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Port details
artemis DNA sequence viewer and annotation tool
9_2 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port

There is no maintainer for this port.
Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org search for ports maintained by this maintainer
Port Added: 22 Dec 2001 11:39:40
Also Listed In: java
License: not specified in port
Artemis is a DNA sequence viewer and annotation tool that allows
visualisation of sequence features and the results of analyses within
the context of the sequence, and its six-frame translation.  Artemis is
written in Java, reads EMBL or GENBANK format sequences and feature
tables, and can work on sequences of any size.

ACT (Artemis Comparison Tool) is a DNA sequence comparison viewer based
on Artemis. It can open two or more sequences (and their
annotations/features) together with their comparisons (usually the
result of running blastn or tblastx searches).

WWW: http://www.sanger.ac.uk/Software/Artemis/manual
WWW: http://www.sanger.ac.uk/Software/ACT/manual
SVNWeb : Homepage : PortsMon
    Pseudo-pkg-plist information, but much better, from make generate-plist
    Expand this list (1781 items)
  1. artemis-9/README
  2. artemis-9/act
  3. artemis-9/art
  4. artemis-9/artemis_sqlmap/Analysis.xml
  5. artemis-9/artemis_sqlmap/AnalysisFeature.xml
  6. artemis-9/artemis_sqlmap/CvTerm.xml
  7. artemis-9/artemis_sqlmap/Db.xml
  8. artemis-9/artemis_sqlmap/DbXRef.xml
  9. artemis-9/artemis_sqlmap/Feature.xml
  10. artemis-9/artemis_sqlmap/FeatureCvTerm.xml
  11. artemis-9/artemis_sqlmap/FeatureCvTermDbXRef.xml
  12. artemis-9/artemis_sqlmap/FeatureCvTermProp.xml
  13. artemis-9/artemis_sqlmap/FeatureCvTermPub.xml
  14. artemis-9/artemis_sqlmap/FeatureDbXRef.xml
  15. artemis-9/artemis_sqlmap/FeatureLoc.xml
  16. artemis-9/artemis_sqlmap/FeatureProp.xml
  17. artemis-9/artemis_sqlmap/FeatureRelationship.xml
  18. artemis-9/artemis_sqlmap/Organism.xml
  19. artemis-9/artemis_sqlmap/Pub.xml
  20. artemis-9/artemis_sqlmap/Synonym.xml
  21. artemis-9/artemis_sqlmap/chado_iBatis_config.properties
  22. artemis-9/artemis_sqlmap/chado_iBatis_config.xml
  23. artemis-9/etc/af063097.embl
  24. artemis-9/etc/af063097.fasta
  25. artemis-9/etc/af063097_v_b132222.crunch
  26. artemis-9/etc/b132222.embl
  27. artemis-9/etc/b132222.fasta
  28. artemis-9/etc/c1215.blastn.crunch
  29. artemis-9/etc/c1215.blastn.tab
  30. artemis-9/etc/c1215.embl
  31. artemis-9/etc/c1215.genbank
  32. artemis-9/etc/c1215.seq
  33. artemis-9/etc/feature_keys
  34. artemis-9/etc/feature_keys_gff
  35. artemis-9/etc/go_associations.pl
  36. artemis-9/etc/log4j.properties
  37. artemis-9/etc/options
  38. artemis-9/etc/pombe.usage
  39. artemis-9/etc/qualifier_types
  40. artemis-9/etc/qualifier_types_gff
  41. artemis-9/etc/results_to_netscape
  42. artemis-9/etc/run_blastn
  43. artemis-9/etc/run_blastn.sanger
  44. artemis-9/etc/run_blastp
  45. artemis-9/etc/run_blastp.sanger
  46. artemis-9/etc/run_blastx
  47. artemis-9/etc/run_blastx.sanger
  48. artemis-9/etc/run_clustalx
  49. artemis-9/etc/run_clustalx.sanger
  50. artemis-9/etc/run_fasta
  51. artemis-9/etc/run_fasta.sanger
  52. artemis-9/etc/run_fastx
  53. artemis-9/etc/run_fastx.sanger
  54. artemis-9/etc/run_hth
  55. artemis-9/etc/run_jalview
  56. artemis-9/etc/run_pepstats
  57. artemis-9/etc/run_sigcleave
  58. artemis-9/etc/run_smart
  59. artemis-9/etc/run_tblastn
  60. artemis-9/etc/run_tblastx
  61. artemis-9/images/helix.gif
  62. artemis-9/images/icon.gif
  63. artemis-9/images/sanger-centre.gif
  64. artemis-9/lib/LICENSE.Apache
  65. artemis-9/lib/LICENSE.JDBC
  66. artemis-9/lib/README
  67. artemis-9/lib/biojava.jar
  68. artemis-9/lib/chado-14-interface.jar
  69. artemis-9/lib/ibatis/README
  70. artemis-9/lib/ibatis/cglib-nodep-2.2_beta1.jar
  71. artemis-9/lib/ibatis/ibatis-2.3.0.677.jar
  72. artemis-9/lib/ibatis/license.txt
  73. artemis-9/lib/ibatis/log4j-1.2.14.jar
  74. artemis-9/lib/j2ssh/COMMONS.LICENSE
  75. artemis-9/lib/j2ssh/J2SSH.LICENSE
  76. artemis-9/lib/j2ssh/README
  77. artemis-9/lib/j2ssh/commons-logging.jar
  78. artemis-9/lib/j2ssh/j2ssh-artemis-plugin.jar
  79. artemis-9/lib/j2ssh/j2ssh-core.jar
  80. artemis-9/lib/j2ssh/j2ssh.properties
  81. artemis-9/lib/jakarta-regexp-1.2.jar
  82. artemis-9/lib/jemAlign.jar
  83. artemis-9/lib/jobcontrol.jar
  84. artemis-9/lib/macos.jar
  85. artemis-9/lib/postgresql-8.1-407.jdbc2ee.jar
  86. artemis-9/lib/retrotranslator-runtime-1.1.0.jar
  87. artemis-9/nsdb/CommitFailed.class
  88. artemis-9/nsdb/CommitFailed.java
  89. artemis-9/nsdb/CommitFailedHelper.class
  90. artemis-9/nsdb/CommitFailedHelper.java
  91. artemis-9/nsdb/CommitFailedHolder.java
  92. artemis-9/nsdb/Datestamp.class
  93. artemis-9/nsdb/Datestamp.java
  94. artemis-9/nsdb/DatestampHelper.class
  95. artemis-9/nsdb/DatestampHelper.java
  96. artemis-9/nsdb/DatestampHolder.java
  97. artemis-9/nsdb/Embl.class
  98. artemis-9/nsdb/Embl.java
  99. artemis-9/nsdb/EmblHelper.class
  100. artemis-9/nsdb/EmblHelper.java
  101. artemis-9/nsdb/EmblHolder.java
  102. artemis-9/nsdb/EmblOperations.class
  103. artemis-9/nsdb/EmblOperations.java
  104. artemis-9/nsdb/EmblPackage/Superceded.class
  105. artemis-9/nsdb/EmblPackage/Superceded.java
  106. artemis-9/nsdb/EmblPackage/SupercededHelper.class
  107. artemis-9/nsdb/EmblPackage/SupercededHelper.java
  108. artemis-9/nsdb/EmblPackage/SupercededHolder.java
  109. artemis-9/nsdb/EmblSeq.class
  110. artemis-9/nsdb/EmblSeq.java
  111. artemis-9/nsdb/EmblSeqHelper.class
  112. artemis-9/nsdb/EmblSeqHelper.java
  113. artemis-9/nsdb/EmblSeqHolder.java
  114. artemis-9/nsdb/EmblSeqOperations.class
  115. artemis-9/nsdb/EmblSeqOperations.java
  116. artemis-9/nsdb/EmblSeqWriter.class
  117. artemis-9/nsdb/EmblSeqWriter.java
  118. artemis-9/nsdb/EmblSeqWriterHelper.class
  119. artemis-9/nsdb/EmblSeqWriterHelper.java
  120. artemis-9/nsdb/EmblSeqWriterHolder.java
  121. artemis-9/nsdb/EmblSeqWriterOperations.class
  122. artemis-9/nsdb/EmblSeqWriterOperations.java
  123. artemis-9/nsdb/EmblWriter.class
  124. artemis-9/nsdb/EmblWriter.java
  125. artemis-9/nsdb/EmblWriterHelper.class
  126. artemis-9/nsdb/EmblWriterHelper.java
  127. artemis-9/nsdb/EmblWriterHolder.java
  128. artemis-9/nsdb/EmblWriterOperations.class
  129. artemis-9/nsdb/EmblWriterOperations.java
  130. artemis-9/nsdb/EntryInfo.class
  131. artemis-9/nsdb/EntryInfo.java
  132. artemis-9/nsdb/EntryInfoHelper.java
  133. artemis-9/nsdb/EntryInfoHolder.java
  134. artemis-9/nsdb/EntryInfoListHelper.java
  135. artemis-9/nsdb/EntryInfoListHolder.java
  136. artemis-9/nsdb/EntryInfoOperations.class
  137. artemis-9/nsdb/EntryInfoOperations.java
  138. artemis-9/nsdb/EntryStats.class
  139. artemis-9/nsdb/EntryStats.java
  140. artemis-9/nsdb/EntryStatsHelper.class
  141. artemis-9/nsdb/EntryStatsHelper.java
  142. artemis-9/nsdb/EntryStatsHolder.java
  143. artemis-9/nsdb/FeatureLocation.class
  144. artemis-9/nsdb/FeatureLocation.java
  145. artemis-9/nsdb/FeatureLocationHelper.class
  146. artemis-9/nsdb/FeatureLocationHelper.java
  147. artemis-9/nsdb/FeatureLocationHolder.java
  148. artemis-9/nsdb/FeatureLocationListHelper.java
  149. artemis-9/nsdb/FeatureLocationListHolder.java
  150. artemis-9/nsdb/FeatureLocationOperations.class
  151. artemis-9/nsdb/FeatureLocationOperations.java
  152. artemis-9/nsdb/InexactLocation.class
  153. artemis-9/nsdb/InexactLocation.java
  154. artemis-9/nsdb/InexactLocationHelper.class
  155. artemis-9/nsdb/InexactLocationHelper.java
  156. artemis-9/nsdb/InexactLocationHolder.java
  157. artemis-9/nsdb/InvalidKey.class
  158. artemis-9/nsdb/InvalidKey.java
  159. artemis-9/nsdb/InvalidKeyHelper.class
  160. artemis-9/nsdb/InvalidKeyHelper.java
  161. artemis-9/nsdb/InvalidKeyHolder.java
  162. artemis-9/nsdb/InvalidQualifier.class
  163. artemis-9/nsdb/InvalidQualifier.java
  164. artemis-9/nsdb/InvalidQualifierHelper.class
  165. artemis-9/nsdb/InvalidQualifierHelper.java
  166. artemis-9/nsdb/InvalidQualifierHolder.java
  167. artemis-9/nsdb/Location.class
  168. artemis-9/nsdb/Location.java
  169. artemis-9/nsdb/LocationHelper.class
  170. artemis-9/nsdb/LocationHelper.java
  171. artemis-9/nsdb/LocationHolder.java
  172. artemis-9/nsdb/LocationListHelper.java
  173. artemis-9/nsdb/LocationListHolder.java
  174. artemis-9/nsdb/LocationOperations.class
  175. artemis-9/nsdb/LocationOperations.java
  176. artemis-9/nsdb/LocationPackage/IdListHelper.class
  177. artemis-9/nsdb/LocationPackage/IdListHelper.java
  178. artemis-9/nsdb/LocationPackage/IdListHolder.java
  179. artemis-9/nsdb/LocationPackage/LocGapHelper.class
  180. artemis-9/nsdb/LocationPackage/LocGapHelper.java
  181. artemis-9/nsdb/LocationPackage/LocNodeTypeCodeHelper.class
  182. artemis-9/nsdb/LocationPackage/LocNodeTypeCodeHelper.java
  183. artemis-9/nsdb/LocationPackage/LocOperator.class
  184. artemis-9/nsdb/LocationPackage/LocOperator.java
  185. artemis-9/nsdb/LocationPackage/LocOperatorHelper.class
  186. artemis-9/nsdb/LocationPackage/LocOperatorHelper.java
  187. artemis-9/nsdb/LocationPackage/LocOperatorHolder.java
  188. artemis-9/nsdb/LocationPackage/LocPhysicalSegmentHelper.class
  189. artemis-9/nsdb/LocationPackage/LocPhysicalSegmentHelper.java
  190. artemis-9/nsdb/LocationPackage/LocVirtualSegment.class
  191. artemis-9/nsdb/LocationPackage/LocVirtualSegment.java
  192. artemis-9/nsdb/LocationPackage/LocVirtualSegmentHelper.class
  193. artemis-9/nsdb/LocationPackage/LocVirtualSegmentHelper.java
  194. artemis-9/nsdb/LocationPackage/LocVirtualSegmentHolder.java
  195. artemis-9/nsdb/LocationPackage/LocationNodeListHelper.class
  196. artemis-9/nsdb/LocationPackage/LocationNodeListHelper.java
  197. artemis-9/nsdb/LocationPackage/LocationNodeListHolder.java
  198. artemis-9/nsdb/LocationPackage/LocationNode_u.class
  199. artemis-9/nsdb/LocationPackage/LocationNode_u.java
  200. artemis-9/nsdb/LocationPackage/LocationNode_uHelper.class
  201. artemis-9/nsdb/LocationPackage/LocationNode_uHelper.java
  202. artemis-9/nsdb/LocationPackage/LocationNode_uHolder.java
  203. artemis-9/nsdb/LocationParse.class
  204. artemis-9/nsdb/LocationParse.java
  205. artemis-9/nsdb/LocationParseHelper.class
  206. artemis-9/nsdb/LocationParseHelper.java
  207. artemis-9/nsdb/LocationParseHolder.java
  208. artemis-9/nsdb/NucFeature.class
  209. artemis-9/nsdb/NucFeature.java
