Update and split into C and C++ versions
Upstream now provides msgpack as two separate distributions: a C version
with the traditional libmsgpackc.so library, and a header-only C++
version.
devel/msgpack is now devel/msgpack-c and devel/msgpack-cxx, and its
consumers now point to one or both. Note that it is entirely possible
for both to be required. PORTREVISION bump for all consumers.
In my testing, it's not clear that the MSGPACK option in the mariadb
ports actually does anything. I don't think mariadb is actually linking
against msgpack, even before this commit.
9e03d99 |
Sunday, 11 Sep 2022
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10:20 Felix Palmen (zirias)
Mk/Uses: always use colon for build/run suffix
Most USES use a colon for build/run(/test) suffixes. Change kde.mk,
qt.mk and pyqt.mk to do the same, and update all ports using that.
Document in CHANGES.
PR: 266034
Exp-run by: antoine
Approved by: tcberner (mentor)
Differential Revision: https://reviews.freebsd.org/D36349
ddae4e9 |
Wednesday, 7 Sep 2022
|
21:10 Stefan Eßer (se)
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
This commit implements such a proposal and moves one of the WWW: entries
of each pkg-descr file into the respective port's Makefile. A heuristic
attempts to identify the most relevant URL in case there is more than
one WWW: entry in some pkg-descr file. URLs that are not moved into the
Makefile are prefixed with "See also:" instead of "WWW:" in the pkg-descr
files in order to preserve them.
There are 1256 ports that had no WWW: entries in pkg-descr files. These
ports will not be touched in this commit.
The portlint port has been adjusted to expect a WWW entry in each port
Makefile, and to flag any remaining "WWW:" lines in pkg-descr files as
deprecated.
Approved by: portmgr (tcberner)
b7f0544 |
Wednesday, 20 Jul 2022
|
14:22 Tobias C. Berner (tcberner)
science: remove 'Created by' lines
A big Thank You to the original contributors of these ports:
* Andreas Fehlner <fehlner@gmx.de>
* Brad Huntting <huntting@glarp.com>
* Chao Shin <quakelee@cn.FreeBSD.org>
* Cheng-Lung Sung <clsung@FreeBSD.org>
* Chia-Hsing Yu <me@davidyu.org>
* Chris Rees <utisoft@gmail.com>
* David Naylor <dbn@FreeBSD.org>
* Dmitry Sivachenko <demon@FreeBSD.org>
* Ed Schouten <ed@FreeBSD.org>
* Eric Freeman <freebsdports@chillibear.com>
* Erik B Knudsen
* Fernan Aguero <fernan@iib.unsam.edu.ar>
* Frederic Culot <frederic@culot.org>
* Gea-Suan Lin <gslin@gslin.org>
* Glenn Johnson
* Greg Lewis <glewis@FreeBSD.org>
* Igor Serikov <iserikov@acm.org>
* Johannes Dieterich <dieterich@ogolem.org>
* Johannes Dieterich <jmd@FreeBSD.org>
* Johannes M Dieterich <jmd@FreeBSD.org>
* Johannes Meixner <johannes@perceivon.net>
* Ju Pengfei <jupengfei@gmail.com>
* Kay Lehmann <kay_lehmann@web.de>
* Klaus Aehlig <aehlig@linta.de>
* Kurt Kanzenbach <kurt@kmk-computers.de>
* Leland Wang <llwang@infor.org>
* Li-Lun Wang <llwang@infor.org>
* Markus Brueffer <markus@FreeBSD.org>
* NAKATA Maho <maho@FreeBSD.org>
* NAKATA, Maho <maho@FreeBSD.org>
* Nakata Maho <chat95@mbox.kyoto-inet.or.jp>
* Nakata Maho <maho@FreeBSD.org>
* Pav Lucistnik <pav@FreeBSD.org>
* Pav Lucistnik <pav@oook.cz>
* Pedro F. Giffuni
* Pedro F. Giffuni <giffunip@tutopia.com>
* Pedro Giffuni
* Pedro Giffuni <giffunip@asme.org>
* Po-Chuan Hsieh <sunpoet@FreeBSD.org>
* Rong-En Fan <rafan@FreeBSD.org>
* Ryo MIYAMOTO <rmiya@cc.hirosaki-u.ac.jp>
* Seamus Venasse <svenasse@polaris.ca>
* Shin'ya Murakami <murakami@ahs.scitec.kobe-u.ac.jp>
* Shin-ya MURAKAMI <murashin@gfd-dennou.org>
* Shin-ya Murakami <murashin@gfd-dennou.org>
* Stas Timokhin <devel@stasyan.com>
* Stephen Montgomery-Smith <stephen@math.missouri.edu>
* Steve Wills <steve@mouf.net
* Steve Wills <steve@mouf.net>
* Sunpoet Po-Chuan Hsieh <sunpoet@FreeBSD.org>
* Sunpoet Po-Chuan Hsieh <sunpoet@sunpoet.net>
* TAKATSU Tomonari <tota@FreeBSD.org>
* TAOKA Fumiyoshi
* Thierry Thomas <thierry@pompo.net>
* Tim Cas <ports@stdrand.com>
* Uffe Jakobsen <uffe@uffe.org>
* Veniamin Gvozdikov <vg@FreeBSD.org>
* Vsevolod Stakhov <vsevolod@highsecure.ru>
* Wen Heping <wen@FreeBSD.org>
* Wen Heping <wenheping@gmail.com>
* Wen heping <wenheping@gmail.com>
* Ying-Chieh Liao <ijliao@FreeBSD.org>
* Yuri Victorovich <yuri@rawbw.com>
* anholt@FreeBSD.org
* bacon@smithers.neuro.mcw.edu
* batman <batman@udel.edu>
* db
* gurkan@phys.ethz.ch
* ijliao
* jbacon
* maintainer.freebsd@xpoundit.com
* mi
* rafan@infor.org
* shurd@FreeBSD.org
* thierry@pompo.net
* will
With hat: portmgr
4619604 |
Sunday, 10 Apr 2022
|
19:11 Charlie Li (vishwin)
textproc/libxml2: bump all LIB_DEPENDS consumers
This is a separate commit to facilitate easier cherry-picking for
quarterly.
