science/hdf: update 4.2.15 → 4.3.0; add JAVA option

The JAVA option is to support the upcoming HDFView port.

MAN[1-5]PREFIX: eleminate its usage  and move man to share/man

*/*: Bump jpeg-turbo users treewide

New major version 3.0.0

*: Bump PORTREVISIONs for math/mpc update to 1.3.1

Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)

Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.

science: remove 'Created by' lines

A big Thank You to the original contributors of these ports:

  *  Andreas Fehlner <fehlner@gmx.de>
  *  Brad Huntting <huntting@glarp.com>
  *  Chao Shin <quakelee@cn.FreeBSD.org>
  *  Cheng-Lung Sung <clsung@FreeBSD.org>
  *  Chia-Hsing Yu <me@davidyu.org>
  *  Chris Rees <utisoft@gmail.com>
  *  David Naylor <dbn@FreeBSD.org>
  *  Dmitry Sivachenko <demon@FreeBSD.org>
  *  Ed Schouten <ed@FreeBSD.org>
  *  Eric Freeman <freebsdports@chillibear.com>
  *  Erik B Knudsen

*/*: Replace science/szip with science/libaec

- Bump PORTREVISION of dependent ports for dependency change

szip does not allow redistribution in binary form without proper commercial
license. Its LICENSE_PERMS should be set to no-auto-accept which blocks building
this port, therefore building dependent ports are also blocked. Switch all
dependent ports to science/libaec to avoid conflicts and license issue.

PR:		228743, 246097, 250165

science/hdf: add back the previously removed powerpc workaround

Remove # $FreeBSD$ from Makefiles.

Add workaround for Fortran frontend to GCC 10.

While here, pet portlint.

PR:		246700

science/hdf: update to 4.2.15 to fix build on powerpc64

Newest version builds on powerpc64 just fine.

MFH:		2020Q3 (fix build blanket)

Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330

Related to revision 499061 bump ports with USES=fortran to have them
benefit from the improved situation where libgcc_s is only used when
absolutely necessary.

Suggested by:	tijl

Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590

Bump PORTREVISION for ports depending on the canonical version of GCC
in the ports tree (via Mk/bsd.default-versions.mk and lang/gcc) which
has now moved from GCC 6 to GCC 7 by default.

This includes ports
 - featuring USE_GCC=yes or USE_GCC=any,
 - featuring USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and those
 - with USES=compiler specifying one of openmp, nestedfct, c11, c++0x,
   c++11-lib, c++11-lang, c++14-lang, c++17-lang, or gcc-c++11-lib.

PR:		222542

- Switch to new test framework

Approved by:	portmgr blanket

Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079).

Also not for armv7.  Missed in previous sweep.

Bump PORTREVISION for ports depending on the canonical version of GCC
(via Mk/bsd.default-versions.mk and lang/gcc) which has moved from
GCC 5.4 to GCC 6.4 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++11-lang,
   c++14-lang, c++0x, c11, or gcc-c++11-lib.

PR:		219275

Mark some ports failing on aarch64, and, in a few cases, other tier-2
archs.

While here, pet portlint.

Approved by:	portmgr (tier-2 blanket)

Bump PORTREVISIONs for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.9.4 to GCC 5.4 (at least under some
circumstances such as versions of FreeBSD or platforms).

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using using Mk/bsd.octave.mk which in turn has USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++14-lang,
   c++11-lang, c++0x, c11, or gcc-c++11-lib.

PR:		216707

Bump PORTREVISIONS for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.8.5 to GCC 4.9.4 (at least under some
circumstances such as versions of FreeBSD or platforms), part II.

The first part covered  ports with USE_GCC=yes, USE_GCC=any, or one of
gcc-c++11-lib, openmp, nestedfct, c++11-lib as well as c++14-lang,
c++11-lang, c++0x, c11 requested via USES=compiler.

This adds ports with USES=fortran and ports using Mk/bsd.octave.mk
which in turn has USES=fortran.

PR:		214965
Reported by:	thierry

many ports: mark broken on powerpc64

Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u.

With hat:	portmgr
Sponsored by:	Absolight

Reformat port description text and split it into three paragraphs to improve
readability.  Previously the right margin was touching a terminal border for
standard 80-character width (fmt -w 80) while better appeal is achieved with
72-76 values.  Also, separate sentences with double space as it looks better
when using fixed-width (monospace) fonts and is how we typically format text
in FreeBSD.