  210. artemis-9/nsdb/NucFeatureHelper.class
  211. artemis-9/nsdb/NucFeatureHelper.java
  212. artemis-9/nsdb/NucFeatureHolder.java
  213. artemis-9/nsdb/NucFeatureListHelper.class
  214. artemis-9/nsdb/NucFeatureListHelper.java
  215. artemis-9/nsdb/NucFeatureListHolder.java
  216. artemis-9/nsdb/NucFeatureOperations.class
  217. artemis-9/nsdb/NucFeatureOperations.java
  218. artemis-9/nsdb/NucFeaturePackage/Qualifier.class
  219. artemis-9/nsdb/NucFeaturePackage/Qualifier.java
  220. artemis-9/nsdb/NucFeaturePackage/QualifierHelper.class
  221. artemis-9/nsdb/NucFeaturePackage/QualifierHelper.java
  222. artemis-9/nsdb/NucFeaturePackage/QualifierHolder.java
  223. artemis-9/nsdb/NucFeaturePackage/QualifierListHelper.class
  224. artemis-9/nsdb/NucFeaturePackage/QualifierListHelper.java
  225. artemis-9/nsdb/NucFeaturePackage/QualifierListHolder.java
  226. artemis-9/nsdb/NucFeaturePackage/QualifierTypeCodeHelper.class
  227. artemis-9/nsdb/NucFeaturePackage/QualifierTypeCodeHelper.java
  228. artemis-9/nsdb/NucFeaturePackage/QualifierValueListHelper.class
  229. artemis-9/nsdb/NucFeaturePackage/QualifierValueListHelper.java
  230. artemis-9/nsdb/NucFeaturePackage/QualifierValueListHolder.java
  231. artemis-9/nsdb/NucFeaturePackage/QualifierValue_u.class
  232. artemis-9/nsdb/NucFeaturePackage/QualifierValue_u.java
  233. artemis-9/nsdb/NucFeaturePackage/QualifierValue_uHelper.class
  234. artemis-9/nsdb/NucFeaturePackage/QualifierValue_uHelper.java
  235. artemis-9/nsdb/NucFeaturePackage/QualifierValue_uHolder.java
  236. artemis-9/nsdb/NucFeatureWriter.class
  237. artemis-9/nsdb/NucFeatureWriter.java
  238. artemis-9/nsdb/NucFeatureWriterHelper.class
  239. artemis-9/nsdb/NucFeatureWriterHelper.java
  240. artemis-9/nsdb/NucFeatureWriterHolder.java
  241. artemis-9/nsdb/NucFeatureWriterListHelper.java
  242. artemis-9/nsdb/NucFeatureWriterListHolder.java
  243. artemis-9/nsdb/NucFeatureWriterOperations.class
  244. artemis-9/nsdb/NucFeatureWriterOperations.java
  245. artemis-9/nsdb/NucSeq.class
  246. artemis-9/nsdb/NucSeq.java
  247. artemis-9/nsdb/NucSeqHelper.java
  248. artemis-9/nsdb/NucSeqHolder.java
  249. artemis-9/nsdb/NucSeqListHelper.java
  250. artemis-9/nsdb/NucSeqListHolder.java
  251. artemis-9/nsdb/NucSeqOperations.class
  252. artemis-9/nsdb/NucSeqOperations.java
  253. artemis-9/nsdb/OutOfDate.class
  254. artemis-9/nsdb/OutOfDate.java
  255. artemis-9/nsdb/OutOfDateHelper.class
  256. artemis-9/nsdb/OutOfDateHelper.java
  257. artemis-9/nsdb/OutOfDateHolder.java
  258. artemis-9/nsdb/QualifierParse.class
  259. artemis-9/nsdb/QualifierParse.java
  260. artemis-9/nsdb/QualifierParseHelper.class
  261. artemis-9/nsdb/QualifierParseHelper.java
  262. artemis-9/nsdb/QualifierParseHolder.java
  263. artemis-9/nsdb/ReadOnlyException.class
  264. artemis-9/nsdb/ReadOnlyException.java
  265. artemis-9/nsdb/ReadOnlyExceptionHelper.class
  266. artemis-9/nsdb/ReadOnlyExceptionHelper.java
  267. artemis-9/nsdb/ReadOnlyExceptionHolder.java
  268. artemis-9/nsdb/ServerInfo.class
  269. artemis-9/nsdb/ServerInfo.java
  270. artemis-9/nsdb/ServerInfoHelper.class
  271. artemis-9/nsdb/ServerInfoHelper.java
  272. artemis-9/nsdb/ServerInfoHolder.java
  273. artemis-9/nsdb/_EmblSeqStub.class
  274. artemis-9/nsdb/_EmblSeqStub.java
  275. artemis-9/nsdb/_EmblSeqWriterStub.class
  276. artemis-9/nsdb/_EmblSeqWriterStub.java
  277. artemis-9/nsdb/_EmblStub.class
  278. artemis-9/nsdb/_EmblStub.java
  279. artemis-9/nsdb/_EmblWriterStub.class
  280. artemis-9/nsdb/_EmblWriterStub.java
  281. artemis-9/nsdb/_EntryInfoStub.java
  282. artemis-9/nsdb/_FeatureLocationStub.class
  283. artemis-9/nsdb/_FeatureLocationStub.java
  284. artemis-9/nsdb/_LocationStub.class
  285. artemis-9/nsdb/_LocationStub.java
  286. artemis-9/nsdb/_NucFeatureStub.class
  287. artemis-9/nsdb/_NucFeatureStub.java
  288. artemis-9/nsdb/_NucFeatureWriterStub.class
  289. artemis-9/nsdb/_NucFeatureWriterStub.java
  290. artemis-9/nsdb/_NucSeqStub.java
  291. artemis-9/nsdb/datestamp_tHelper.class
  292. artemis-9/nsdb/datestamp_tHelper.java
  293. artemis-9/seqdb/BioSeq.class
  294. artemis-9/seqdb/BioSeq.java
  295. artemis-9/seqdb/BioSeqHelper.java
  296. artemis-9/seqdb/BioSeqHolder.java
  297. artemis-9/seqdb/BioSeqOperations.class
  298. artemis-9/seqdb/BioSeqOperations.java
  299. artemis-9/seqdb/Feature.class
  300. artemis-9/seqdb/Feature.java
  301. artemis-9/seqdb/FeatureHelper.java
  302. artemis-9/seqdb/FeatureHolder.java
  303. artemis-9/seqdb/FeatureOperations.class
  304. artemis-9/seqdb/FeatureOperations.java
  305. artemis-9/seqdb/SeqInfo.class
  306. artemis-9/seqdb/SeqInfo.java
  307. artemis-9/seqdb/SeqInfoHelper.java
  308. artemis-9/seqdb/SeqInfoHolder.java
  309. artemis-9/seqdb/SeqInfoOperations.class
  310. artemis-9/seqdb/SeqInfoOperations.java
  311. artemis-9/seqdb/_BioSeqStub.java
  312. artemis-9/seqdb/_FeatureStub.java
  313. artemis-9/seqdb/_SeqInfoStub.java
  314. artemis-9/type/AminoAcid.class
  315. artemis-9/type/AminoAcid.java
  316. artemis-9/type/AminoAcidHelper.class
  317. artemis-9/type/AminoAcidHelper.java
  318. artemis-9/type/AminoAcidHolder.java
  319. artemis-9/type/AminoAcidListHelper.java
  320. artemis-9/type/AminoAcidListHolder.java
  321. artemis-9/type/AntiCodon.class
  322. artemis-9/type/AntiCodon.java
  323. artemis-9/type/AntiCodonHelper.class
  324. artemis-9/type/AntiCodonHelper.java
  325. artemis-9/type/AntiCodonHolder.java
  326. artemis-9/type/AntiCodonListHelper.java
  327. artemis-9/type/AntiCodonListHolder.java
  328. artemis-9/type/Between_ftc.java
  329. artemis-9/type/CodonTranslation.class
  330. artemis-9/type/CodonTranslation.java
  331. artemis-9/type/CodonTranslationHelper.class
  332. artemis-9/type/CodonTranslationHelper.java
  333. artemis-9/type/CodonTranslationHolder.java
  334. artemis-9/type/CodonTranslationListHelper.java
  335. artemis-9/type/CodonTranslationListHolder.java
  336. artemis-9/type/Date.class
  337. artemis-9/type/Date.java
  338. artemis-9/type/DateHelper.class
  339. artemis-9/type/DateHelper.java
  340. artemis-9/type/DateHolder.java
  341. artemis-9/type/DateListHelper.java
  342. artemis-9/type/DateListHolder.java
  343. artemis-9/type/DbXref.class
  344. artemis-9/type/DbXref.java
  345. artemis-9/type/DbXrefHelper.class
  346. artemis-9/type/DbXrefHelper.java
  347. artemis-9/type/DbXrefHolder.java
  348. artemis-9/type/DbXrefListHelper.class
  349. artemis-9/type/DbXrefListHelper.java
  350. artemis-9/type/DbXrefListHolder.java
  351. artemis-9/type/Exact_ftc.java
  352. artemis-9/type/Fuzzy.class
  353. artemis-9/type/Fuzzy.java
  354. artemis-9/type/FuzzyHelper.class
  355. artemis-9/type/FuzzyHelper.java
  356. artemis-9/type/FuzzyHolder.java
  357. artemis-9/type/FuzzyListHelper.java
  358. artemis-9/type/FuzzyListHolder.java
  359. artemis-9/type/FuzzyTypeCodeHelper.class
  360. artemis-9/type/FuzzyTypeCodeHelper.java
  361. artemis-9/type/Greater_ftc.java
  362. artemis-9/type/In_ftc.java
  363. artemis-9/type/IndexOutOfRange.class
  364. artemis-9/type/IndexOutOfRange.java
  365. artemis-9/type/IndexOutOfRangeHelper.class
  366. artemis-9/type/IndexOutOfRangeHelper.java
  367. artemis-9/type/IndexOutOfRangeHolder.java
  368. artemis-9/type/InvalidArgumentValue.class
  369. artemis-9/type/InvalidArgumentValue.java
  370. artemis-9/type/InvalidArgumentValueHelper.class
  371. artemis-9/type/InvalidArgumentValueHelper.java
  372. artemis-9/type/InvalidArgumentValueHolder.java
  373. artemis-9/type/InvalidRelation.class
  374. artemis-9/type/InvalidRelation.java
  375. artemis-9/type/InvalidRelationHelper.class
  376. artemis-9/type/InvalidRelationHelper.java
  377. artemis-9/type/InvalidRelationHolder.java
  378. artemis-9/type/Less_ftc.java
  379. artemis-9/type/NoResult.class
  380. artemis-9/type/NoResult.java
  381. artemis-9/type/NoResultHelper.class
  382. artemis-9/type/NoResultHelper.java
  383. artemis-9/type/NoResultHolder.java
  384. artemis-9/type/NoWritePermission.java
  385. artemis-9/type/NoWritePermissionHelper.java
  386. artemis-9/type/NoWritePermissionHolder.java
  387. artemis-9/type/ParseError.java
  388. artemis-9/type/ParseErrorHelper.java
  389. artemis-9/type/ParseErrorHolder.java
  390. artemis-9/type/Person.java
  391. artemis-9/type/PersonHelper.java
  392. artemis-9/type/PersonHolder.java
  393. artemis-9/type/PersonListHelper.java
  394. artemis-9/type/PersonListHolder.java
  395. artemis-9/type/RepeatUnit.class
  396. artemis-9/type/RepeatUnit.java
  397. artemis-9/type/RepeatUnitHelper.class
  398. artemis-9/type/RepeatUnitHelper.java
  399. artemis-9/type/RepeatUnitHolder.java
  400. artemis-9/type/RepeatUnitListHelper.java
  401. artemis-9/type/RepeatUnitListHolder.java
  402. artemis-9/type/Revision.class
  403. artemis-9/type/Revision.java
  404. artemis-9/type/RevisionHelper.class
  405. artemis-9/type/RevisionHelper.java
  406. artemis-9/type/RevisionHolder.java
  407. artemis-9/type/RevisionListHelper.class
  408. artemis-9/type/RevisionListHelper.java
  409. artemis-9/type/RevisionListHolder.java
  410. artemis-9/type/SpliceConsensus.class
  411. artemis-9/type/SpliceConsensus.java
  412. artemis-9/type/SpliceConsensusHelper.class
  413. artemis-9/type/SpliceConsensusHelper.java
  414. artemis-9/type/SpliceConsensusHolder.java
  415. artemis-9/type/SpliceConsensusListHelper.java
  416. artemis-9/type/SpliceConsensusListHolder.java
  417. artemis-9/type/TranslationException.class
  418. artemis-9/type/TranslationException.java
  419. artemis-9/type/TranslationExceptionHelper.class
  420. artemis-9/type/TranslationExceptionHelper.java
  421. artemis-9/type/TranslationExceptionHolder.java
  422. artemis-9/type/TranslationExceptionListHelper.java
  423. artemis-9/type/TranslationExceptionListHolder.java
  424. artemis-9/type/longListHelper.java
  425. artemis-9/type/longListHolder.java
  426. artemis-9/type/stringListHelper.class
  427. artemis-9/type/stringListHelper.java
  428. artemis-9/type/stringListHolder.java
  429. artemis-9/type/ulongListHelper.java
  430. artemis-9/type/ulongListHolder.java
  431. artemis-9/uk/ac/sanger/artemis/.project
  432. artemis-9/uk/ac/sanger/artemis/Action.class
  433. artemis-9/uk/ac/sanger/artemis/Action.java
  434. artemis-9/uk/ac/sanger/artemis/ActionController.class
  435. artemis-9/uk/ac/sanger/artemis/ActionController.java
  436. artemis-9/uk/ac/sanger/artemis/ActionVector.class
  437. artemis-9/uk/ac/sanger/artemis/ActionVector.java
