| Port details |
- act A DNA sequence comparison viewer based on Artemis
- 2.0_1 biology
 =0      2.0_1Version of this port present on the latest quarterly branch. - Maintainer: chuynh@biolateral.com.au
- Port Added: 2003-01-16 14:23:24
- Last Update: 2005-03-12 08:07:23
- SVN Revision: UNKNOWN
- License: not specified in port
- WWW:
- http://www.sanger.ac.uk/Software/ACT/manual
- Description:
- ACT (Artemis Comparison Tool) is a DNA sequence comparison viewer based on
Artemis. In common with Artemis, ACT is written in Java and runs on UNIX,
GNU/Linux, Macintosh and MS Windows systems. It can read complete EMBL
and GENBANK entries or sequence in FASTA or raw format. Extra sequence
features can be in EMBL, GENBANK or GFF format. ACT is distributed under the
same license as Artemis.
The sequence comparison displayed by ACT is usually the result of a blastn or
tblastx search that has been processed by MSPcrunch. MSPcrunch must be run
with the -d flag for the output to be usable by ACT.
WWW: http://www.sanger.ac.uk/Software/ACT/manual
 cgit ¦ GitHub ¦ GitHub ¦ GitLab ¦ 
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- No installation instructions:
- This port has been deleted.
- PKGNAME: act
- Flavors: there is no flavor information for this port.
- distinfo:
- There is no distinfo for this port.
No package information for this port in our database- Sometimes this happens. Not all ports have packages. Perhaps there is a build error. Check the fallout link:
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Runtime dependencies:
-
- java : java/jdk13
- There are no ports dependent upon this port
Configuration Options:- No options to configure
- Options name:
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- Master Sites:
|
Number of commits found: 6
| Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
| Commit | Credits | Log message |
|---|
2.0_1
12 Mar 2005 08:07:23
  |
sem |
- biology/act is redundant after biology/artemis update
PR: ports/76217
Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar>
Approved by: maintainer timeout (2 monthes) |
2.0_1
31 Mar 2004 03:12:58
|
trevor |
SIZEify (maintainer timeout) |
2.0_1
04 Feb 2004 05:21:48
|
marcus |
Bump PORTREVISION on all ports that depend on gettext to aid with upgrading.
(Part 2) |
2.0
23 Jun 2003 13:37:39
|
daichi |
update ports/biology/act to latest release (v2)
PR: 49093
Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> |
1.0
21 Feb 2003 11:01:38
|
knu |
De-pkg-comment. |
1.0
16 Jan 2003 14:22:59
|
edwin |
New Port: biology/act
PR: ports/35753
Submitted by: Camson Huynh <chuynh@biolateral.com.au> |
Number of commits found: 6
|
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