PR: 262853, 262940, 262877, 263126
Approved by: fluffy (mentor)
d63665f |
Saturday, 26 Mar 2022
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08:27 Matthias Fechner (mfechner)
textproc/libxml2: bump all dependencies
This should make sure that all dependent ports will pick
up the new version commited with a13ec21cd733f67a9fc0dc00ab45268bdc236246
247c7db |
Monday, 7 Mar 2022
|
17:39 Loïc Bartoletti (lbartoletti)
devel/py-qt5, devel/py-sip: Update versions
- Update sip to 6.5.1
- Update PyQt5 to 5.15.6
- Update PyQtChart, PyQtNetworkAuth and PyQtWebengine to 5.15.5
- Update PyQtSip to 12.9.1
- Update PyQtBuilder to 1.12.2
- Add ${_MAKE_JOBS} for pyqt.mk (reported by Tatsuki Makino)
PR: 261685
Exp-run by: antoine
2d8f8573 |
Thursday, 27 Jan 2022
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06:12 Loïc Bartoletti (lbartoletti)
PyQt: Update sip to 6.5.0, reintroduce sip4 and simplify PyQt framework.
SIP:
As mentioned in the update from sip to sip5, this is a transitional version
to remove what is deprecated in sip4.
Sip6 completely removes the deprecated parts.
Unfortunately, some ports — mostly cura things — can not use sip6, so we
reintroduce sip4.
PyQt:
At the same time, we took the opportunity to simplify PyQT and propose only one
package as for devel/pyside2. */py-qt5-* have been merged — excepted chart,
networkauth and webengine — into devel/py-qt5-pyqt.
This allows us to be in adequacy with the packages that the author of these
libraries proposes, namely:
PyQt - devel/py-qt5-pyqt
PyQt-Charts - x11-toolkits/py-qt5-chart
PyQt-NetworkAuth – net/py-qt5-networkauth
PyQt-WebEngine – www/py-qt5-webengine
SIP – devel/py-sip
py-sip - devel/py-qt5-sip
PyQt-builder - devel/py-qtbuilder
Qscintilla - devel/py-qt5-qscintilla2
Reviewed by: diizzy, kde
Tested by: kai, rhurlin, arrowd, madpilot
Approved by: makc, tcberner, kde
Differential Revision: https://reviews.freebsd.org/D33237
Exp-run by: antoine
4f0a5e1 |
Tuesday, 22 Jun 2021
|
18:53 Kevin Bowling (kbowling)
graphics/mesa-libs: Bump reverse deps for libglvnd
Per discussion with bapt on helping pkg handle the changing of these
deps and avoiding impossible upgrade senarios.
PR: 246767
Reviewed by: manu, bapt
Approved by: x11
Differential Revision: https://reviews.freebsd.org/D30824
da3162c |
Tuesday, 6 Apr 2021
|
14:31 Mathieu Arnold (mat)
Remove # $FreeBSD$ from Makefiles.
305f148 |
Friday, 12 Mar 2021
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15:55 amdmi3
- Update math/glm to 0.9.9.8
|
Tuesday, 26 Jan 2021
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14:04 sunpoet
Bump PORTREVISION for science/netcdf shlib change
|
Thursday, 24 Dec 2020
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13:37 fluffy
science/py-pymol: switch to PYTHON_EXT_SUFFIX
|
Friday, 29 May 2020
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08:42 antoine
pymol fails to build with python 2.7
Reported by: pkg-fallout
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Thursday, 21 May 2020
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07:17 yuri
Add CONFLICT between science/py-chempy and science/py-pymol
|
07:14 yuri
science/py-pymol: Update 2.3.0 -> 2.4.0
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Sunday, 23 Feb 2020
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15:25 antoine
Deprecate a few ports
With hat: portmgr
|
Friday, 26 Jul 2019
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20:46 gerald
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.