  438. artemis-9/uk/ac/sanger/artemis/AlignMatch.class
  439. artemis-9/uk/ac/sanger/artemis/AlignMatch.java
  440. artemis-9/uk/ac/sanger/artemis/AlignMatchVector.class
  441. artemis-9/uk/ac/sanger/artemis/AlignMatchVector.java
  442. artemis-9/uk/ac/sanger/artemis/AlignmentSelectionChangeEvent.class
  443. artemis-9/uk/ac/sanger/artemis/AlignmentSelectionChangeEvent.java
  444. artemis-9/uk/ac/sanger/artemis/AlignmentSelectionChangeListener.class
  445. artemis-9/uk/ac/sanger/artemis/AlignmentSelectionChangeListener.java
  446. artemis-9/uk/ac/sanger/artemis/BlastM8ComparisonData.class
  447. artemis-9/uk/ac/sanger/artemis/BlastM8ComparisonData.java
  448. artemis-9/uk/ac/sanger/artemis/ChangeEvent.class
  449. artemis-9/uk/ac/sanger/artemis/ChangeEvent.java
  450. artemis-9/uk/ac/sanger/artemis/ChangeEventVector.class
  451. artemis-9/uk/ac/sanger/artemis/ChangeEventVector.java
  452. artemis-9/uk/ac/sanger/artemis/ChangeListener.class
  453. artemis-9/uk/ac/sanger/artemis/ChangeListener.java
  454. artemis-9/uk/ac/sanger/artemis/ClipBoard.java
  455. artemis-9/uk/ac/sanger/artemis/ComparisonData.class
  456. artemis-9/uk/ac/sanger/artemis/ComparisonData.java
  457. artemis-9/uk/ac/sanger/artemis/ComparisonDataFactory.class
  458. artemis-9/uk/ac/sanger/artemis/ComparisonDataFactory.java
  459. artemis-9/uk/ac/sanger/artemis/ComparisonDataParseException.class
  460. artemis-9/uk/ac/sanger/artemis/ComparisonDataParseException.java
  461. artemis-9/uk/ac/sanger/artemis/Entry$FeatureEnumerator.class
  462. artemis-9/uk/ac/sanger/artemis/Entry.class
  463. artemis-9/uk/ac/sanger/artemis/Entry.java
  464. artemis-9/uk/ac/sanger/artemis/EntryChangeEvent.class
  465. artemis-9/uk/ac/sanger/artemis/EntryChangeEvent.java
  466. artemis-9/uk/ac/sanger/artemis/EntryChangeListener.class
  467. artemis-9/uk/ac/sanger/artemis/EntryChangeListener.java
  468. artemis-9/uk/ac/sanger/artemis/EntryGroup.class
  469. artemis-9/uk/ac/sanger/artemis/EntryGroup.java
  470. artemis-9/uk/ac/sanger/artemis/EntryGroupChangeEvent.class
  471. artemis-9/uk/ac/sanger/artemis/EntryGroupChangeEvent.java
  472. artemis-9/uk/ac/sanger/artemis/EntryGroupChangeListener.class
  473. artemis-9/uk/ac/sanger/artemis/EntryGroupChangeListener.java
  474. artemis-9/uk/ac/sanger/artemis/EntrySource.class
  475. artemis-9/uk/ac/sanger/artemis/EntrySource.java
  476. artemis-9/uk/ac/sanger/artemis/EntrySourceVector.class
  477. artemis-9/uk/ac/sanger/artemis/EntrySourceVector.java
  478. artemis-9/uk/ac/sanger/artemis/EntryVector.class
  479. artemis-9/uk/ac/sanger/artemis/EntryVector.java
  480. artemis-9/uk/ac/sanger/artemis/ExternalProgram$1.class
  481. artemis-9/uk/ac/sanger/artemis/ExternalProgram.class
  482. artemis-9/uk/ac/sanger/artemis/ExternalProgram.java
  483. artemis-9/uk/ac/sanger/artemis/ExternalProgramEvent.class
  484. artemis-9/uk/ac/sanger/artemis/ExternalProgramEvent.java
  485. artemis-9/uk/ac/sanger/artemis/ExternalProgramException.class
  486. artemis-9/uk/ac/sanger/artemis/ExternalProgramException.java
  487. artemis-9/uk/ac/sanger/artemis/ExternalProgramListener.class
  488. artemis-9/uk/ac/sanger/artemis/ExternalProgramListener.java
  489. artemis-9/uk/ac/sanger/artemis/ExternalProgramMonitor.class
  490. artemis-9/uk/ac/sanger/artemis/ExternalProgramMonitor.java
  491. artemis-9/uk/ac/sanger/artemis/ExternalProgramThread.java
  492. artemis-9/uk/ac/sanger/artemis/ExternalProgramUtils.java
  493. artemis-9/uk/ac/sanger/artemis/ExternalProgramVector.class
  494. artemis-9/uk/ac/sanger/artemis/ExternalProgramVector.java
  495. artemis-9/uk/ac/sanger/artemis/Feature.class
  496. artemis-9/uk/ac/sanger/artemis/Feature.java
  497. artemis-9/uk/ac/sanger/artemis/FeatureChangeEvent.class
  498. artemis-9/uk/ac/sanger/artemis/FeatureChangeEvent.java
  499. artemis-9/uk/ac/sanger/artemis/FeatureChangeListener.class
  500. artemis-9/uk/ac/sanger/artemis/FeatureChangeListener.java
  501. artemis-9/uk/ac/sanger/artemis/FeatureEnumeration.class
  502. artemis-9/uk/ac/sanger/artemis/FeatureEnumeration.java
  503. artemis-9/uk/ac/sanger/artemis/FeatureFromVectorPredicate.class
  504. artemis-9/uk/ac/sanger/artemis/FeatureFromVectorPredicate.java
  505. artemis-9/uk/ac/sanger/artemis/FeatureKeyPredicate.class
  506. artemis-9/uk/ac/sanger/artemis/FeatureKeyPredicate.java
  507. artemis-9/uk/ac/sanger/artemis/FeatureKeyQualifierPredicate.class
  508. artemis-9/uk/ac/sanger/artemis/FeatureKeyQualifierPredicate.java
  509. artemis-9/uk/ac/sanger/artemis/FeaturePatternPredicate.class
  510. artemis-9/uk/ac/sanger/artemis/FeaturePatternPredicate.java
  511. artemis-9/uk/ac/sanger/artemis/FeaturePredicate.class
  512. artemis-9/uk/ac/sanger/artemis/FeaturePredicate.java
  513. artemis-9/uk/ac/sanger/artemis/FeaturePredicateConjunction.class
  514. artemis-9/uk/ac/sanger/artemis/FeaturePredicateConjunction.java
  515. artemis-9/uk/ac/sanger/artemis/FeaturePredicateVector.class
  516. artemis-9/uk/ac/sanger/artemis/FeaturePredicateVector.java
  517. artemis-9/uk/ac/sanger/artemis/FeatureSegment.class
  518. artemis-9/uk/ac/sanger/artemis/FeatureSegment.java
  519. artemis-9/uk/ac/sanger/artemis/FeatureSegmentVector.class
  520. artemis-9/uk/ac/sanger/artemis/FeatureSegmentVector.java
  521. artemis-9/uk/ac/sanger/artemis/FeatureVector.class
  522. artemis-9/uk/ac/sanger/artemis/FeatureVector.java
  523. artemis-9/uk/ac/sanger/artemis/FilteredEntryGroup$1.class
  524. artemis-9/uk/ac/sanger/artemis/FilteredEntryGroup$2.class
  525. artemis-9/uk/ac/sanger/artemis/FilteredEntryGroup$3.class
  526. artemis-9/uk/ac/sanger/artemis/FilteredEntryGroup$FeatureEnumerator.class
  527. artemis-9/uk/ac/sanger/artemis/FilteredEntryGroup.class
  528. artemis-9/uk/ac/sanger/artemis/FilteredEntryGroup.java
  529. artemis-9/uk/ac/sanger/artemis/GotoEvent.class
  530. artemis-9/uk/ac/sanger/artemis/GotoEvent.java
  531. artemis-9/uk/ac/sanger/artemis/GotoEventSource.class
  532. artemis-9/uk/ac/sanger/artemis/GotoEventSource.java
  533. artemis-9/uk/ac/sanger/artemis/GotoListener.class
  534. artemis-9/uk/ac/sanger/artemis/GotoListener.java
  535. artemis-9/uk/ac/sanger/artemis/LastSegmentException.class
  536. artemis-9/uk/ac/sanger/artemis/LastSegmentException.java
  537. artemis-9/uk/ac/sanger/artemis/Logger.class
  538. artemis-9/uk/ac/sanger/artemis/Logger.java
  539. artemis-9/uk/ac/sanger/artemis/MSPcrunchComparisonData.class
  540. artemis-9/uk/ac/sanger/artemis/MSPcrunchComparisonData.java
  541. artemis-9/uk/ac/sanger/artemis/MUMmerComparisonData.java
  542. artemis-9/uk/ac/sanger/artemis/MegaBlastComparisonData.class
  543. artemis-9/uk/ac/sanger/artemis/MegaBlastComparisonData.java
  544. artemis-9/uk/ac/sanger/artemis/OptionChangeEvent.class
  545. artemis-9/uk/ac/sanger/artemis/OptionChangeEvent.java
  546. artemis-9/uk/ac/sanger/artemis/OptionChangeListener.class
  547. artemis-9/uk/ac/sanger/artemis/OptionChangeListener.java
  548. artemis-9/uk/ac/sanger/artemis/Options.class
  549. artemis-9/uk/ac/sanger/artemis/Options.java
  550. artemis-9/uk/ac/sanger/artemis/ProcessMonitor.class
  551. artemis-9/uk/ac/sanger/artemis/ProcessMonitor.java
  552. artemis-9/uk/ac/sanger/artemis/SSAHAComparisonData.class
  553. artemis-9/uk/ac/sanger/artemis/SSAHAComparisonData.java
  554. artemis-9/uk/ac/sanger/artemis/Selectable.class
  555. artemis-9/uk/ac/sanger/artemis/Selectable.java
  556. artemis-9/uk/ac/sanger/artemis/Selection.class
  557. artemis-9/uk/ac/sanger/artemis/Selection.java
  558. artemis-9/uk/ac/sanger/artemis/SelectionChangeEvent.class
  559. artemis-9/uk/ac/sanger/artemis/SelectionChangeEvent.java
  560. artemis-9/uk/ac/sanger/artemis/SelectionChangeListener.class
  561. artemis-9/uk/ac/sanger/artemis/SelectionChangeListener.java
  562. artemis-9/uk/ac/sanger/artemis/SimpleComparisonData.class
  563. artemis-9/uk/ac/sanger/artemis/SimpleComparisonData.java
  564. artemis-9/uk/ac/sanger/artemis/SimpleEntryGroup$FeatureEnumerator.class
  565. artemis-9/uk/ac/sanger/artemis/SimpleEntryGroup.class
  566. artemis-9/uk/ac/sanger/artemis/SimpleEntryGroup.java
  567. artemis-9/uk/ac/sanger/artemis/SimpleExternalProgramMonitor.class
  568. artemis-9/uk/ac/sanger/artemis/SimpleExternalProgramMonitor.java
  569. artemis-9/uk/ac/sanger/artemis/SimpleGotoEventSource.class
  570. artemis-9/uk/ac/sanger/artemis/SimpleGotoEventSource.java
  571. artemis-9/uk/ac/sanger/artemis/TaskMonitor.class
  572. artemis-9/uk/ac/sanger/artemis/TaskMonitor.java
  573. artemis-9/uk/ac/sanger/artemis/chado/ArtemisUtils.class
  574. artemis-9/uk/ac/sanger/artemis/chado/ArtemisUtils.java
  575. artemis-9/uk/ac/sanger/artemis/chado/ChadoDAO.java
  576. artemis-9/uk/ac/sanger/artemis/chado/ChadoDemo.java
  577. artemis-9/uk/ac/sanger/artemis/chado/ChadoTransaction.class
  578. artemis-9/uk/ac/sanger/artemis/chado/ChadoTransaction.java
  579. artemis-9/uk/ac/sanger/artemis/chado/ChadoTransactionManager.class
  580. artemis-9/uk/ac/sanger/artemis/chado/ChadoTransactionManager.java
  581. artemis-9/uk/ac/sanger/artemis/chado/DbSqlConfig.class
  582. artemis-9/uk/ac/sanger/artemis/chado/DbSqlConfig.java
  583. artemis-9/uk/ac/sanger/artemis/chado/FeatureForUpdatingResidues.class
  584. artemis-9/uk/ac/sanger/artemis/chado/FeatureForUpdatingResidues.java
  585. artemis-9/uk/ac/sanger/artemis/chado/GmodDAO.class
  586. artemis-9/uk/ac/sanger/artemis/chado/GmodDAO.java
  587. artemis-9/uk/ac/sanger/artemis/chado/IBatisDAO.class
  588. artemis-9/uk/ac/sanger/artemis/chado/IBatisDAO.java
  589. artemis-9/uk/ac/sanger/artemis/chado/JdbcDAO.class
  590. artemis-9/uk/ac/sanger/artemis/chado/JdbcDAO.java
  591. artemis-9/uk/ac/sanger/artemis/chado/Similarity$FeaturePropComparator.class
  592. artemis-9/uk/ac/sanger/artemis/chado/Similarity.class
  593. artemis-9/uk/ac/sanger/artemis/chado/Similarity.java
  594. artemis-9/uk/ac/sanger/artemis/chado/SqlMapClientWrapper.class
  595. artemis-9/uk/ac/sanger/artemis/chado/SqlMapClientWrapper.java
  596. artemis-9/uk/ac/sanger/artemis/components/ActMain$1.class
  597. artemis-9/uk/ac/sanger/artemis/components/ActMain$2.class
  598. artemis-9/uk/ac/sanger/artemis/components/ActMain$3.class
  599. artemis-9/uk/ac/sanger/artemis/components/ActMain$4.class
  600. artemis-9/uk/ac/sanger/artemis/components/ActMain.class
  601. artemis-9/uk/ac/sanger/artemis/components/ActMain.java
  602. artemis-9/uk/ac/sanger/artemis/components/AddMenu$1.class
  603. artemis-9/uk/ac/sanger/artemis/components/AddMenu$10.class
