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Port details
py-hcluster 0.2.0_7 science on this many watch lists=0 search for ports that depend on this port
Hierarchical Clustering Package For Scipy
Maintained by: wenheping@gmail.com search for ports maintained by this maintainer
Port Added: 26 Sep 2008 23:25:08
Also Listed In: python
License: not specified in port


py-hcluster library provides Python functions for
agglomerative clustering. Its features include
* generating hierarchical clusters from distance matrices
* computing distance matrices from observation vectors
* computing statistics on clusters
* cutting linkages to generate flat clusters
* and visualizing clusters with dendrograms.

The interface is very similar to MATLAB's Statistics
Toolbox API to make code easier to port from MATLAB to
Python/Numpy. The core implementation of this library
is in C for efficiency. 

WWW:	http://code.google.com/p/scipy-cluster/
SVNWeb : Main Web Site : Distfiles Availability : PortsMon

NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.

Required To Build:
  1. math/py-numpy
  2. math/py-matplotlib
  3. devel/py-setuptools27
  4. lang/python27
Required To Run:
  1. math/py-numpy
  2. math/py-matplotlib
  3. devel/py-setuptools27
  4. lang/python27
There are no ports dependent upon this port

To install the port: cd /usr/ports/science/py-hcluster/ && make install clean
To add the package: pkg install science/py-hcluster


Configuration Options
     No options to configure

Master Sites:
  1. http://distcache.FreeBSD.org/ports-distfiles/
  2. http://pypi.crate.io/packages/source/h/hcluster/
  3. http://pypi.python.jp/hcluster/
  4. http://pypi.python.org/packages/source/h/hcluster/

Number of commits found: 13

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
10 Sep 2014 20:50:37
Original commit files touched by this commit  0.2.0_7
Revision:367888
gerald search for other commits by this committer
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
26 Jun 2014 14:27:46
Original commit files touched by this commit  0.2.0_6
Revision:359362
wg search for other commits by this committer
science/py-hcluster: support stage

- Remove leading article from COMMENT
- Use auto plist

Approved by:	portmgt (stage blanket)
10 Mar 2014 20:55:22
Original commit files touched by this commit  0.2.0_6
Revision:347809
gerald search for other commits by this committer
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
26 Oct 2013 00:52:36
Original commit files touched by this commit  0.2.0_5
Revision:331644
gerald search for other commits by this committer
Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
(Only the first 15 lines of the commit message are shown above View all of this commit message)
20 Sep 2013 22:48:31
Original commit files touched by this commit  0.2.0_4
Revision:327767
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
science)
01 Jun 2012 05:26:28
Original commit files touched by this commit  0.2.0_4
dinoex search for other commits by this committer
- update png to 1.5.10
21 Jan 2012 17:40:15
Original commit files touched by this commit  0.2.0_3
eadler search for other commits by this committer
At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450
ports use BUILD_DEPENDS:= ${RUN_DEPENDS}. This patch fixes ports that are
currently broken. This is a temporary measure until we organically stop using
:= or someone(s) spend a lot of time changing all the ports over.

Explicit duplication > := > = and this just moves ports one step to the left

Approved by:    portmgr
03 Jul 2011 13:22:25
Original commit files touched by this commit  0.2.0_3
ohauer search for other commits by this committer
 - remove MD5
28 Mar 2010 06:47:48
Original commit files touched by this commit  0.2.0_3
dinoex search for other commits by this committer
- update to 1.4.1
Reviewed by:    exp8 run on pointyhat
Supported by:   miwi
05 Feb 2010 11:46:55
Original commit files touched by this commit  0.2.0_2
dinoex search for other commits by this committer
- update to jpeg-8
31 Jul 2009 13:57:52
Original commit files touched by this commit  0.2.0_1
dinoex search for other commits by this committer
- bump all port that indirectly depends on libjpeg and have not yet been bumped
or updated
Requested by:   edwin
22 Dec 2008 21:10:33
Original commit files touched by this commit  0.2.0
miwi search for other commits by this committer
- Update to 0.2.0

PR:             129652
Submitted by:   Wen Heping <wenheping@gmail.com> (maintainer)
26 Sep 2008 23:21:54
Original commit files touched by this commit  0.1.9
miwi search for other commits by this committer
py-hcluster library provides Python functions for
agglomerative clustering. Its features include
* generating hierarchical clusters from distance matrices
* computing distance matrices from observation vectors
* computing statistics on clusters
* cutting linkages to generate flat clusters
* and visualizing clusters with dendrograms.

The interface is very similar to MATLAB's Statistics
Toolbox API to make code easier to port from MATLAB to
Python/Numpy. The core implementation of this library
is in C for efficiency.

WWW:    http://code.google.com/p/scipy-cluster/

PR:             ports/127515
Submitted by:   Wen Heping <wenheping at gmail.com>

Number of commits found: 13

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