- Unbreak the build on PowerPC by pretending to be pre-Intel Apple CPU;
  while this is probably not right design-wise, it allows for a smaller
  fix in line count (all regression tests do pass)
- While here, perform usual Makefile maintenance and cleanups: sort the
  knobs, wrap overly long lines, and improve `regression-test' target

Convert to USES=jpeg

- Use CONFLICTS_INSTALL instead of CONFLICTS
- Add OPTIONS_DEFINE
- Pet portlint

- Update to 4.2.11
- Update pkg-descr

Changes:	http://www.hdfgroup.org/ftp/HDF/releases/HDF4.2.11/src/hdf-4.2.11-RELEASE.txt
		http://www.hdfgroup.org/ftp/HDF/releases/HDF4.2.10/src/hdf-4.2.10-RELEASE.txt
		http://www.hdfgroup.org/ftp/HDF/releases/HDF4.2.9/src/hdf-4.2.9-RELEASE.txt

Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)

- USES=libtool tar:bzip2
- Add INSTALL_TARGET=install-strip
- Use MAKE_CMD

Convert all :U to :tu and :L to :tl

Since FreeBSD 8.4 and FreeBSD 9.1 make(1) do support :tu and :tl as a
replacement for :U and :L (which has been marked as deprecated)

bmake which is the default on FreeBSD 10+ only support by default
:tu/:tl a hack has been added at the time to support :U and :L to ease
migration. This hack is now not necessary anymore

Note that this makes the ports tree incompatible with make(1) from
FreeBSD 8.3 or earlier

With hat:	portmgr

Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)

New LIB_DEPENDS syntax, USES=fortran, staging.

Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui

Add NO_STAGE all over the place in preparation for the staging support (cat:
science)

- Remove MAKE_JOBS_SAFE variable

Approved by:	portmgr (bdrewery)

- Update to 4.2.8.
- Add MAKE_JOBS_SAFE.
- Trim header.

PR:		ports/172052
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>

Mark as broken on powerpc.

Hat:		portmgr

Add the three overlooked headers to the pkg-plist.

Notified by:    pav@

Upgrade from 4.2r3 to 4.2.7 (this neccessitated EPOCH bump).
Unbreak, untangle. Stop fetching/installing documents (other
than man-pages) -- these are available online.

Using standard libtool instead of the bundled one fails -- an
autotools expert should take a closer look.

Mark as deprecated and set expiration to 2012-05-10 for ports that are mark as
broken for more than 6 month

 - remove MD5

Mark broken some ports with unfetchable distfiles

update www

- update to jpeg-8

Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
implies lang/gcc44 up from lang/gcc43.

Approved by:    portmgr

make fetchable.

- Mark MAKE_JOBS_UNSAFE, fails with force make jobs

- update to jpeg7
Tested by:      pav on pointyhat

- Fix shlib symlink

Reported by:    pointyhat

- Fix plist

Reported by:    pointyhat

Bump port revision by the former commit.

Support shared lib by tewaking.

Suggested by: pav@

Update to 42r3 and unbreak for 7.
Drop maintainership to ports@.

Remove CONFIGURE_ENV

Submitted by:   gerald@

Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3.

Mark as broken on gcc 4.2.

Now we use USE_FORTRAN=yes to use FORTRAN compiler.

Fix build and finally migrated to gfortran42!

Spotted by:     linimon

Marked as BROKEN [1], and make fetchable [2].

Submitted by:   kris [1], fenner [2].

* Use gfortran
* portlint.
Build was not verified. It has been known that it doesn't build
with 6.2-RELEASE(?), even without modification, but pointyhat
build cluster. Hope pointyhat builds without errors.

Take over.

. Drop maintainership of these ports.  Its glaringly obvious that I don't
  have time to maintain them since I'm not even keeping up with the ports
  that are most important to me.

. Update website.

Remove USE_REINPLACE from all categories starting with S

Conversion to a single libtool environment.

Approved by:    portmgr (kris)

. Add SHA256.

Now builds on amd64

. Simplify how DISTFILES is constructed, which also makes portlint happy
  since it now appears in the correct order.

. Add an explicit -lm when linking hdiff, required by gcc 3.4.  This should
  fix the build on 5.x.

Reported by:    mich, lofi

. Install documentation.

. Add Szip support.

. Update to 4.2r1.
. Convert to using the autoconf build infrastructure that is part of
  the distribution rather than rolling our own build infrastructure.
. Take maintainership. [1]

Approved by:    mi [1] (previous maintainer)

Fixed installation on 5.x and 6.x.

Reported by:    mi
Approved by:    portmgr (krion)

SIZEify (maintainer timeout)

- Add CONFLICTS between math/netcdf and science/hdf, they both install
  same binaries.

PR:             ports/64646, ports/64647
Submitted by:   Kay Lehmann <kay_lehmann@web.de>

BROKEN on !i386 and !alpha: Does not compile

set CATEGORIES equal to science/hdf5, fixing PKGORIGIN