  604. artemis-9/uk/ac/sanger/artemis/components/AddMenu$11.class
  605. artemis-9/uk/ac/sanger/artemis/components/AddMenu$12.class
  606. artemis-9/uk/ac/sanger/artemis/components/AddMenu$13.class
  607. artemis-9/uk/ac/sanger/artemis/components/AddMenu$14.class
  608. artemis-9/uk/ac/sanger/artemis/components/AddMenu$15.class
  609. artemis-9/uk/ac/sanger/artemis/components/AddMenu$16.class
  610. artemis-9/uk/ac/sanger/artemis/components/AddMenu$17.class
  611. artemis-9/uk/ac/sanger/artemis/components/AddMenu$18.class
  612. artemis-9/uk/ac/sanger/artemis/components/AddMenu$19.class
  613. artemis-9/uk/ac/sanger/artemis/components/AddMenu$2.class
  614. artemis-9/uk/ac/sanger/artemis/components/AddMenu$20.class
  615. artemis-9/uk/ac/sanger/artemis/components/AddMenu$21.class
  616. artemis-9/uk/ac/sanger/artemis/components/AddMenu$3.class
  617. artemis-9/uk/ac/sanger/artemis/components/AddMenu$4.class
  618. artemis-9/uk/ac/sanger/artemis/components/AddMenu$5.class
  619. artemis-9/uk/ac/sanger/artemis/components/AddMenu$6.class
  620. artemis-9/uk/ac/sanger/artemis/components/AddMenu$7.class
  621. artemis-9/uk/ac/sanger/artemis/components/AddMenu$8.class
  622. artemis-9/uk/ac/sanger/artemis/components/AddMenu$9.class
  623. artemis-9/uk/ac/sanger/artemis/components/AddMenu.class
  624. artemis-9/uk/ac/sanger/artemis/components/AddMenu.java
  625. artemis-9/uk/ac/sanger/artemis/components/AlignMatchViewer$1.class
  626. artemis-9/uk/ac/sanger/artemis/components/AlignMatchViewer$10.class
  627. artemis-9/uk/ac/sanger/artemis/components/AlignMatchViewer$11.class
  628. artemis-9/uk/ac/sanger/artemis/components/AlignMatchViewer$12.class
  629. artemis-9/uk/ac/sanger/artemis/components/AlignMatchViewer$13.class
  630. artemis-9/uk/ac/sanger/artemis/components/AlignMatchViewer$2.class
  631. artemis-9/uk/ac/sanger/artemis/components/AlignMatchViewer$3.class
  632. artemis-9/uk/ac/sanger/artemis/components/AlignMatchViewer$4.class
  633. artemis-9/uk/ac/sanger/artemis/components/AlignMatchViewer$5.class
  634. artemis-9/uk/ac/sanger/artemis/components/AlignMatchViewer$6.class
  635. artemis-9/uk/ac/sanger/artemis/components/AlignMatchViewer$7.class
  636. artemis-9/uk/ac/sanger/artemis/components/AlignMatchViewer$8.class
  637. artemis-9/uk/ac/sanger/artemis/components/AlignMatchViewer$9.class
  638. artemis-9/uk/ac/sanger/artemis/components/AlignMatchViewer.class
  639. artemis-9/uk/ac/sanger/artemis/components/AlignMatchViewer.java
  640. artemis-9/uk/ac/sanger/artemis/components/AlignmentEvent.class
  641. artemis-9/uk/ac/sanger/artemis/components/AlignmentEvent.java
  642. artemis-9/uk/ac/sanger/artemis/components/AlignmentListener.class
  643. artemis-9/uk/ac/sanger/artemis/components/AlignmentListener.java
  644. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$1.class
  645. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$10.class
  646. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$11.class
  647. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$12.class
  648. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$13.class
  649. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$14.class
  650. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$15.class
  651. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$16.class
  652. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$17.class
  653. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$18.class
  654. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$19.class
  655. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$2.class
  656. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$20.class
  657. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$21.class
  658. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$3.class
  659. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$4.class
  660. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$5.class
  661. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$6.class
  662. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$7.class
  663. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$8.class
  664. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$9.class
  665. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$AlignMatchComparator.class
  666. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer$ColorChooserShades.class
  667. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer.class
  668. artemis-9/uk/ac/sanger/artemis/components/AlignmentViewer.java
  669. artemis-9/uk/ac/sanger/artemis/components/ArtemisCheckboxMenuItem.java
  670. artemis-9/uk/ac/sanger/artemis/components/ArtemisMain$1.class
  671. artemis-9/uk/ac/sanger/artemis/components/ArtemisMain$2.class
  672. artemis-9/uk/ac/sanger/artemis/components/ArtemisMain$3.class
  673. artemis-9/uk/ac/sanger/artemis/components/ArtemisMain$4.class
  674. artemis-9/uk/ac/sanger/artemis/components/ArtemisMain$5.class
  675. artemis-9/uk/ac/sanger/artemis/components/ArtemisMain$6.class
  676. artemis-9/uk/ac/sanger/artemis/components/ArtemisMain$7.class
  677. artemis-9/uk/ac/sanger/artemis/components/ArtemisMain$8.class
  678. artemis-9/uk/ac/sanger/artemis/components/ArtemisMain$9.class
  679. artemis-9/uk/ac/sanger/artemis/components/ArtemisMain.class
  680. artemis-9/uk/ac/sanger/artemis/components/ArtemisMain.java
  681. artemis-9/uk/ac/sanger/artemis/components/BasePlot$1.class
  682. artemis-9/uk/ac/sanger/artemis/components/BasePlot.class
  683. artemis-9/uk/ac/sanger/artemis/components/BasePlot.java
  684. artemis-9/uk/ac/sanger/artemis/components/BasePlotGroup.class
  685. artemis-9/uk/ac/sanger/artemis/components/BasePlotGroup.java
  686. artemis-9/uk/ac/sanger/artemis/components/BioJavaEntrySource.class
  687. artemis-9/uk/ac/sanger/artemis/components/BioJavaEntrySource.java
  688. artemis-9/uk/ac/sanger/artemis/components/CanvasPanel.class
  689. artemis-9/uk/ac/sanger/artemis/components/CanvasPanel.java
  690. artemis-9/uk/ac/sanger/artemis/components/ChoiceFrame$1.class
  691. artemis-9/uk/ac/sanger/artemis/components/ChoiceFrame$2.class
  692. artemis-9/uk/ac/sanger/artemis/components/ChoiceFrame$3.class
  693. artemis-9/uk/ac/sanger/artemis/components/ChoiceFrame.class
  694. artemis-9/uk/ac/sanger/artemis/components/ChoiceFrame.java
  695. artemis-9/uk/ac/sanger/artemis/components/ComparatorDialog$1.class
  696. artemis-9/uk/ac/sanger/artemis/components/ComparatorDialog$2.class
  697. artemis-9/uk/ac/sanger/artemis/components/ComparatorDialog$3.class
  698. artemis-9/uk/ac/sanger/artemis/components/ComparatorDialog$4.class
  699. artemis-9/uk/ac/sanger/artemis/components/ComparatorDialog$5.class
  700. artemis-9/uk/ac/sanger/artemis/components/ComparatorDialog.class
  701. artemis-9/uk/ac/sanger/artemis/components/ComparatorDialog.java
  702. artemis-9/uk/ac/sanger/artemis/components/ComparatorGlue$1.class
  703. artemis-9/uk/ac/sanger/artemis/components/ComparatorGlue$2.class
  704. artemis-9/uk/ac/sanger/artemis/components/ComparatorGlue$3.class
  705. artemis-9/uk/ac/sanger/artemis/components/ComparatorGlue$4.class
  706. artemis-9/uk/ac/sanger/artemis/components/ComparatorGlue$5.class
  707. artemis-9/uk/ac/sanger/artemis/components/ComparatorGlue.class
  708. artemis-9/uk/ac/sanger/artemis/components/ComparatorGlue.java
  709. artemis-9/uk/ac/sanger/artemis/components/ContigTool$1.class
  710. artemis-9/uk/ac/sanger/artemis/components/ContigTool$2.class
  711. artemis-9/uk/ac/sanger/artemis/components/ContigTool$3.class
  712. artemis-9/uk/ac/sanger/artemis/components/ContigTool$4.class
  713. artemis-9/uk/ac/sanger/artemis/components/ContigTool$PopupListener.class
  714. artemis-9/uk/ac/sanger/artemis/components/ContigTool.class
  715. artemis-9/uk/ac/sanger/artemis/components/ContigTool.java
  716. artemis-9/uk/ac/sanger/artemis/components/CorbaEntrySource.class
  717. artemis-9/uk/ac/sanger/artemis/components/CorbaEntrySource.java
  718. artemis-9/uk/ac/sanger/artemis/components/DbfetchEntrySource.class
  719. artemis-9/uk/ac/sanger/artemis/components/DbfetchEntrySource.java
  720. artemis-9/uk/ac/sanger/artemis/components/DisplayAdjustmentEvent.class
  721. artemis-9/uk/ac/sanger/artemis/components/DisplayAdjustmentEvent.java
  722. artemis-9/uk/ac/sanger/artemis/components/DisplayAdjustmentListener.class
  723. artemis-9/uk/ac/sanger/artemis/components/DisplayAdjustmentListener.java
  724. artemis-9/uk/ac/sanger/artemis/components/DisplayComponent.class
  725. artemis-9/uk/ac/sanger/artemis/components/DisplayComponent.java
  726. artemis-9/uk/ac/sanger/artemis/components/EMBLCorbaEntrySource.class
  727. artemis-9/uk/ac/sanger/artemis/components/EMBLCorbaEntrySource.java
  728. artemis-9/uk/ac/sanger/artemis/components/EditMenu$1.class
  729. artemis-9/uk/ac/sanger/artemis/components/EditMenu$10.class
  730. artemis-9/uk/ac/sanger/artemis/components/EditMenu$11.class
  731. artemis-9/uk/ac/sanger/artemis/components/EditMenu$12.class
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  733. artemis-9/uk/ac/sanger/artemis/components/EditMenu$14.class
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  738. artemis-9/uk/ac/sanger/artemis/components/EditMenu$19.class
  739. artemis-9/uk/ac/sanger/artemis/components/EditMenu$2.class
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  741. artemis-9/uk/ac/sanger/artemis/components/EditMenu$21.class
  742. artemis-9/uk/ac/sanger/artemis/components/EditMenu$22.class
  743. artemis-9/uk/ac/sanger/artemis/components/EditMenu$23.class
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  764. artemis-9/uk/ac/sanger/artemis/components/EditMenu.class
  765. artemis-9/uk/ac/sanger/artemis/components/EditMenu.java
  766. artemis-9/uk/ac/sanger/artemis/components/EntryActionListener.class
  767. artemis-9/uk/ac/sanger/artemis/components/EntryActionListener.java
  768. artemis-9/uk/ac/sanger/artemis/components/EntryEdit$1.class
  769. artemis-9/uk/ac/sanger/artemis/components/EntryEdit$10.class
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  789. artemis-9/uk/ac/sanger/artemis/components/EntryEdit.class
  790. artemis-9/uk/ac/sanger/artemis/components/EntryEdit.java
  791. artemis-9/uk/ac/sanger/artemis/components/EntryEditVector.class
  792. artemis-9/uk/ac/sanger/artemis/components/EntryEditVector.java
  793. artemis-9/uk/ac/sanger/artemis/components/EntryFileDialog$1.class
  794. artemis-9/uk/ac/sanger/artemis/components/EntryFileDialog$2.class
