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Port details
py-h5py General-purpose Python interface to the HDF5 library
2.6.0 science on this many watch lists=1 search for ports that depend on this port Find issues related to this port Report an issue related to this port
Maintainer: johannes@perceivon.net search for ports maintained by this maintainer
Port Added: 13 Jul 2009 14:07:48
Also Listed In: python
License: BSD3CLAUSE
The h5py package provides both a high- and low-level interface to the HDF5
library from Python.  The low-level interface is intended to be a complete
wrapping of the HDF5 1.8 API, while the high-level component supports
Python-style object-oriented access to HDF5 files, datasets and groups.

The goal of this package is not to provide yet another scientific data
model. It is an attempt to create as straightforward a binding as possible
to the existing HDF5 API and abstractions, so that Python programs can
easily deal with HDF5 files and exchange data with other HDF5-aware
applications.

WWW: http://h5py.alfven.org
SVNWeb : Homepage : PortsMon

To install the port: cd /usr/ports/science/py-h5py/ && make install clean
To add the package: pkg install py27-h5py

PKGNAME: py27-h5py

distinfo:

SHA256 (h5py-h5py-2.6.0_GH0.tar.gz) = 7fec1d6f19418b3a624bbb90c7baa105952c0bb6cfbb6676f436fac44fc6ccfb
SIZE (h5py-h5py-2.6.0_GH0.tar.gz) = 246443


NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.

Build dependencies:
  1. numeric.py : math/py-numpy
  2. cython : lang/cython
  3. py27-six>0 : devel/py-six
  4. py27-pkgconfig>0 : devel/py-pkgconfig
  5. py27-setuptools27>0 : devel/py-setuptools27
  6. python2.7 : lang/python27
Runtime dependencies:
  1. numeric.py : math/py-numpy
  2. py27-six>0 : devel/py-six
  3. py27-setuptools27>0 : devel/py-setuptools27
  4. python2.7 : lang/python27
Library dependencies:
  1. libhdf5.so : science/hdf5

This port is required by:

for Run * - deleted ports are only shown under the This port is required by section. It was harder to do for the Required section. Perhaps later...
Configuration Options
===> The following configuration options are available for py27-h5py-2.6.0:
     DOCS=on: Build and/or install documentation
     EXAMPLES=on: Build and/or install examples
===> Use 'make config' to modify these settings

USES:
python

Master Sites:
  1. https://codeload.github.com/h5py/h5py/tar.gz/2.6.0?dummy=/

Number of commits found: 27

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
15 Jun 2016 09:04:29
Original commit files touched by this commit  2.6.0
Revision:416918
tz search for other commits by this committer
Change MAINTAINER from xmj@FreeBSD.org to johannes@perceivon.net

PR:           210265
Submitted by: Johannes Jost Meixner (johannes@perceivon.net)
Approved by:  pi (mentor)
25 May 2016 16:54:31
Original commit files touched by this commit  2.6.0
Revision:415848
pi search for other commits by this committer
Several ports: Change MAINTAINER from xmj@chaot.net to xmj@FreeBSD.org

PR:		209746
Submitted by:	xmj
25 May 2016 16:32:24
Original commit files touched by this commit  2.6.0
Revision:415847
pi search for other commits by this committer
science/py-h5py: 2.5.0 -> 2.6.0

PR:		209630
Submitted by:	Johannes Jost Meixner <xmj@chaot.net> (maintainer)
20 Apr 2016 20:42:40
Original commit files touched by this commit  2.5.0_1
Revision:413700
sunpoet search for other commits by this committer
- Update to 1.10.0
- Add LICENSE_FILE
- Remove outdated PORTSCOUT
- Re-enable SZIP option by default: it was changed unintentionally in r398300

Changes:	https://www.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.0/src/hdf5-1.10.0-RELEASE.txt
		https://www.hdfgroup.org/HDF5/doc/ADGuide/Changes.html
01 Apr 2016 14:25:18
Original commit files touched by this commit  2.5.0
Revision:412349
mat search for other commits by this committer
Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u.

