| Port details |
- py-fastTSNE Fast, parallel implementations of t-SNE
- 0.2.13_4 biology
 =0      0.2.13_4Version of this port present on the latest quarterly branch. - Maintainer: yuri@FreeBSD.org
- Port Added: 2018-12-15 09:03:21
- Last Update: 2021-03-13 23:37:12
- SVN Revision: 568296
- Also Listed In: python
- License: BSD3CLAUSE
- WWW:
- https://github.com/pavlin-policar/fastTSNE
- Description:
- Fast, parallel implementations of t-SNE allows, for example, in one case
to visualize 160,796 single cell transcriptomes from the mouse nervous system
computed in under 2 minutes using FFT accelerated interpolation and approximate
nearest neighbors.
WWW: https://github.com/pavlin-policar/fastTSNE
 cgit ¦ GitHub ¦ GitHub ¦ GitLab ¦ 
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}fastTSNE>0:biology/py-fastTSNE@${PY_FLAVOR}
- No installation instructions:
- This port has been deleted.
- PKGNAME: py37-fastTSNE
- Package flavors (<flavor>: <package>)
- distinfo:
- TIMESTAMP = 1544862153
SHA256 (fastTSNE-0.2.13.tar.gz) = c602acf5e61f80bdda1bdfe91838ec89d7fdbdbb072e54c0d8da31c35fc964a0
SIZE (fastTSNE-0.2.13.tar.gz) = 687321
No package information for this port in our database- Sometimes this happens. Not all ports have packages.
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py37-numpy>=1.15,1<1.19,1 : math/py-numpy@py37
- py37-setuptools>0 : devel/py-setuptools@py37
- python3.7 : lang/python37
- Runtime dependencies:
-
- py37-numpy>=1.15,1<1.19,1 : math/py-numpy@py37
- py37-numba>=0.38.1 : devel/py-numba@py37
- py37-scipy>0 : science/py-scipy@py37
- py37-scikit-learn>=0.20.0 : science/py-scikit-learn@py37
- py37-setuptools>0 : devel/py-setuptools@py37
- python3.7 : lang/python37
- Library dependencies:
-
- libfftw3.so : math/fftw3
- There are no ports dependent upon this port
Configuration Options:- No options to configure
- Options name:
- N/A
- USES:
- localbase:ldflags python:3.5+
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
| Port Moves |
- port moved to math/py-openTSNE on 2021-03-13
REASON: project renamed/reimplemented under a different name
|
Number of commits found: 7
| Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
| Commit | Credits | Log message |
|---|
0.2.13_4
13 Mar 2021 23:37:12
  |
yuri |
Move: biology/py-fastTSNE -> math/py-openTSNE
Project was renamed and reimplemented. |
0.2.13_4
08 Mar 2020 21:56:37
|
jbeich |
Drop dependency on devel/openmp
- Drop if devel/llvm* was used as a substitute
Approved by: yuri, rene (earlier version)
Differential Revision: https://reviews.freebsd.org/D23020 |
0.2.13_3
21 Sep 2019 18:59:57
|
jbeich |
devel/openmp: update to 9.0.0
- Connect tests to the framework to help QA remaining patches
- Force rebuild all consumers after https://reviews.llvm.org/D59783
Changes: http://llvm.org/viewvc/llvm-project/openmp/tags/RELEASE_900/final/?view=log
ABI: https://abi-laboratory.pro/tracker/timeline/llvm_openmp/ |
0.2.13_2
26 Jul 2019 20:46:57
|
gerald |
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.
PR: 238330 |
0.2.13_1
08 May 2019 16:05:53
|
jbeich |
devel/openmp: phase out
- Expire after the last version without /usr/lib/libomp.so
- Drop SOVERSION for seamless transition (i.e., avoid conditionals)
PR: 236907
Approved by: bapt (maintainer)
Differential Revision: https://reviews.freebsd.org/D19767 |
0.2.13
31 Mar 2019 16:57:55
|
yuri |
biology/py-fastTSNE: Add the PORTSCOUT line |
0.2.13
15 Dec 2018 08:58:05
|
yuri |
New port: biology/py-fastTSNE: Fast, parallel implementations of t-SNE |
Number of commits found: 7
|
As an Amazon Associate I earn from qualifying purchases.