  795. artemis-9/uk/ac/sanger/artemis/components/EntryFileDialog$3.class
  796. artemis-9/uk/ac/sanger/artemis/components/EntryFileDialog.class
  797. artemis-9/uk/ac/sanger/artemis/components/EntryFileDialog.java
  798. artemis-9/uk/ac/sanger/artemis/components/EntryGroupDisplay$1.class
  799. artemis-9/uk/ac/sanger/artemis/components/EntryGroupDisplay$2.class
  800. artemis-9/uk/ac/sanger/artemis/components/EntryGroupDisplay.class
  801. artemis-9/uk/ac/sanger/artemis/components/EntryGroupDisplay.java
  802. artemis-9/uk/ac/sanger/artemis/components/EntryGroupInfoDisplay$1.class
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  805. artemis-9/uk/ac/sanger/artemis/components/EntryGroupInfoDisplay.class
  806. artemis-9/uk/ac/sanger/artemis/components/EntryGroupInfoDisplay.java
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  808. artemis-9/uk/ac/sanger/artemis/components/EntryGroupMenu$2.class
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  810. artemis-9/uk/ac/sanger/artemis/components/EntryGroupMenu$4.class
  811. artemis-9/uk/ac/sanger/artemis/components/EntryGroupMenu$5.class
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  813. artemis-9/uk/ac/sanger/artemis/components/EntryGroupMenu$7.class
  814. artemis-9/uk/ac/sanger/artemis/components/EntryGroupMenu.class
  815. artemis-9/uk/ac/sanger/artemis/components/EntryGroupMenu.java
  816. artemis-9/uk/ac/sanger/artemis/components/EntryGroupPanel$1.class
  817. artemis-9/uk/ac/sanger/artemis/components/EntryGroupPanel.class
  818. artemis-9/uk/ac/sanger/artemis/components/EntryGroupPanel.java
  819. artemis-9/uk/ac/sanger/artemis/components/EntryHeaderEdit$1.class
  820. artemis-9/uk/ac/sanger/artemis/components/EntryHeaderEdit.class
  821. artemis-9/uk/ac/sanger/artemis/components/EntryHeaderEdit.java
  822. artemis-9/uk/ac/sanger/artemis/components/ExternalProgramOptions$1.class
  823. artemis-9/uk/ac/sanger/artemis/components/ExternalProgramOptions.class
  824. artemis-9/uk/ac/sanger/artemis/components/ExternalProgramOptions.java
  825. artemis-9/uk/ac/sanger/artemis/components/FeatureAminoAcidViewer$1.class
  826. artemis-9/uk/ac/sanger/artemis/components/FeatureAminoAcidViewer.class
  827. artemis-9/uk/ac/sanger/artemis/components/FeatureAminoAcidViewer.java
  828. artemis-9/uk/ac/sanger/artemis/components/FeatureBaseViewer$1.class
  829. artemis-9/uk/ac/sanger/artemis/components/FeatureBaseViewer.class
  830. artemis-9/uk/ac/sanger/artemis/components/FeatureBaseViewer.java
  831. artemis-9/uk/ac/sanger/artemis/components/FeatureDisplay$1.class
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  843. artemis-9/uk/ac/sanger/artemis/components/FeatureDisplay.java
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  865. artemis-9/uk/ac/sanger/artemis/components/FeatureEdit.java
  866. artemis-9/uk/ac/sanger/artemis/components/FeatureInfo$1.class
  867. artemis-9/uk/ac/sanger/artemis/components/FeatureInfo$2.class
  868. artemis-9/uk/ac/sanger/artemis/components/FeatureInfo.class
  869. artemis-9/uk/ac/sanger/artemis/components/FeatureInfo.java
  870. artemis-9/uk/ac/sanger/artemis/components/FeatureList$1.class
  871. artemis-9/uk/ac/sanger/artemis/components/FeatureList$2.class
  872. artemis-9/uk/ac/sanger/artemis/components/FeatureList.class
  873. artemis-9/uk/ac/sanger/artemis/components/FeatureList.java
  874. artemis-9/uk/ac/sanger/artemis/components/FeatureListFrame$1.class
  875. artemis-9/uk/ac/sanger/artemis/components/FeatureListFrame$2.class
  876. artemis-9/uk/ac/sanger/artemis/components/FeatureListFrame$3.class
  877. artemis-9/uk/ac/sanger/artemis/components/FeatureListFrame.class
  878. artemis-9/uk/ac/sanger/artemis/components/FeatureListFrame.java
  879. artemis-9/uk/ac/sanger/artemis/components/FeaturePlot.class
  880. artemis-9/uk/ac/sanger/artemis/components/FeaturePlot.java
  881. artemis-9/uk/ac/sanger/artemis/components/FeaturePlotGroup$1.class
  882. artemis-9/uk/ac/sanger/artemis/components/FeaturePlotGroup$2.class
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  885. artemis-9/uk/ac/sanger/artemis/components/FeaturePlotGroup.class
  886. artemis-9/uk/ac/sanger/artemis/components/FeaturePlotGroup.java
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  913. artemis-9/uk/ac/sanger/artemis/components/FeaturePopup$5.class
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  918. artemis-9/uk/ac/sanger/artemis/components/FeaturePopup.class
  919. artemis-9/uk/ac/sanger/artemis/components/FeaturePopup.java
  920. artemis-9/uk/ac/sanger/artemis/components/FeatureViewer$1.class
  921. artemis-9/uk/ac/sanger/artemis/components/FeatureViewer.class
  922. artemis-9/uk/ac/sanger/artemis/components/FeatureViewer.java
  923. artemis-9/uk/ac/sanger/artemis/components/FileDialogEntrySource.class
  924. artemis-9/uk/ac/sanger/artemis/components/FileDialogEntrySource.java
  925. artemis-9/uk/ac/sanger/artemis/components/FileViewer$1.class
  926. artemis-9/uk/ac/sanger/artemis/components/FileViewer$2.class
  927. artemis-9/uk/ac/sanger/artemis/components/FileViewer$3.class
  928. artemis-9/uk/ac/sanger/artemis/components/FileViewer.class
  929. artemis-9/uk/ac/sanger/artemis/components/FileViewer.java
  930. artemis-9/uk/ac/sanger/artemis/components/GotoMenu$1.class
  931. artemis-9/uk/ac/sanger/artemis/components/GotoMenu$10.class
  932. artemis-9/uk/ac/sanger/artemis/components/GotoMenu$2.class
  933. artemis-9/uk/ac/sanger/artemis/components/GotoMenu$3.class
  934. artemis-9/uk/ac/sanger/artemis/components/GotoMenu$4.class
  935. artemis-9/uk/ac/sanger/artemis/components/GotoMenu$5.class
  936. artemis-9/uk/ac/sanger/artemis/components/GotoMenu$6.class
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  938. artemis-9/uk/ac/sanger/artemis/components/GotoMenu$8.class
  939. artemis-9/uk/ac/sanger/artemis/components/GotoMenu$9.class
  940. artemis-9/uk/ac/sanger/artemis/components/GotoMenu.class
  941. artemis-9/uk/ac/sanger/artemis/components/GotoMenu.java
  942. artemis-9/uk/ac/sanger/artemis/components/GraphMenu$1.class
  943. artemis-9/uk/ac/sanger/artemis/components/GraphMenu$2.class
  944. artemis-9/uk/ac/sanger/artemis/components/GraphMenu$3.class
  945. artemis-9/uk/ac/sanger/artemis/components/GraphMenu$4.class
  946. artemis-9/uk/ac/sanger/artemis/components/GraphMenu.class
  947. artemis-9/uk/ac/sanger/artemis/components/GraphMenu.java
  948. artemis-9/uk/ac/sanger/artemis/components/InputStreamProgressDialog$1.class
  949. artemis-9/uk/ac/sanger/artemis/components/InputStreamProgressDialog$2.class
  950. artemis-9/uk/ac/sanger/artemis/components/InputStreamProgressDialog$3.class
  951. artemis-9/uk/ac/sanger/artemis/components/InputStreamProgressDialog.class
  952. artemis-9/uk/ac/sanger/artemis/components/InputStreamProgressDialog.java
  953. artemis-9/uk/ac/sanger/artemis/components/KeyChoice.class
  954. artemis-9/uk/ac/sanger/artemis/components/KeyChoice.java
  955. artemis-9/uk/ac/sanger/artemis/components/KeyChooser$1.class
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  957. artemis-9/uk/ac/sanger/artemis/components/KeyChooser$3.class
  958. artemis-9/uk/ac/sanger/artemis/components/KeyChooser.class
  959. artemis-9/uk/ac/sanger/artemis/components/KeyChooser.java
  960. artemis-9/uk/ac/sanger/artemis/components/ListDialog$1.class
  961. artemis-9/uk/ac/sanger/artemis/components/ListDialog$2.class
  962. artemis-9/uk/ac/sanger/artemis/components/ListDialog.class
  963. artemis-9/uk/ac/sanger/artemis/components/ListDialog.java
  964. artemis-9/uk/ac/sanger/artemis/components/ListSelectionPanel$1.class
  965. artemis-9/uk/ac/sanger/artemis/components/ListSelectionPanel$2.class
  966. artemis-9/uk/ac/sanger/artemis/components/ListSelectionPanel$3.class
  967. artemis-9/uk/ac/sanger/artemis/components/ListSelectionPanel$4.class
  968. artemis-9/uk/ac/sanger/artemis/components/ListSelectionPanel.class
  969. artemis-9/uk/ac/sanger/artemis/components/ListSelectionPanel.java
  970. artemis-9/uk/ac/sanger/artemis/components/LogReadListener.class
  971. artemis-9/uk/ac/sanger/artemis/components/LogReadListener.java
  972. artemis-9/uk/ac/sanger/artemis/components/LogViewer$1.class
  973. artemis-9/uk/ac/sanger/artemis/components/LogViewer.class
  974. artemis-9/uk/ac/sanger/artemis/components/LogViewer.java
  975. artemis-9/uk/ac/sanger/artemis/components/MacHandler.java
  976. artemis-9/uk/ac/sanger/artemis/components/MarkerRangeRequester.class
  977. artemis-9/uk/ac/sanger/artemis/components/MarkerRangeRequester.java
  978. artemis-9/uk/ac/sanger/artemis/components/MarkerRangeRequesterEvent.class
  979. artemis-9/uk/ac/sanger/artemis/components/MarkerRangeRequesterEvent.java
  980. artemis-9/uk/ac/sanger/artemis/components/MarkerRangeRequesterListener.class
  981. artemis-9/uk/ac/sanger/artemis/components/MarkerRangeRequesterListener.java
  982. artemis-9/uk/ac/sanger/artemis/components/MessageDialog$1.class
  983. artemis-9/uk/ac/sanger/artemis/components/MessageDialog$2.class
  984. artemis-9/uk/ac/sanger/artemis/components/MessageDialog$3.class
  985. artemis-9/uk/ac/sanger/artemis/components/MessageDialog.class
  986. artemis-9/uk/ac/sanger/artemis/components/MessageDialog.java
  987. artemis-9/uk/ac/sanger/artemis/components/MessageFrame$1.class
  988. artemis-9/uk/ac/sanger/artemis/components/MessageFrame$2.class
  989. artemis-9/uk/ac/sanger/artemis/components/MessageFrame$3.class
  990. artemis-9/uk/ac/sanger/artemis/components/MessageFrame.class
  991. artemis-9/uk/ac/sanger/artemis/components/MessageFrame.java
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  999. artemis-9/uk/ac/sanger/artemis/components/MultiComparator$16.class
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  1001. artemis-9/uk/ac/sanger/artemis/components/MultiComparator$3.class
  1002. artemis-9/uk/ac/sanger/artemis/components/MultiComparator$4.class
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  1034. artemis-9/uk/ac/sanger/artemis/components/PlotMouseListener.java
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  1069. artemis-9/uk/ac/sanger/artemis/components/QualifierTextArea.java
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  1237. artemis-9/uk/ac/sanger/artemis/components/WritableEMBLCorbaEntrySource.java
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  1260. artemis-9/uk/ac/sanger/artemis/components/WriteMenu.java
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  1263. artemis-9/uk/ac/sanger/artemis/components/YesNoDialog.class
