Current status

Number of commits found XX: 56

Bump PORTREVISION for science/netcdf shlib change

Return dbn's ports to the pool after safekeeping his commit bit.

Add USES=xorg USES=gl, ports categories s

Add USES=xorg and USES=gl to ports in categories starting with 's'
While here, try to sprinkle other USES (mostly gnome and sdl) as needed.

science/vmd: Add USES=gl

Pet portlint, group USExx lines.

PR:		237066
Approved by:	dbn (maintainer's timeout 4+ months)

Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330

Update science/netcdf to 4.6.3

- Bump PORTREVISION of dependent ports for shlib change

Changes:	https://github.com/Unidata/netcdf-c/releases
		https://github.com/Unidata/netcdf-c/blob/master/RELEASE_NOTES.md

Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590

science/vmd: Remove RESTRICTED: not required

Reported by:	mat
Approved by:	portmgr

science/vmd: License auto-accept -> no-auto-accept

VMD license requires specific acknowledgement if VMD is used for published
results, therefore no auto-accept.

science/vmd: Add RESTRICTED clause.

This software comes from the University of Illinois, same as science/namd,
and is for non-commercial use only.

Also add it to ports/LEGAL.

Approved by:	portmgr blanket

Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079).

Update to 4.5.0

- Pet portlint: reorder LICENSE knobs

Changes:	https://github.com/Unidata/netcdf-c/releases

science/vmd: various fixes

 - fix spelling of VMD license [1]
 - use USES=tcl,tk instead of direct dependency
 - patch vmd to support (tcl|tk)86
 - fix shebang for tcl [1]
 - fix detection of netcdf
 - add sqlite as a dependency (for dmsplugin) [1]
 - add expact as a dependency (for hoomdplugin)
 - rework configuration:
   - explicitly list required components (CONFIGURE_ARGS)
   - call configure directly (instead of via gmake(1))
   - patch configure to accept TCLLDFLAGS and TKLDFLAGS
   - pass PREFIX as an environment variable instead of using sed(1)
   - patch Make-arch to accept environment TCLLDFLAGS and NETCDFLDFLAGS
 - add support for parallel building (except for building plugins)
 - bump PORTREVISION

PR:		219642
Reported by:	Yuri Victorovich <yuri@rawbw.com>

Revision bump of all ports with USE_GL after consolidation of mesa-libs

Approved by:	swills (mentor)
Differential Revision:	https://reviews.freebsd.org/D10845

science/vmd: correct the wording of numpy keyword

science/vmd: fix port to depend on numpy.

Reported by:	Ruslan Makhmatkhanov <cvs-src@yandex.ru>

science/vmd: update to 1.9.3

 - update MASTER_SITES to use upstream stride (the old - repackages - sources
   were no longer working).
 - take maintainership: although I don't use the software I am happy to respond
   to PR's and check for updates periodically,
 - add license information for each source:
   - vmd: custom license that requires the user to explicitly download (and
          accept the license before downloading).  Mark the license as
          auto-accept here as the present of the DISTFILE will indicate that
          the license has been accepted
   - tachyon: standard 3-clause BSD license :-)
   - stride: almost BSD license, except only for academic use (i.e.
             non-commersial) and a requirement to report bugs to the author.
             Add a plain text copy of the license file to the port.
   - add missing dependencies: gl, x11
   - fix detection of python.
   - simplify configure patch.
   - update pkg-plist for changes in plugin versions.

Bump PORTREVISIONS for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.8.5 to GCC 4.9.4 (at least under some
circumstances such as versions of FreeBSD or platforms).

In particular that is ports with USE_GCC=yes, USE_GCC=any, or one of
gcc-c++11-lib, openmp, nestedfct, c++11-lib as well as c++14-lang,
c++11-lang, c++0x, c11 requested via USES=compiler.

Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u.

With hat:	portmgr
Sponsored by:	Absolight

3 ports categories: Remove $PTHREAD_LIBS

Categories: print, science, emulators

approved by:	PTHREAD blanket

science/vmd: Improve cc/gcc replacement patterns for Makefiles

PR:		197103
Submitted by:	Sakaue Mamoru

science/vmd: Unbreak on F10+

This patch removes the hardcoded "gcc" so that it works with USE_GCC
variable.  There is a slightly newer version of vmd available, so a
version upgrade may soon follow.

PR:		197103
Submitted by:	Sakaue Mamoru

Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)

Stage science/vmd

I clobbered the Makefile diff (sorry danfe@).  The entire makefile was
tabbed over 3 times.  There was also no respect for 80 columns so a good
part of the clobber came from line wrapping.  I also made $TAR use
real switches (e.g. -xzf) rather than undocumented by supported (zxf)

This is another manual package / obtain restricted data files/ only port
so I can't test much of it.

PR:		193090
Submitted by:	turutani (Kyoto)

Reset maintainership for ports not staged with no pending PR

With hat:	portmgr

Remove indefinite articles and trailing periods from COMMENT, plus
minor COMMENT typos and surrounding whitespace fixes. A few Makefiles
where not included as they contain Latin-1 characters that break
the Phabricator workflow. Categories P-S.