With hat:	portmgr
Sponsored by:	Absolight
11 Dec 2015 20:19:10
Original commit files touched by this commit  2.5.0
Revision:403555
miwi search for other commits by this committer
- Update to 2.5.0
- Switch to options helper
- Switch to do-test

PR:		205137
Submitted by:	maintainer
Approved by:	mat (mentor)
Differential Revision:	D4507
24 May 2015 08:10:29
Original commit files touched by this commit  2.4.0_2
Revision:387255
sunpoet search for other commits by this committer
- Update to 1.8.15
- Bump PORTREVISION for science/hdf5 shlib change

Changes:	http://www.hdfgroup.org/ftp/HDF5/current/src/hdf5-1.8.15-RELEASE.txt
		http://www.hdfgroup.org/HDF5/doc/ADGuide/Changes.html
07 May 2015 17:41:24
Original commit files touched by this commit  2.4.0_1
Revision:385645
mat search for other commits by this committer
Update ports in the s* categores to not use GH_COMMIT.

With minor cleanups to make things simpler.

With hat:	portmgr
Sponsored by:	Absolight
18 Jan 2015 10:39:51
Original commit files touched by this commit  2.4.0_1
Revision:377318
sunpoet search for other commits by this committer
- Update to 1.8.14
- Update MASTER_SITES
- Use INSTALL_TARGET=install-strip instead of
MAKE_ENV=INSTALL_STRIP_FLAG=${STRIP}
- Bump PORTREVISION for science/hdf5 shlib change

Changes:	http://www.hdfgroup.org/ftp/HDF5/current/src/hdf5-1.8.14-RELEASE.txt
		http://www.hdfgroup.org/HDF5/doc/ADGuide/Changes.html
13 Jan 2015 11:23:26
Original commit files touched by this commit  2.4.0
Revision:376913
xmj search for other commits by this committer
science/py-h5py: upgrade to 2.4.0

- upgrade to 2.4.0

Differential Revision:	https://reviews.freebsd.org/D1456
Approved by:	koobs (mentor)
07 Dec 2014 15:17:10
Original commit files touched by this commit  2.3.0_1
Revision:374211
feld search for other commits by this committer
Update "BSD" license in science category
24 Oct 2014 16:50:43
Original commit files touched by this commit  2.3.0_1
Revision:371453
mva search for other commits by this committer
- Convert ports of science/ and security to new USES=python

Approved by:	portmgr (implicit)
10 Sep 2014 20:50:37
Original commit files touched by this commit  2.3.0_1
Revision:367888
gerald search for other commits by this committer
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
09 Jun 2014 05:07:54
Original commit files touched by this commit  2.3.0
Revision:357104
xmj search for other commits by this committer
science/py-h5py: Upgrade to 2.3.0

- Update to 2.3.0
- Remove BROKEN mark

Approved by:	swills (mentor)
06 Jun 2014 20:40:26
Original commit files touched by this commit  2.2.1_2
Revision:356844
antoine search for other commits by this committer
Mark BROKEN: Does not build

cc -DNDEBUG -O2 -pipe -fno-strict-aliasing -fPIC -DH5_USE_16_API
-I/usr/local/lib/python2.7/site-packages/numpy/core/include
-I/wrkdirs/usr/ports/science/py-h5py/work/h5py-2.2.1/lzf -I/usr/local/include
-I/usr/local/include/python2.7 -c h5py/h5fd.c -o
build/temp.freebsd-10.0-RELEASE-p3-amd64-2.7/h5py/h5fd.o
In file included from h5py/h5fd.c:259:
In file included from h5py/api_compat.h:21:
In file included from
/usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4:
In file included from
/usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17:
In file included from
/usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761:
/usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2:
warning: "Using deprecated NumPy API, disable it by "          "#defining
NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings]
#warning "Using deprecated NumPy API, disable it by " \
 ^
h5py/h5fd.c:857:39: error: use of undeclared identifier 'H5FD_MPIPOSIX'
  __pyx_t_1 = __Pyx_PyInt_to_py_hid_t(H5FD_MPIPOSIX); if (unlikely(!__pyx_t_1))
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 34; __pyx_clineno = __LINE__; goto
__pyx_L1_error;}
                                      ^
1 warning and 1 error generated.
error: command 'cc' failed with exit status 1
*** Error code 1