  1264. artemis-9/uk/ac/sanger/artemis/components/YesNoDialog.java
  1265. artemis-9/uk/ac/sanger/artemis/components/database/DatabaseEntrySource.class
  1266. artemis-9/uk/ac/sanger/artemis/components/database/DatabaseEntrySource.java
  1267. artemis-9/uk/ac/sanger/artemis/components/database/DatabaseJPanel$1.class
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  1273. artemis-9/uk/ac/sanger/artemis/components/database/DatabaseJPanel.class
  1274. artemis-9/uk/ac/sanger/artemis/components/database/DatabaseJPanel.java
  1275. artemis-9/uk/ac/sanger/artemis/components/database/DatabaseJTree.class
  1276. artemis-9/uk/ac/sanger/artemis/components/database/DatabaseJTree.java
  1277. artemis-9/uk/ac/sanger/artemis/components/database/DatabaseTreeNode.class
  1278. artemis-9/uk/ac/sanger/artemis/components/database/DatabaseTreeNode.java
  1279. artemis-9/uk/ac/sanger/artemis/components/filetree/AbstractCellEditor.class
  1280. artemis-9/uk/ac/sanger/artemis/components/filetree/AbstractCellEditor.java
  1281. artemis-9/uk/ac/sanger/artemis/components/filetree/FileList.class
  1282. artemis-9/uk/ac/sanger/artemis/components/filetree/FileList.java
  1283. artemis-9/uk/ac/sanger/artemis/components/filetree/FileManager$1.class
  1284. artemis-9/uk/ac/sanger/artemis/components/filetree/FileManager$2.class
  1285. artemis-9/uk/ac/sanger/artemis/components/filetree/FileManager$3.class
  1286. artemis-9/uk/ac/sanger/artemis/components/filetree/FileManager$4.class
  1287. artemis-9/uk/ac/sanger/artemis/components/filetree/FileManager$5.class
  1288. artemis-9/uk/ac/sanger/artemis/components/filetree/FileManager$6.class
  1289. artemis-9/uk/ac/sanger/artemis/components/filetree/FileManager.class
  1290. artemis-9/uk/ac/sanger/artemis/components/filetree/FileManager.java
  1291. artemis-9/uk/ac/sanger/artemis/components/filetree/FileNode.class
  1292. artemis-9/uk/ac/sanger/artemis/components/filetree/FileNode.java
  1293. artemis-9/uk/ac/sanger/artemis/components/filetree/FileSystemModel$1.class
  1294. artemis-9/uk/ac/sanger/artemis/components/filetree/FileSystemModel.class
  1295. artemis-9/uk/ac/sanger/artemis/components/filetree/FileSystemModel.java
  1296. artemis-9/uk/ac/sanger/artemis/components/filetree/JTreeTable$1.class
  1297. artemis-9/uk/ac/sanger/artemis/components/filetree/JTreeTable$2.class
  1298. artemis-9/uk/ac/sanger/artemis/components/filetree/JTreeTable$3.class
  1299. artemis-9/uk/ac/sanger/artemis/components/filetree/JTreeTable$4.class
  1300. artemis-9/uk/ac/sanger/artemis/components/filetree/JTreeTable$5.class
  1301. artemis-9/uk/ac/sanger/artemis/components/filetree/JTreeTable$6.class
  1302. artemis-9/uk/ac/sanger/artemis/components/filetree/JTreeTable$7.class
  1303. artemis-9/uk/ac/sanger/artemis/components/filetree/JTreeTable$PopupListener.class
  1304. artemis-9/uk/ac/sanger/artemis/components/filetree/JTreeTable$TreeTableCellEditor.class
  1305. artemis-9/uk/ac/sanger/artemis/components/filetree/JTreeTable$TreeTableCellRenderer.class
  1306. artemis-9/uk/ac/sanger/artemis/components/filetree/JTreeTable.class
  1307. artemis-9/uk/ac/sanger/artemis/components/filetree/JTreeTable.java
  1308. artemis-9/uk/ac/sanger/artemis/components/filetree/LocalAndRemoteFileManager$1.class
  1309. artemis-9/uk/ac/sanger/artemis/components/filetree/LocalAndRemoteFileManager$10.class
  1310. artemis-9/uk/ac/sanger/artemis/components/filetree/LocalAndRemoteFileManager$2.class
  1311. artemis-9/uk/ac/sanger/artemis/components/filetree/LocalAndRemoteFileManager$3.class
  1312. artemis-9/uk/ac/sanger/artemis/components/filetree/LocalAndRemoteFileManager$4.class
  1313. artemis-9/uk/ac/sanger/artemis/components/filetree/LocalAndRemoteFileManager$5.class
  1314. artemis-9/uk/ac/sanger/artemis/components/filetree/LocalAndRemoteFileManager$6.class
  1315. artemis-9/uk/ac/sanger/artemis/components/filetree/LocalAndRemoteFileManager$7.class
  1316. artemis-9/uk/ac/sanger/artemis/components/filetree/LocalAndRemoteFileManager$8.class
  1317. artemis-9/uk/ac/sanger/artemis/components/filetree/LocalAndRemoteFileManager$9.class
  1318. artemis-9/uk/ac/sanger/artemis/components/filetree/LocalAndRemoteFileManager$DbConnectionThread.class
  1319. artemis-9/uk/ac/sanger/artemis/components/filetree/LocalAndRemoteFileManager.class
  1320. artemis-9/uk/ac/sanger/artemis/components/filetree/LocalAndRemoteFileManager.java
  1321. artemis-9/uk/ac/sanger/artemis/components/filetree/RemoteFileNode.class
  1322. artemis-9/uk/ac/sanger/artemis/components/filetree/RemoteFileNode.java
  1323. artemis-9/uk/ac/sanger/artemis/components/filetree/SshJTreeTable$1.class
  1324. artemis-9/uk/ac/sanger/artemis/components/filetree/SshJTreeTable$2.class
  1325. artemis-9/uk/ac/sanger/artemis/components/filetree/SshJTreeTable$3.class
  1326. artemis-9/uk/ac/sanger/artemis/components/filetree/SshJTreeTable$4.class
  1327. artemis-9/uk/ac/sanger/artemis/components/filetree/SshJTreeTable$5.class
  1328. artemis-9/uk/ac/sanger/artemis/components/filetree/SshJTreeTable$6.class
  1329. artemis-9/uk/ac/sanger/artemis/components/filetree/SshJTreeTable$7.class
  1330. artemis-9/uk/ac/sanger/artemis/components/filetree/SshJTreeTable$8.class
  1331. artemis-9/uk/ac/sanger/artemis/components/filetree/SshJTreeTable$9.class
  1332. artemis-9/uk/ac/sanger/artemis/components/filetree/SshJTreeTable$PopupListener.class
  1333. artemis-9/uk/ac/sanger/artemis/components/filetree/SshJTreeTable$TreeTableCellEditor.class
  1334. artemis-9/uk/ac/sanger/artemis/components/filetree/SshJTreeTable$TreeTableCellRenderer.class
  1335. artemis-9/uk/ac/sanger/artemis/components/filetree/SshJTreeTable.class
  1336. artemis-9/uk/ac/sanger/artemis/components/filetree/SshJTreeTable.java
  1337. artemis-9/uk/ac/sanger/artemis/components/filetree/TransferableFileNodeList.class
  1338. artemis-9/uk/ac/sanger/artemis/components/filetree/TransferableFileNodeList.java
  1339. artemis-9/uk/ac/sanger/artemis/components/filetree/TreeTableModel.class
  1340. artemis-9/uk/ac/sanger/artemis/components/filetree/TreeTableModel.java
  1341. artemis-9/uk/ac/sanger/artemis/components/filetree/TreeTableModelAdapter$1.class
  1342. artemis-9/uk/ac/sanger/artemis/components/filetree/TreeTableModelAdapter.class
  1343. artemis-9/uk/ac/sanger/artemis/components/filetree/TreeTableModelAdapter.java
  1344. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneBuilderFrame$1.class
  1345. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneBuilderFrame$2.class
  1346. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneBuilderFrame$3.class
  1347. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneBuilderFrame$4.class
  1348. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneBuilderFrame.class
  1349. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneBuilderFrame.java
  1350. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneComponentTree$GeneTreeSelectionListener.class
  1351. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneComponentTree.class
  1352. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneComponentTree.java
  1353. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneEdit.java
  1354. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneViewerPanel$1.class
  1355. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneViewerPanel$2.class
  1356. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneViewerPanel$3.class
  1357. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneViewerPanel$4.class
  1358. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneViewerPanel$5.class
  1359. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneViewerPanel$6.class
  1360. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneViewerPanel$7.class
  1361. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneViewerPanel$PopupListener.class
  1362. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneViewerPanel.class
  1363. artemis-9/uk/ac/sanger/artemis/components/genebuilder/GeneViewerPanel.java
  1364. artemis-9/uk/ac/sanger/artemis/components/genebuilder/cv/CVPanel$1.class
  1365. artemis-9/uk/ac/sanger/artemis/components/genebuilder/cv/CVPanel$2.class
  1366. artemis-9/uk/ac/sanger/artemis/components/genebuilder/cv/CVPanel$CVCellRenderer.class
  1367. artemis-9/uk/ac/sanger/artemis/components/genebuilder/cv/CVPanel.class
  1368. artemis-9/uk/ac/sanger/artemis/components/genebuilder/cv/CVPanel.java
  1369. artemis-9/uk/ac/sanger/artemis/components/genebuilder/cv/ControlledCurationBox$1.class
  1370. artemis-9/uk/ac/sanger/artemis/components/genebuilder/cv/ControlledCurationBox.class
  1371. artemis-9/uk/ac/sanger/artemis/components/genebuilder/cv/ControlledCurationBox.java
  1372. artemis-9/uk/ac/sanger/artemis/components/genebuilder/cv/CvBoxA$DateVerifier.class
  1373. artemis-9/uk/ac/sanger/artemis/components/genebuilder/cv/CvBoxA.class
  1374. artemis-9/uk/ac/sanger/artemis/components/genebuilder/cv/CvBoxA.java
  1375. artemis-9/uk/ac/sanger/artemis/components/genebuilder/cv/GoBox$1.class
  1376. artemis-9/uk/ac/sanger/artemis/components/genebuilder/cv/GoBox.class
  1377. artemis-9/uk/ac/sanger/artemis/components/genebuilder/cv/GoBox.java
  1378. artemis-9/uk/ac/sanger/artemis/components/genebuilder/cv/JExtendedComboBox.class
  1379. artemis-9/uk/ac/sanger/artemis/components/genebuilder/cv/JExtendedComboBox.java
  1380. artemis-9/uk/ac/sanger/artemis/components/genebuilder/gff/GffPanel.class
  1381. artemis-9/uk/ac/sanger/artemis/components/genebuilder/gff/GffPanel.java
  1382. artemis-9/uk/ac/sanger/artemis/editor/Annotation$1.class
  1383. artemis-9/uk/ac/sanger/artemis/editor/Annotation$PopupListener.class
  1384. artemis-9/uk/ac/sanger/artemis/editor/Annotation.class
  1385. artemis-9/uk/ac/sanger/artemis/editor/Annotation.java
  1386. artemis-9/uk/ac/sanger/artemis/editor/BigPane$1.class
  1387. artemis-9/uk/ac/sanger/artemis/editor/BigPane$2.class
  1388. artemis-9/uk/ac/sanger/artemis/editor/BigPane$3.class
  1389. artemis-9/uk/ac/sanger/artemis/editor/BigPane$4.class
  1390. artemis-9/uk/ac/sanger/artemis/editor/BigPane$5.class
  1391. artemis-9/uk/ac/sanger/artemis/editor/BigPane$6.class
  1392. artemis-9/uk/ac/sanger/artemis/editor/BigPane$7.class
  1393. artemis-9/uk/ac/sanger/artemis/editor/BigPane$8.class
  1394. artemis-9/uk/ac/sanger/artemis/editor/BigPane$winExit.class
  1395. artemis-9/uk/ac/sanger/artemis/editor/BigPane.class