PR: 238330
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Saturday, 16 Feb 2019
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10:32 antoine
Unbreak INDEX
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Tuesday, 12 Feb 2019
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06:52 yuri
science/py-pymol: Update 2.2.0 -> 2.3.0
Reported by: portscout
|
Wednesday, 16 Jan 2019
|
11:13 tijl
Fix Qt5 symbol version scripts to put the catch-all clause first. When
a symbol matches multiple clauses the last one takes precedence. If the
catch-all is last it captures everything. In the case of Qt5 libraries
this caused all symbols to have a Qt_5 label while some should have
Qt_5_PRIVATE_API. This only affects lld because GNU ld always gives the
catch-all lowest priority.
Older versions of Qt5Webengine exported some memory allocation symbols from
the bundled Chromium. Version 5.9 stopped exporting these [1] but the
symbols were kept as weak wrappers for the standard allocation functions to
maintain binary compatibility. [2][3] The problem is that the call to the
standard function in these weak wrappers is only resolved to the standard
function if there's a call to this standard function in other parts of
Qt5Webengine, because only then is there a non-weak symbol that takes
precedence over the weak one. If there's no such non-weak symbol the call
in the weak wrapper resolves to the weak wrapper itself creating an infinite
call loop that overflows the stack and causes a crash. Some of the
allocation functions are variants of C++ new and delete and it probably
depends on the compiler whether these variants are used in other parts of
Qt5Webengine.
Remove the weak wrappers (make them Linux specific). This isn't binary
compatible but we are already breaking that with the changes to the symbol
versions.
[1]
https://github.com/qt/qtwebengine/commit/5c2cbfccf9aafb547b0b30914c4056abd25942a4
[2]
https://github.com/qt/qtwebengine/commit/2ed5054e3a800fa97c2c9e920ba1e6ea4b6ef2a5
[3]
https://github.com/qt/qtwebengine/commit/009f5ebb4bd6e50188671e0815a5dae6afe39db5
Bump all ports that depend on Qt5.
PR: 234070
Exp-run by: antoine
Approved by: kde (adridg)
|
Wednesday, 12 Dec 2018
|
01:35 gerald
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.
PR: 231590
|
Thursday, 22 Nov 2018
|
20:18 tcberner
pyqt: Change install directories for Python flavor support
* PyQt could not be installed for multiple Python versions at
the same time, as there were conflicting files.
This patch creates Python-version versioned directories for
all these, and further installs binaries with a version number.
* Note, there might be some hickups for software that depends on
on of the .so's provided by PyQt5, which might not be found
anymore autmotically, and maybe need some LD-flaggery.
* Update PyQt5 to 5.10.1
* Mark www/py-qt5-webengine broken. It is unforuntately no longer
compatible with the old qt5-webengine-5.9.4 we ship.
PR: 232745
Exp-run by: antoine
Differential Revision: https://reviews.freebsd.org/D8714
|
Monday, 17 Sep 2018
|
20:48 yuri
science/py-pymol: Update 2.1.0 -> 2.2.0
Moved to GitHub.
Also update WWW.
|
Sunday, 29 Jul 2018
|
22:18 gerald
Bump PORTREVISION for ports depending on the canonical version of GCC
in the ports tree (via Mk/bsd.default-versions.mk and lang/gcc) which
has now moved from GCC 6 to GCC 7 by default.
This includes ports
- featuring USE_GCC=yes or USE_GCC=any,
- featuring USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and those
- with USES=compiler specifying one of openmp, nestedfct, c11, c++0x,
c++11-lib, c++11-lang, c++14-lang, c++17-lang, or gcc-c++11-lib.
PR: 222542
|
Wednesday, 20 Jun 2018
|
17:05 mat
Use PY_FLAVOR for dependencies.
FLAVOR is the current port's flavor, it should not be used outside of
this scope.
Sponsored by: Absolight
|
Sunday, 22 Apr 2018
|
18:29 sunpoet
Move devel/py-msgpack-python to devel/py-msgpack
- Update to 0.5.6
- Update pkg-descr
- Update WWW
Changes: https://github.com/msgpack/msgpack-python/blob/master/ChangeLog.rst
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Thursday, 22 Mar 2018
|
05:48 yuri
science/py-pymol: Add GUI options QT5 and TK; Add missing dependency NUMPY
Now QT5 is the default, while Tk is still available as a second choice.
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Tuesday, 20 Mar 2018
|
07:53 yuri
science/py-pymol: Update to 2.1.0
Release notes:
https://pymol.org/dokuwiki/?id=media:new21
Port changes:
* Fixed shebang in bin/pymol
* Misc minor changes
Reported by: portscout
|
Tuesday, 19 Dec 2017
|
20:06 antoine
- Canonicalize LIB_DEPENDS
- Limit to python 2.7, the dependencies and the plist are not compatible
with python3
- Cleanup plist
With hat: portmgr (poudriere bulk -a broken)
|
19:49 yuri
Re-added port: science/py-pymol: OpenGL based molecular visualization system
(existed 2002/08/13-2014/09/01, deleted in r366862)
Approved by: adamw (mentor)
Differential Revision: https://reviews.freebsd.org/D12902
|
Number of commits found: 38 |