Reported by:	pkg-fallout
03 May 2014 00:55:30
Original commit files touched by this commit  2.2.1_2
Revision:352854
sunpoet search for other commits by this committer
- Update to 1.8.12 (from science/hdf5-18)
- Add LICENSE
- Convert to new LIB_DEPENDS format
- Convert to new options helper
- Use NOT_FOR_ARCHS
- Strip shared library
- Remove deprecated PTHREAD_*
- Use MAKE_CMD
- Bump PORTREVISION for science/hdf5 shlib change [1]

Changes:	http://www.hdfgroup.org/ftp/HDF5/current/src/hdf5-1.8.12-RELEASE.txt
		http://www.hdfgroup.org/HDF5/doc/ADGuide/Changes.html
Approved by:	portmgr (bapt) [1]
10 Mar 2014 20:55:22
Original commit files touched by this commit  2.2.1_1
Revision:347809
gerald search for other commits by this committer
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
13 Dec 2013 19:59:42
Original commit files touched by this commit  2.2.1
Revision:336372
wg search for other commits by this committer
science/py-h5py: update to 2.2.1

- Update to 2.2.1
- Add EXAMPLES

PR:		ports/184746
Submitted by:	maintainer
13 Nov 2013 21:28:30
Original commit files touched by this commit  2.2.0
Revision:333728
wg search for other commits by this committer
science/py-h5py: update to 2.2.0

- Update to 2.2.0
- Add LICENSE (BSD)
- Add DOCS
- Pass maintainership to submitter

PR:		ports/183519
Submitted by:	Johannes Jost Meixner <xmj chaot.net>
Approved by:	maintainer (timeout, 2 weeks, 3 times)
30 Oct 2013 21:34:17
Original commit files touched by this commit  2.1.1
Revision:332177
nemysis search for other commits by this committer
- Update to 2.1.1
- Remove leading article from COMMENT
- Use default dependency for science/hdf5-18
- Add patch

PR:		ports/181483
Submitted by:	Johannes Meixner <xmj@chaot.net>
Approved by:	wg (mentor)
26 Oct 2013 00:52:36
Original commit files touched by this commit  1.2.1_3
Revision:331644
gerald search for other commits by this committer
Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
(Only the first 15 lines of the commit message are shown above View all of this commit message)
20 Sep 2013 22:48:31
Original commit files touched by this commit  1.2.1_2
Revision:327767
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
science)
13 Aug 2013 11:59:54
Original commit files touched by this commit  1.2.1_2
Revision:324659
koobs search for other commits by this committer
science/py-h5py: Add OPTION support for HDF5 1.8

- Add OPTION to use science/hdf5-18 instead of science/hdf5

PR:		ports/179572
Submitted by:	Johannes Meixner <xmj@chaot.net>
Approved by:	maintainer timeout (8 weeks)
03 Jul 2011 13:22:25
Original commit files touched by this commit  1.2.1_1
ohauer search for other commits by this committer
 - remove MD5
01 Feb 2010 11:27:59
Original commit files touched by this commit  1.2.1_1
lwhsu search for other commits by this committer
- Add py-numpy into RUN_DEPENDS

PR:             ports/143419
Submitted by:   TAOKA Fumiyoshi <fmysh AT iijmio-mail.jp> (maintainer)
24 Sep 2009 12:49:40
Original commit files touched by this commit  1.2.1
wen search for other commits by this committer
- Update to 1.2.1

PR:             ports/138984
Submitted by:   wenheping@gmail.com(myself)
Approved by:    maintainer,     jadawin(co-mentor)
Feature safe:   yes
13 Jul 2009 14:07:16
Original commit files touched by this commit  1.2.0
lwhsu search for other commits by this committer
Add py-h5py 1.2.0, a general-purpose Python interface to the HDF5
library.

PR:             ports/136096
Submitted by:   TAOKA Fumiyoshi

Number of commits found: 27

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