  1396. artemis-9/uk/ac/sanger/artemis/editor/BigPane.java
  1397. artemis-9/uk/ac/sanger/artemis/editor/BrowserControl.class
  1398. artemis-9/uk/ac/sanger/artemis/editor/BrowserControl.java
  1399. artemis-9/uk/ac/sanger/artemis/editor/CommonMenu$1.class
  1400. artemis-9/uk/ac/sanger/artemis/editor/CommonMenu.class
  1401. artemis-9/uk/ac/sanger/artemis/editor/CommonMenu.java
  1402. artemis-9/uk/ac/sanger/artemis/editor/DBViewer$1.class
  1403. artemis-9/uk/ac/sanger/artemis/editor/DBViewer$2.class
  1404. artemis-9/uk/ac/sanger/artemis/editor/DBViewer$3.class
  1405. artemis-9/uk/ac/sanger/artemis/editor/DBViewer$4.class
  1406. artemis-9/uk/ac/sanger/artemis/editor/DBViewer$5.class
  1407. artemis-9/uk/ac/sanger/artemis/editor/DBViewer$6.class
  1408. artemis-9/uk/ac/sanger/artemis/editor/DBViewer$PopupListener.class
  1409. artemis-9/uk/ac/sanger/artemis/editor/DBViewer.class
  1410. artemis-9/uk/ac/sanger/artemis/editor/DBViewer.java
  1411. artemis-9/uk/ac/sanger/artemis/editor/DataCollectionPane$1.class
  1412. artemis-9/uk/ac/sanger/artemis/editor/DataCollectionPane$2.class
  1413. artemis-9/uk/ac/sanger/artemis/editor/DataCollectionPane$3.class
  1414. artemis-9/uk/ac/sanger/artemis/editor/DataCollectionPane$4.class
  1415. artemis-9/uk/ac/sanger/artemis/editor/DataCollectionPane$5.class
  1416. artemis-9/uk/ac/sanger/artemis/editor/DataCollectionPane$6.class
  1417. artemis-9/uk/ac/sanger/artemis/editor/DataCollectionPane.class
  1418. artemis-9/uk/ac/sanger/artemis/editor/DataCollectionPane.java
  1419. artemis-9/uk/ac/sanger/artemis/editor/DataViewInternalFrame$1.class
  1420. artemis-9/uk/ac/sanger/artemis/editor/DataViewInternalFrame$ActiveJSplitPane.class
  1421. artemis-9/uk/ac/sanger/artemis/editor/DataViewInternalFrame$TabChangeListener.class
  1422. artemis-9/uk/ac/sanger/artemis/editor/DataViewInternalFrame.class
  1423. artemis-9/uk/ac/sanger/artemis/editor/DataViewInternalFrame.java
  1424. artemis-9/uk/ac/sanger/artemis/editor/EvidenceViewer$MouseClickListener.class
  1425. artemis-9/uk/ac/sanger/artemis/editor/EvidenceViewer.class
  1426. artemis-9/uk/ac/sanger/artemis/editor/EvidenceViewer.java
  1427. artemis-9/uk/ac/sanger/artemis/editor/ExternalApplication$StderrHandler.class
  1428. artemis-9/uk/ac/sanger/artemis/editor/ExternalApplication$StdoutHandler.class
  1429. artemis-9/uk/ac/sanger/artemis/editor/ExternalApplication.class
  1430. artemis-9/uk/ac/sanger/artemis/editor/ExternalApplication.java
  1431. artemis-9/uk/ac/sanger/artemis/editor/FastaListener.class
  1432. artemis-9/uk/ac/sanger/artemis/editor/FastaListener.java
  1433. artemis-9/uk/ac/sanger/artemis/editor/FastaTextPane$GetzThread.class
  1434. artemis-9/uk/ac/sanger/artemis/editor/FastaTextPane.class
  1435. artemis-9/uk/ac/sanger/artemis/editor/FastaTextPane.java
  1436. artemis-9/uk/ac/sanger/artemis/editor/HitInfo.class
  1437. artemis-9/uk/ac/sanger/artemis/editor/HitInfo.java
  1438. artemis-9/uk/ac/sanger/artemis/editor/MouseOverButton.class
  1439. artemis-9/uk/ac/sanger/artemis/editor/MouseOverButton.java
  1440. artemis-9/uk/ac/sanger/artemis/editor/MultiLineToolTipUI$1.class
  1441. artemis-9/uk/ac/sanger/artemis/editor/MultiLineToolTipUI$MyToolTip.class
  1442. artemis-9/uk/ac/sanger/artemis/editor/MultiLineToolTipUI.class
  1443. artemis-9/uk/ac/sanger/artemis/editor/MultiLineToolTipUI.java
  1444. artemis-9/uk/ac/sanger/artemis/editor/PlafMacros.class
  1445. artemis-9/uk/ac/sanger/artemis/editor/PlafMacros.java
  1446. artemis-9/uk/ac/sanger/artemis/editor/ScrollPanel.class
  1447. artemis-9/uk/ac/sanger/artemis/editor/ScrollPanel.java
  1448. artemis-9/uk/ac/sanger/artemis/io/BetweenRange.class
  1449. artemis-9/uk/ac/sanger/artemis/io/BetweenRange.java
  1450. artemis-9/uk/ac/sanger/artemis/io/BioJavaEntry.class
  1451. artemis-9/uk/ac/sanger/artemis/io/BioJavaEntry.java
  1452. artemis-9/uk/ac/sanger/artemis/io/BioJavaFeature.class
  1453. artemis-9/uk/ac/sanger/artemis/io/BioJavaFeature.java
  1454. artemis-9/uk/ac/sanger/artemis/io/BioJavaSequence.class
  1455. artemis-9/uk/ac/sanger/artemis/io/BioJavaSequence.java
  1456. artemis-9/uk/ac/sanger/artemis/io/BlastDocumentEntry.class
  1457. artemis-9/uk/ac/sanger/artemis/io/BlastDocumentEntry.java
  1458. artemis-9/uk/ac/sanger/artemis/io/BlastEntryInformation.class
  1459. artemis-9/uk/ac/sanger/artemis/io/BlastEntryInformation.java
  1460. artemis-9/uk/ac/sanger/artemis/io/BlastStreamFeature.class
  1461. artemis-9/uk/ac/sanger/artemis/io/BlastStreamFeature.java
  1462. artemis-9/uk/ac/sanger/artemis/io/ChadoCanonicalGene.class
  1463. artemis-9/uk/ac/sanger/artemis/io/ChadoCanonicalGene.java
  1464. artemis-9/uk/ac/sanger/artemis/io/ComparableFeature.class
  1465. artemis-9/uk/ac/sanger/artemis/io/ComparableFeature.java
  1466. artemis-9/uk/ac/sanger/artemis/io/CorbaEntry.class
  1467. artemis-9/uk/ac/sanger/artemis/io/CorbaEntry.java
  1468. artemis-9/uk/ac/sanger/artemis/io/CorbaFeature.class
  1469. artemis-9/uk/ac/sanger/artemis/io/CorbaFeature.java
  1470. artemis-9/uk/ac/sanger/artemis/io/CorbaSequence.class
  1471. artemis-9/uk/ac/sanger/artemis/io/CorbaSequence.java
  1472. artemis-9/uk/ac/sanger/artemis/io/DatabaseDocumentEntry.class
  1473. artemis-9/uk/ac/sanger/artemis/io/DatabaseDocumentEntry.java
  1474. artemis-9/uk/ac/sanger/artemis/io/DatabaseStreamFeature.class
  1475. artemis-9/uk/ac/sanger/artemis/io/DatabaseStreamFeature.java
  1476. artemis-9/uk/ac/sanger/artemis/io/DateStampFeature.class
  1477. artemis-9/uk/ac/sanger/artemis/io/DateStampFeature.java
  1478. artemis-9/uk/ac/sanger/artemis/io/DocumentEntry.class
  1479. artemis-9/uk/ac/sanger/artemis/io/DocumentEntry.java
  1480. artemis-9/uk/ac/sanger/artemis/io/DocumentEntryAutosaveThread.class
  1481. artemis-9/uk/ac/sanger/artemis/io/DocumentEntryAutosaveThread.java
  1482. artemis-9/uk/ac/sanger/artemis/io/DocumentEntryFactory.class
  1483. artemis-9/uk/ac/sanger/artemis/io/DocumentEntryFactory.java
  1484. artemis-9/uk/ac/sanger/artemis/io/DocumentFeature.class
  1485. artemis-9/uk/ac/sanger/artemis/io/DocumentFeature.java
  1486. artemis-9/uk/ac/sanger/artemis/io/EMBLObject.class
  1487. artemis-9/uk/ac/sanger/artemis/io/EMBLObject.java
  1488. artemis-9/uk/ac/sanger/artemis/io/EmblDocumentEntry.class
  1489. artemis-9/uk/ac/sanger/artemis/io/EmblDocumentEntry.java
  1490. artemis-9/uk/ac/sanger/artemis/io/EmblMisc.class
  1491. artemis-9/uk/ac/sanger/artemis/io/EmblMisc.java
  1492. artemis-9/uk/ac/sanger/artemis/io/EmblStreamFeature.class
  1493. artemis-9/uk/ac/sanger/artemis/io/EmblStreamFeature.java
  1494. artemis-9/uk/ac/sanger/artemis/io/EmblStreamSequence.class
  1495. artemis-9/uk/ac/sanger/artemis/io/EmblStreamSequence.java
  1496. artemis-9/uk/ac/sanger/artemis/io/Entry.class
  1497. artemis-9/uk/ac/sanger/artemis/io/Entry.java
  1498. artemis-9/uk/ac/sanger/artemis/io/EntryInformation.class
  1499. artemis-9/uk/ac/sanger/artemis/io/EntryInformation.java
  1500. artemis-9/uk/ac/sanger/artemis/io/EntryInformationException.class
  1501. artemis-9/uk/ac/sanger/artemis/io/EntryInformationException.java
  1502. artemis-9/uk/ac/sanger/artemis/io/EntryStreamEvent.java
  1503. artemis-9/uk/ac/sanger/artemis/io/FastaStreamSequence.class
  1504. artemis-9/uk/ac/sanger/artemis/io/FastaStreamSequence.java
  1505. artemis-9/uk/ac/sanger/artemis/io/Feature.class
  1506. artemis-9/uk/ac/sanger/artemis/io/Feature.java
  1507. artemis-9/uk/ac/sanger/artemis/io/FeatureComparator.class
  1508. artemis-9/uk/ac/sanger/artemis/io/FeatureComparator.java
  1509. artemis-9/uk/ac/sanger/artemis/io/FeatureEnumeration.class
  1510. artemis-9/uk/ac/sanger/artemis/io/FeatureEnumeration.java
  1511. artemis-9/uk/ac/sanger/artemis/io/FeatureHeader.class
  1512. artemis-9/uk/ac/sanger/artemis/io/FeatureHeader.java
  1513. artemis-9/uk/ac/sanger/artemis/io/FeatureTable.class
  1514. artemis-9/uk/ac/sanger/artemis/io/FeatureTable.java
  1515. artemis-9/uk/ac/sanger/artemis/io/FeatureTree$1.class
  1516. artemis-9/uk/ac/sanger/artemis/io/FeatureTree$FeatureEnumerator.class
  1517. artemis-9/uk/ac/sanger/artemis/io/FeatureTree.class
  1518. artemis-9/uk/ac/sanger/artemis/io/FeatureTree.java
  1519. artemis-9/uk/ac/sanger/artemis/io/FeatureVector.class
  1520. artemis-9/uk/ac/sanger/artemis/io/FeatureVector.java
  1521. artemis-9/uk/ac/sanger/artemis/io/FuzzyRange.class
  1522. artemis-9/uk/ac/sanger/artemis/io/FuzzyRange.java
  1523. artemis-9/uk/ac/sanger/artemis/io/GFFDocumentEntry.class
  1524. artemis-9/uk/ac/sanger/artemis/io/GFFDocumentEntry.java
  1525. artemis-9/uk/ac/sanger/artemis/io/GFFEntryInformation.class
  1526. artemis-9/uk/ac/sanger/artemis/io/GFFEntryInformation.java
  1527. artemis-9/uk/ac/sanger/artemis/io/GFFMisc.class
  1528. artemis-9/uk/ac/sanger/artemis/io/GFFMisc.java
  1529. artemis-9/uk/ac/sanger/artemis/io/GFFStreamFeature.class
  1530. artemis-9/uk/ac/sanger/artemis/io/GFFStreamFeature.java
  1531. artemis-9/uk/ac/sanger/artemis/io/GenbankDocumentEntry.class
  1532. artemis-9/uk/ac/sanger/artemis/io/GenbankDocumentEntry.java
  1533. artemis-9/uk/ac/sanger/artemis/io/GenbankMisc.class
  1534. artemis-9/uk/ac/sanger/artemis/io/GenbankMisc.java
  1535. artemis-9/uk/ac/sanger/artemis/io/GenbankStreamFeature.class
  1536. artemis-9/uk/ac/sanger/artemis/io/GenbankStreamFeature.java
  1537. artemis-9/uk/ac/sanger/artemis/io/GenbankStreamSequence.class
  1538. artemis-9/uk/ac/sanger/artemis/io/GenbankStreamSequence.java
  1539. artemis-9/uk/ac/sanger/artemis/io/InvalidKeyException.class
  1540. artemis-9/uk/ac/sanger/artemis/io/InvalidKeyException.java
  1541. artemis-9/uk/ac/sanger/artemis/io/InvalidQualifierException.class
  1542. artemis-9/uk/ac/sanger/artemis/io/InvalidQualifierException.java
  1543. artemis-9/uk/ac/sanger/artemis/io/InvalidRelationException.class
  1544. artemis-9/uk/ac/sanger/artemis/io/InvalidRelationException.java
  1545. artemis-9/uk/ac/sanger/artemis/io/Key.class
  1546. artemis-9/uk/ac/sanger/artemis/io/Key.java
  1547. artemis-9/uk/ac/sanger/artemis/io/KeyVector.class
  1548. artemis-9/uk/ac/sanger/artemis/io/KeyVector.java
  1549. artemis-9/uk/ac/sanger/artemis/io/LazyQualifierValue.class
  1550. artemis-9/uk/ac/sanger/artemis/io/LazyQualifierValue.java
  1551. artemis-9/uk/ac/sanger/artemis/io/LineGroup.class
  1552. artemis-9/uk/ac/sanger/artemis/io/LineGroup.java
  1553. artemis-9/uk/ac/sanger/artemis/io/LineGroupVector.class
  1554. artemis-9/uk/ac/sanger/artemis/io/LineGroupVector.java