CR:		D422
Approved by:	portmgr (bapt)

Convert GMAKE to MAKE_CMD
Please note that lots of invocation of MAKE_CMD here are wrong as they do not
properly respect MAKE_ENV and friends

With hat:	portmgr

Remove all space characters from Makefile assignments.

No functional changes included.

CR:		D193 (except math/sedumi)
Approved by:	portmgr (bapt)

- Update to 4.3.2 (from science/netcdf4)
- Bump PORTREVISION for science/netcdf shlib change and
  dependency change from science/netcdf4 to science/netcdf [1]

Changes:	http://www.unidata.ucar.edu/software/netcdf/docs/release_notes.html
Approved by:	portmgr (bapt) [1]

Add NO_STAGE all over the place in preparation for the staging support (cat:
science)

- convert to the new perl5 framework
- convert USE_GMAKE to Uses

Approved by:	portmgr (bapt@, blanket)

- Remove bogus conditional IGNORE for PACKAGE_BUILDING; these should
  be IGNOREd regardless of PACKAGE_BUILDING. Soem have no MASTER_SITES
  and require manual fetching, others are already marked RESTRICTED.
- Trim headers
- Convert some pre-fetch errors into IGNORE
- Remove needless quoting in java/jdk7-doc IGNORE

With hat:	portmgr

Fix minor nit: use the canconical FreeBSD.org form for email addresses.
This was causing me issues when attempting to gather certain statistics.

While here trim header

Approved by:	miwi, adrian, tj
No objection from:	db, bjk, cperciva, scheidell, osa

Update to 1.9.1.

Submitted by:   bjk

re-assignment of echo_msg breaks 'make readme'
unbreak

PR: ports/163257
Submitted by: Jason Helfman <jhelfman@experts-exchange.com>
Approved by: maintainer, crees (mentor)

- Add files/patch-bin_vmd.csh, files/patch-bin_vmd.sh
  to fix a runtime error (the "ARCH" value is not set)
- Bump PORTREVISION
- Remove MD5 checksum from distinfo
- Set ONLY_FOR_ARCHS (i386 and amd64)

PR:             ports/152955
Submitted by:   Benjamin Kaduk <kaduk-fbsd at mit.edu> (maintainer)

- update to 1.4.1
Reviewed by:    exp8 run on pointyhat
Supported by:   miwi

- Chase x11-toolkits/fltk update

- Remove comments from IGNORE section. Left in by mistake with last commit.

Feature safe:   yes

- Update to 1.8.7
- Pass maintainer to submitter

PR:             ports/142513
Submitted by:   Ben Kaduk <kaduk@mit.edu>
Feature safe:   yes

- update to jpeg-8

- bump all port that indirectly depends on libjpeg and have not yet been bumped
or updated
Requested by:   edwin

Relinquish maintainership at maintainer's request.

Approved by:    portmgr (self)

- Remove unneeded dependency from gtk12/gtk20 [1]
- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG
- Remove X11BASE support in favor of LOCALBASE or PREFIX
- Use USE_LDCONFIG instead of INSTALLS_SHLIB
- Remove unneeded USE_GCC 3.4+

Thanks to all Helpers:
        Dmitry Marakasov, Chess Griffin, beech@, dinoex, rafan, gahr,
        ehaupt, nox, itetcu, flz, pav

PR:             116263
Tested on:      pointyhat
Approved by:    portmgr (pav)

- Move from versioned tcl/tk CATEGORIES to simple tcl and tk categories

With hat:       portmgr

- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.

NO_PACKAGE and NO_CDROM are superfluous here

Remove USE_REINPLACE from all categories starting with S

- Group master sites with distfiles

PR:             ports/87078
Submitted by:   Sangwoo Shim <borishim@gmail.com> (maintainer)

Add B-Dep on imake
Update Maintainer email

PR:             86419
Submitted by:   Sangwoo Shim <sangwoos@gmail.com>

Upgrade to 1.8.3.

PR:             ports/80682
Submitted by:   maintainer.

- Fix build/run on amd64.

PR:             ports/76941
Submitted by:   Sangwoo Shim <ssw@neo.redjade.org> (maintainer)

Reassign maintainer to Sangwoo Shim <ssw@neo.redjade.org>

Requested by:   old maintainer

Add missing files.

PR:             ports/75342
Submitted by:   maintainer.

Fix build in presence of x11/nvidia-driver

PR:             ports/71052
Submitted by:   Stephen Montgomery-Smith (maintainer)

Add vmd, a molecular visualization program for displaying, animating, and
analyzing large biomolecular systems using 3-D graphics and built-in scripting.

PR:             ports/70509
Submitted by:   Stephen Montgomery-Smith <stephen@math.missouri.edu>

Number of commits found XX: 56

13 vulnerabilities affecting 98 ports have been reported in the past 14 days

^* - modified, not new

All vulnerabilities

Last updated:
2021-02-27 01:52:12