8490 FreshPorts -- biology/ruby-bio
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Port details
ruby-bio 1.4.1 biology on this many watch lists=0 search for ports that depend on this port
Integrated environment for Bioinformatics written in Ruby
Maintained by: mauricio@arareko.net search for ports maintained by this maintainer
Port Added: 24 Oct 2001 03:21:52
Also Listed In: ruby
License: not specified in port


BioRuby project aims to implement integrated environment for
Bioinformatics by using Ruby.

WWW:	http://bioruby.org/
SVNWeb : Main Web Site : Distfiles Availability : PortsMon

NOTE: FreshPorts displays only required dependencies information. Optional dependencies are not covered.

Required To Build:
  1. lang/ruby18
Required To Run:
  1. lang/ruby18
There are no ports dependent upon this port

To install the port: cd /usr/ports/biology/ruby-bio/ && make install clean
To add the package: pkg_add -r ruby18-bio


Configuration Options
===> The following configuration options are available for ruby18-bio-1.4.1:
     BDB4=off: bdb4 support for faster flat file indexing
     MYSQL=off: MySQL database
     PGSQL=off: PostgreSQL database
     XMLPARSER=off: xmlparser support for faster Blast processing
===> Use 'make config' to modify these settings

Master Sites:
  1. ftp://ftp.FreeBSD.org/pub/FreeBSD/ports/distfiles/ruby/
  2. http://bioruby.org/archive/

Number of commits found: 26

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
18 Mar 2013 06:55:42
Original commit files touched by this commit  1.4.1
jgh search for other commits by this committer
- adoption of optionsNG
- trim historical header

Approved by:	portmgr (miwi)
30 Dec 2010 23:08:47
Original commit files touched by this commit  1.4.1
pgollucci search for other commits by this committer
- Fix pkg-plist, got the wrong version before

Reported by:    pointyhat via pav
27 Dec 2010 15:11:50
Original commit files touched by this commit  1.4.1
pgollucci search for other commits by this committer
- Update to 1.4.1
- Remove MD5

PR:             ports/153394
Submitted by:   myself (pgollucci)
Approved by:    mauricio@arareko.net (maintainer)
Sponsored by:   RideCharge Inc. / TaxiMagic
08 Jun 2010 00:18:54
Original commit files touched by this commit  1.4.0
pgollucci search for other commits by this committer
- Update to 1.4.0
- Sort pkg-plist
- seperate NOPORTDOCS and NOPORTEXAMPLES
24 Oct 2007 01:38:51
Original commit files touched by this commit  1.1.0
clsung search for other commits by this committer
- Update to 1.1.0

PR:             ports/117369
Submitted by:   Motomichi Matsuzaki <mzaki_AT_e-mail dot ne dot jp>
Approved by:    maintainer (Mauricio Herrera Cuadra)
25 Apr 2006 22:09:29
Original commit files touched by this commit  1.0.0
pav search for other commits by this committer
- Update to 1.0.0
- Provide OPTIONS
- Take maintainership

PR:             ports/94123
Submitted by:   Mauricio Herrera Cuadra <mauricio@arareko.net>
24 Nov 2005 00:04:00
Original commit files touched by this commit  0.6.2
pav search for other commits by this committer
- Add SHA256
11 Nov 2005 01:18:01
Original commit files touched by this commit  0.6.2
linimon search for other commits by this committer
With portmgr hat on, reset maintainership of knu's ports since he has
been inactive more than 6 months.  We hope to see him back sometime.
25 Dec 2004 17:52:46
Original commit files touched by this commit  0.6.2
knu search for other commits by this committer
Update to 0.6.2.
06 Jul 2004 14:31:55
Original commit files touched by this commit  0.5.3
vs search for other commits by this committer
Fix distsite

PR:             ports/67473
Submitted by:   Roman Neuhauser
Approved by:    maintainer timeout
29 May 2004 23:03:53
Original commit files touched by this commit  0.5.3
pav search for other commits by this committer
- Update WWW
22 Mar 2004 15:05:32
Original commit files touched by this commit  0.5.3
knu search for other commits by this committer
Add SIZE data.

Submitted by:   trevor
14 Oct 2003 22:25:59
Original commit files touched by this commit  0.5.3
knu search for other commits by this committer
Update to 0.5.3.
22 Aug 2003 22:53:54
Original commit files touched by this commit  0.5.2
knu search for other commits by this committer
Update to 0.5.2.
29 Jul 2003 06:44:28
Original commit files touched by this commit  0.5.1
knu search for other commits by this committer
Update to 0.5.1.
26 Jun 2003 03:34:44
Original commit files touched by this commit  0.5.0
knu search for other commits by this committer
Update to 0.5.0.
18 Feb 2003 04:22:03
Original commit files touched by this commit  0.4.0
knu search for other commits by this committer
De-pkg-comment.
29 Jan 2003 10:45:59
Original commit files touched by this commit  0.4.0
knu search for other commits by this committer
Update to 0.4.0.
06 Oct 2002 20:59:13
Original commit files touched by this commit  0.3.9
knu search for other commits by this committer
Use RUBY_MOD*.
03 Aug 2002 07:02:10
Original commit files touched by this commit  0.3.9
knu search for other commits by this committer
Update to 0.3.9.
07 Jul 2002 18:21:43
Original commit files touched by this commit  0.3.8
knu search for other commits by this committer
Update to 0.3.8.
10 Apr 2002 18:37:18
Original commit files touched by this commit  0.3.6
knu search for other commits by this committer
Update to 0.3.6.
12 Mar 2002 23:12:04
Original commit files touched by this commit
knu search for other commits by this committer
Update to 0.3.5.
21 Dec 2001 21:25:16
files touched by this commit
knu search for other commits by this committer
Update to 0.3.3.    
28 Nov 2001 13:46:31
files touched by this commit
knu search for other commits by this committer
Update to 0.3.2.    
24 Oct 2001 07:21:52
files touched by this commit
knu search for other commits by this committer
Add ruby-bio (BioRuby), an integrated environment for Bioinformatics   written
in Ruby.    

Number of commits found: 26

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