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Port details
R-cran-Biobase Base functions for Bioconductor
2.66.0 biology Σ=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 2.66.0Version of this port present on the latest quarterly branch.
Maintainer: wen@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2023-12-15 12:57:12
Last Update: 2025-04-11 14:28:35
Commit Hash: 6062197
License: ART20
WWW:
https://bioconductor.org/packages/Biobase
Description: #
Functions that are needed by many other packages or which replace R functions.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages: #
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist #
Expand this list (3 items)
Collapse this list.
  1. /usr/local/share/licenses/R-cran-Biobase-2.66.0/catalog.mk
  2. /usr/local/share/licenses/R-cran-Biobase-2.66.0/LICENSE
  3. /usr/local/share/licenses/R-cran-Biobase-2.66.0/ART20
Collapse this list.
USE_RC_SUBR (Service Scripts)
  • no SUBR information found for this port
Dependency lines:
  • R-cran-Biobase>0:biology/R-cran-Biobase
To install the port: #
cd /usr/ports/biology/R-cran-Biobase/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/R-cran-Biobase
  • pkg install R-cran-Biobase
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: R-cran-Biobase
Flavors: there is no flavor information for this port. #
distinfo: #
TIMESTAMP = 1744380398 SHA256 (Biobase_2.66.0.tar.gz) = 330cde8cac09e362d689725a547a0c35218a16dd31a8f9d2e0baf54b08ddb3d9 SIZE (Biobase_2.66.0.tar.gz) = 1978998

Packages (timestamps in pop-ups are UTC): #
R-cran-Biobase
ABIaarch64amd64armv6armv7i386
FreeBSD:14:latest2.66.02.66.0-2.66.02.66.0
FreeBSD:14:quarterly2.66.02.66.0-2.66.02.66.0
FreeBSD:15:latest2.66.02.66.0n/a2.66.0n/a
FreeBSD:15:quarterly2.66.02.66.0n/a-n/a
FreeBSD:16:latest2.66.02.66.0n/a-n/a
Dependencies #
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies: #
  1. R-cran-BiocGenerics>=0.27.1 : biology/R-cran-BiocGenerics
  2. R : math/R
  3. gfortran13 : lang/gcc13
  4. as : devel/binutils
Runtime dependencies: #
  1. R-cran-BiocGenerics>=0.27.1 : biology/R-cran-BiocGenerics
  2. R : math/R
  3. gfortran13 : lang/gcc13
This port is required by: #
for Build #
  1. math/R-cran-NMF
for Run #
  1. math/R-cran-NMF

Configuration Options: #
No options to configure
Options name: #
biology_R-cran-Biobase
USES: #
cran:auto-plist,compiles
FreshPorts was unable to extract/find any pkg message #
Master Sites: #
Expand this list (1 items)
Collapse this list.
  1. https://www.bioconductor.org/packages/release/bioc/src/contrib/
Collapse this list.

Number of commits found: 2 #

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
2.66.0
11 Apr 2025 14:28:35
commit hash: 6062197438745c2d225585128b821d3639b5392acommit hash: 6062197438745c2d225585128b821d3639b5392acommit hash: 6062197438745c2d225585128b821d3639b5392acommit hash: 6062197438745c2d225585128b821d3639b5392a files touched by this commit
Wen Heping (wen) search for other commits by this committer
biology/R-cran-Biobase: Update to 2.66.0

Take maintainership

PR:		285994
Reported by:	wen@
Approved by:	maintainer
2.62.0
15 Dec 2023 12:55:44
commit hash: 82e85eb5bf499342674cc1fb30366cf0134d21aacommit hash: 82e85eb5bf499342674cc1fb30366cf0134d21aacommit hash: 82e85eb5bf499342674cc1fb30366cf0134d21aacommit hash: 82e85eb5bf499342674cc1fb30366cf0134d21aa files touched by this commit
Muhammad Moinur Rahman (bofh) search for other commits by this committer
biology/R-cran-Biobase: New port

Functions that are needed by many other packages or which replace R
functions.

WWW: https://bioconductor.org/packages/Biobase

Number of commits found: 2