FreshPorts -- The Place For Ports If you buy from Amazon USA, please support us by using this link.
Follow us
Blog
Twitter

Please give me your LTO-4 or better tape library and I'll put it to good use.
found something from the cache
non port: head/biology/seqtools/distinfo
SVNWeb

Number of commits found: 11

Thu, 12 Feb 2015
[ 12:04 pi ] Original commit 
378870 biology/seqtools/Makefile
378870 biology/seqtools/distinfo
biology/seqtools: 4.31 -> 4.32

- Blixem
  o Previously-unsupported GFF feature types can now be displayed
    as a new 'basic feature' type.
  o Styles are now applied to the detail view as well as the big
    picture, so feature display is more consistent across the two
    views.
  o Fix a bug where styles were not being applied to
    dynamically-loaded features.
- Dotter
  o Added a 'maximise' button for the greyramp tool.
  o Small fixes to inconsistencies in context-sensitive menus and
    keyboard shortcuts.
Sat, 13 Dec 2014
[ 18:10 pi ] Original commit 
374668 biology/seqtools/Makefile
374668 biology/seqtools/distinfo
biology/seqtools: 4.30 -> 4.31

Some changes to sqlite dependencies
Tue, 4 Nov 2014
[ 13:19 pi ] Original commit 
372142 biology/seqtools/Makefile
372142 biology/seqtools/distinfo
biology/seqtools: 4.29 -> 4.30

- Blixem
  o Fix potential crash with internal processing
  o Fix two bugs in data input
Wed, 15 Oct 2014
[ 18:46 pi ] Original commit 
370943 biology/seqtools/Makefile
370943 biology/seqtools/distinfo
370943 biology/seqtools/pkg-plist
biology/seqtools: 4.28 -> 4.29

- Blixem
  o Added the facility to run Dotter on an ad-hoc sequence (RT:408836).
  o Added the facility to run Dotter against a transcript.
- Dotter
  Minimise the greyramp tool to a simple contrast slider. Use
  Ctrl-G to toggle between this and the full greyramp tool.
- Belvu
  Fix a bug with tree bootstrapping in Belvu.
Thu, 31 Jul 2014
[ 03:17 pi ] Original commit 
363530 biology/seqtools/Makefile
363530 biology/seqtools/distinfo
biology/seqtools: 4.27 -> 4.28
Sat, 12 Jul 2014
[ 18:56 pi ] Original commit 
361635 biology/seqtools/Makefile
361635 biology/seqtools/distinfo
biology/seqtools: 4.26 -> 4.27
Fri, 2 May 2014
[ 19:00 pi ] Original commit 
352838 biology/seqtools/Makefile
352838 biology/seqtools/distinfo
biology/seqtools: 4.25 -> 4.26, fix broken distinfo by upgrading

Submitted by:   pi (myself)
Approved by:    jadawin (mentor)
Thu, 1 May 2014
[ 16:50 pi ] Original commit 
352761 biology/seqtools/Makefile
352761 biology/seqtools/distinfo
biology/seqtools: 4.24 -> 4.25

PR:             ports/186299
Submitted by:   pi (myself)
Approved by:    jadawin (mentor)
Tue, 24 Dec 2013
[ 17:23 wg ] Original commit 
337375 biology/seqtools/Makefile
337375 biology/seqtools/distinfo
biology/seqtools: update to 4.24

PR:		ports/185162
Submitted by:	maintainer
Thu, 14 Nov 2013
[ 20:09 wg ] Original commit 
333786 biology/seqtools/Makefile
333786 biology/seqtools/distinfo
biology/seqtools: update to 4.23

PR:		ports/183960
Submitted by:	maintainer
Sun, 10 Nov 2013
[ 11:01 wg ] Original commit 
333374 MOVED
333374 biology/Makefile
333374 biology/dotter
333374 biology/seqtools
333374 biology/seqtools/Makefile
333374 biology/seqtools/distinfo
333374 biology/seqtools/pkg-descr
333374 biology/seqtools/pkg-plist
biology/seqtools: Tools for visualising sequence alignments

Blixem is an interactive browser of pairwise alignments that have
been stacked up in a "master-slave" multiple alignment; it is not
a 'true' multiple alignment but a 'one-to-many' alignment.

Belvu is a multiple sequence alignment viewer and phylogenetic tool.

Dotter is a graphical dot-matrix program for detailed comparison
of two sequences.

WWW: http://www.sanger.ac.uk/resources/software/seqtools/

PR:		ports/183801
Submitted by:	Kurt Jaeger <fbsd-ports opsec.eu>

Number of commits found: 11

Login
User Login
Create account

Servers and bandwidth provided by
New York Internet, SuperNews, and RootBSD

This site
What is FreshPorts?
About the authors
FAQ
How big is it?
The latest upgrade!
Privacy
Forums
Blog
Contact

Search
Enter Keywords:
 
more...

Latest Vulnerabilities
cross-binutilsMar 24
jenkinsMar 24
jenkins-ltsMar 24
libressl*Mar 24
linux-c6-openssl*Mar 24
mingw32-openssl*Mar 24
mingw64-binutilsMar 24
openssl*Mar 24
firefoxMar 22
firefox-esrMar 22
libxulMar 22
linux-firefoxMar 22
linux-seamonkeyMar 22
seamonkeyMar 22
sympaMar 13

5 vulnerabilities affecting 24 ports have been reported in the past 14 days

* - modified, not new

All vulnerabilities


Ports
Home
Categories
Deleted ports
Sanity Test Failures
Newsfeeds

Statistics
Graphs
NEW Graphs (Javascript)
Traffic

Calculated hourly:
Port count 24726
Broken 132
Deprecated 142
Ignore 418
Forbidden 3
Restricted 203
No CDROM 95
Vulnerable 20
Expired 5
Set to expire 134
Interactive 0
new 24 hours 5
new 48 hours8
new 7 days33
new fortnight44
new month132

Servers and bandwidth provided by
New York Internet, SuperNews, and RootBSD
Valid HTML, CSS, and RSS.
Copyright © 2000-2014 Dan Langille. All rights reserved.