  1555. artemis-9/uk/ac/sanger/artemis/io/Location.class
  1556. artemis-9/uk/ac/sanger/artemis/io/Location.java
  1557. artemis-9/uk/ac/sanger/artemis/io/LocationLexer$TokenEnumeration.class
  1558. artemis-9/uk/ac/sanger/artemis/io/LocationLexer.class
  1559. artemis-9/uk/ac/sanger/artemis/io/LocationLexer.java
  1560. artemis-9/uk/ac/sanger/artemis/io/LocationParseException.class
  1561. artemis-9/uk/ac/sanger/artemis/io/LocationParseException.java
  1562. artemis-9/uk/ac/sanger/artemis/io/LocationParseNode.class
  1563. artemis-9/uk/ac/sanger/artemis/io/LocationParseNode.java
  1564. artemis-9/uk/ac/sanger/artemis/io/LocationParseNodeVector.class
  1565. artemis-9/uk/ac/sanger/artemis/io/LocationParseNodeVector.java
  1566. artemis-9/uk/ac/sanger/artemis/io/LowerInteger.class
  1567. artemis-9/uk/ac/sanger/artemis/io/LowerInteger.java
  1568. artemis-9/uk/ac/sanger/artemis/io/MSPcrunchDocumentEntry.class
  1569. artemis-9/uk/ac/sanger/artemis/io/MSPcrunchDocumentEntry.java
  1570. artemis-9/uk/ac/sanger/artemis/io/MSPcrunchEntryInformation.class
  1571. artemis-9/uk/ac/sanger/artemis/io/MSPcrunchEntryInformation.java
  1572. artemis-9/uk/ac/sanger/artemis/io/MSPcrunchStreamFeature.class
  1573. artemis-9/uk/ac/sanger/artemis/io/MSPcrunchStreamFeature.java
  1574. artemis-9/uk/ac/sanger/artemis/io/MiscLineGroup.class
  1575. artemis-9/uk/ac/sanger/artemis/io/MiscLineGroup.java
  1576. artemis-9/uk/ac/sanger/artemis/io/NucFeatureHasher.class
  1577. artemis-9/uk/ac/sanger/artemis/io/OutOfDateException.class
  1578. artemis-9/uk/ac/sanger/artemis/io/OutOfDateException.java
  1579. artemis-9/uk/ac/sanger/artemis/io/Packing.class
  1580. artemis-9/uk/ac/sanger/artemis/io/Packing.java
  1581. artemis-9/uk/ac/sanger/artemis/io/PublicDBDocumentEntry.class
  1582. artemis-9/uk/ac/sanger/artemis/io/PublicDBDocumentEntry.java
  1583. artemis-9/uk/ac/sanger/artemis/io/PublicDBStreamFeature.class
  1584. artemis-9/uk/ac/sanger/artemis/io/PublicDBStreamFeature.java
  1585. artemis-9/uk/ac/sanger/artemis/io/Qualifier.class
  1586. artemis-9/uk/ac/sanger/artemis/io/Qualifier.java
  1587. artemis-9/uk/ac/sanger/artemis/io/QualifierInfo.class
  1588. artemis-9/uk/ac/sanger/artemis/io/QualifierInfo.java
  1589. artemis-9/uk/ac/sanger/artemis/io/QualifierInfoException.class
  1590. artemis-9/uk/ac/sanger/artemis/io/QualifierInfoException.java
  1591. artemis-9/uk/ac/sanger/artemis/io/QualifierInfoHash.class
  1592. artemis-9/uk/ac/sanger/artemis/io/QualifierInfoHash.java
  1593. artemis-9/uk/ac/sanger/artemis/io/QualifierInfoVector.class
  1594. artemis-9/uk/ac/sanger/artemis/io/QualifierInfoVector.java
  1595. artemis-9/uk/ac/sanger/artemis/io/QualifierLazyLoading.class
  1596. artemis-9/uk/ac/sanger/artemis/io/QualifierLazyLoading.java
  1597. artemis-9/uk/ac/sanger/artemis/io/QualifierParseException.class
  1598. artemis-9/uk/ac/sanger/artemis/io/QualifierParseException.java
  1599. artemis-9/uk/ac/sanger/artemis/io/QualifierVector.class
  1600. artemis-9/uk/ac/sanger/artemis/io/QualifierVector.java
  1601. artemis-9/uk/ac/sanger/artemis/io/RWCorbaEntry$1.class
  1602. artemis-9/uk/ac/sanger/artemis/io/RWCorbaEntry.class
  1603. artemis-9/uk/ac/sanger/artemis/io/RWCorbaEntry.java
  1604. artemis-9/uk/ac/sanger/artemis/io/RWCorbaFeature.class
  1605. artemis-9/uk/ac/sanger/artemis/io/RWCorbaFeature.java
  1606. artemis-9/uk/ac/sanger/artemis/io/Range.class
  1607. artemis-9/uk/ac/sanger/artemis/io/Range.java
  1608. artemis-9/uk/ac/sanger/artemis/io/RangeVector.class
  1609. artemis-9/uk/ac/sanger/artemis/io/RangeVector.java
  1610. artemis-9/uk/ac/sanger/artemis/io/RawStreamSequence.class
  1611. artemis-9/uk/ac/sanger/artemis/io/RawStreamSequence.java
  1612. artemis-9/uk/ac/sanger/artemis/io/ReadEvent.class
  1613. artemis-9/uk/ac/sanger/artemis/io/ReadEvent.java
  1614. artemis-9/uk/ac/sanger/artemis/io/ReadFormatException.class
  1615. artemis-9/uk/ac/sanger/artemis/io/ReadFormatException.java
  1616. artemis-9/uk/ac/sanger/artemis/io/ReadListener.class
  1617. artemis-9/uk/ac/sanger/artemis/io/ReadListener.java
  1618. artemis-9/uk/ac/sanger/artemis/io/ReadOnlyEmblStreamFeature.java
  1619. artemis-9/uk/ac/sanger/artemis/io/ReadOnlyEntry.class
  1620. artemis-9/uk/ac/sanger/artemis/io/ReadOnlyEntry.java
  1621. artemis-9/uk/ac/sanger/artemis/io/Sequence.class
  1622. artemis-9/uk/ac/sanger/artemis/io/Sequence.java
  1623. artemis-9/uk/ac/sanger/artemis/io/SimpleDocumentEntry$1.class
  1624. artemis-9/uk/ac/sanger/artemis/io/SimpleDocumentEntry.class
  1625. artemis-9/uk/ac/sanger/artemis/io/SimpleDocumentEntry.java
  1626. artemis-9/uk/ac/sanger/artemis/io/SimpleDocumentFeature.class
  1627. artemis-9/uk/ac/sanger/artemis/io/SimpleDocumentFeature.java
  1628. artemis-9/uk/ac/sanger/artemis/io/SimpleEntryInformation.class
  1629. artemis-9/uk/ac/sanger/artemis/io/SimpleEntryInformation.java
  1630. artemis-9/uk/ac/sanger/artemis/io/StreamFeature.class
  1631. artemis-9/uk/ac/sanger/artemis/io/StreamFeature.java
  1632. artemis-9/uk/ac/sanger/artemis/io/StreamFeatureTable.class
  1633. artemis-9/uk/ac/sanger/artemis/io/StreamFeatureTable.java
  1634. artemis-9/uk/ac/sanger/artemis/io/StreamQualifier.class
  1635. artemis-9/uk/ac/sanger/artemis/io/StreamQualifier.java
  1636. artemis-9/uk/ac/sanger/artemis/io/StreamSequence.class
  1637. artemis-9/uk/ac/sanger/artemis/io/StreamSequence.java
  1638. artemis-9/uk/ac/sanger/artemis/io/StreamSequenceFactory.class
  1639. artemis-9/uk/ac/sanger/artemis/io/StreamSequenceFactory.java
  1640. artemis-9/uk/ac/sanger/artemis/io/UpperInteger.class
  1641. artemis-9/uk/ac/sanger/artemis/io/UpperInteger.java
  1642. artemis-9/uk/ac/sanger/artemis/j2ssh/FTProgress.class
  1643. artemis-9/uk/ac/sanger/artemis/j2ssh/FTProgress.java
  1644. artemis-9/uk/ac/sanger/artemis/j2ssh/FileTransferProgressMonitor.class
  1645. artemis-9/uk/ac/sanger/artemis/j2ssh/FileTransferProgressMonitor.java
  1646. artemis-9/uk/ac/sanger/artemis/j2ssh/SshFileManager$SshGet.class
  1647. artemis-9/uk/ac/sanger/artemis/j2ssh/SshFileManager.class
  1648. artemis-9/uk/ac/sanger/artemis/j2ssh/SshFileManager.java
  1649. artemis-9/uk/ac/sanger/artemis/j2ssh/SshLogin.class
  1650. artemis-9/uk/ac/sanger/artemis/j2ssh/SshLogin.java
  1651. artemis-9/uk/ac/sanger/artemis/j2ssh/SshPSUClient$StdoutStdErrHandler.class
  1652. artemis-9/uk/ac/sanger/artemis/j2ssh/SshPSUClient.class
  1653. artemis-9/uk/ac/sanger/artemis/j2ssh/SshPSUClient.java
  1654. artemis-9/uk/ac/sanger/artemis/plot/AGWindowAlgorithm.class
  1655. artemis-9/uk/ac/sanger/artemis/plot/AGWindowAlgorithm.java
  1656. artemis-9/uk/ac/sanger/artemis/plot/ATDeviationAlgorithm.class
  1657. artemis-9/uk/ac/sanger/artemis/plot/ATDeviationAlgorithm.java
  1658. artemis-9/uk/ac/sanger/artemis/plot/Algorithm.class
  1659. artemis-9/uk/ac/sanger/artemis/plot/Algorithm.java
  1660. artemis-9/uk/ac/sanger/artemis/plot/BaseAlgorithm.class
  1661. artemis-9/uk/ac/sanger/artemis/plot/BaseAlgorithm.java
  1662. artemis-9/uk/ac/sanger/artemis/plot/CSCSAlgorithm.class
  1663. artemis-9/uk/ac/sanger/artemis/plot/CSCSAlgorithm.java
  1664. artemis-9/uk/ac/sanger/artemis/plot/Codon12CorrelationAlgorithm.class
  1665. artemis-9/uk/ac/sanger/artemis/plot/Codon12CorrelationAlgorithm.java
  1666. artemis-9/uk/ac/sanger/artemis/plot/CodonUsageAlgorithm.class
  1667. artemis-9/uk/ac/sanger/artemis/plot/CodonUsageAlgorithm.java
  1668. artemis-9/uk/ac/sanger/artemis/plot/CodonUsageFormatException.class
  1669. artemis-9/uk/ac/sanger/artemis/plot/CodonUsageFormatException.java
  1670. artemis-9/uk/ac/sanger/artemis/plot/CodonUsageWeight.class
  1671. artemis-9/uk/ac/sanger/artemis/plot/CodonUsageWeight.java
  1672. artemis-9/uk/ac/sanger/artemis/plot/CodonWeight.class
  1673. artemis-9/uk/ac/sanger/artemis/plot/CodonWeight.java
  1674. artemis-9/uk/ac/sanger/artemis/plot/CoilFeatureAlgorithm.class
  1675. artemis-9/uk/ac/sanger/artemis/plot/CoilFeatureAlgorithm.java
  1676. artemis-9/uk/ac/sanger/artemis/plot/CumulativeATSkewAlgorithm.class
  1677. artemis-9/uk/ac/sanger/artemis/plot/CumulativeATSkewAlgorithm.java
  1678. artemis-9/uk/ac/sanger/artemis/plot/CumulativeGCSkewAlgorithm.class
  1679. artemis-9/uk/ac/sanger/artemis/plot/CumulativeGCSkewAlgorithm.java
  1680. artemis-9/uk/ac/sanger/artemis/plot/EntropyAlgorithm.class
  1681. artemis-9/uk/ac/sanger/artemis/plot/EntropyAlgorithm.java
  1682. artemis-9/uk/ac/sanger/artemis/plot/FeatureAlgorithm.class
  1683. artemis-9/uk/ac/sanger/artemis/plot/FeatureAlgorithm.java
  1684. artemis-9/uk/ac/sanger/artemis/plot/GCDeviationAlgorithm.class
  1685. artemis-9/uk/ac/sanger/artemis/plot/GCDeviationAlgorithm.java
  1686. artemis-9/uk/ac/sanger/artemis/plot/GCFrameAlgorithm.class
  1687. artemis-9/uk/ac/sanger/artemis/plot/GCFrameAlgorithm.java
  1688. artemis-9/uk/ac/sanger/artemis/plot/GCSDWindowAlgorithm.class
  1689. artemis-9/uk/ac/sanger/artemis/plot/GCSDWindowAlgorithm.java
  1690. artemis-9/uk/ac/sanger/artemis/plot/GCWindowAlgorithm.class
  1691. artemis-9/uk/ac/sanger/artemis/plot/GCWindowAlgorithm.java
  1692. artemis-9/uk/ac/sanger/artemis/plot/HydroAlgorithm.class
  1693. artemis-9/uk/ac/sanger/artemis/plot/HydroAlgorithm.java
  1694. artemis-9/uk/ac/sanger/artemis/plot/HydrophilicityAlgorithm.class
  1695. artemis-9/uk/ac/sanger/artemis/plot/HydrophilicityAlgorithm.java
  1696. artemis-9/uk/ac/sanger/artemis/plot/HydrophobicityAlgorithm.class
  1697. artemis-9/uk/ac/sanger/artemis/plot/HydrophobicityAlgorithm.java
  1698. artemis-9/uk/ac/sanger/artemis/plot/ICDIAlgorithm.class
  1699. artemis-9/uk/ac/sanger/artemis/plot/ICDIAlgorithm.java
  1700. artemis-9/uk/ac/sanger/artemis/plot/KarlinSigAlgorithm.class
  1701. artemis-9/uk/ac/sanger/artemis/plot/KarlinSigAlgorithm.java
  1702. artemis-9/uk/ac/sanger/artemis/plot/MRIAlgorithm.class
  1703. artemis-9/uk/ac/sanger/artemis/plot/MRIAlgorithm.java
  1704. artemis-9/uk/ac/sanger/artemis/plot/NcAlgorithm.class
  1705. artemis-9/uk/ac/sanger/artemis/plot/NcAlgorithm.java
  1706. artemis-9/uk/ac/sanger/artemis/plot/PositionalAsymmetryAlgorithm.class
  1707. artemis-9/uk/ac/sanger/artemis/plot/PositionalAsymmetryAlgorithm.java
  1708. artemis-9/uk/ac/sanger/artemis/plot/ScaledChiAlgorithm.class
  1709. artemis-9/uk/ac/sanger/artemis/plot/ScaledChiAlgorithm.java
  1710. artemis-9/uk/ac/sanger/artemis/plot/UserDataAlgorithm.class
  1711. artemis-9/uk/ac/sanger/artemis/plot/UserDataAlgorithm.java
  1712. artemis-9/uk/ac/sanger/artemis/sequence/AminoAcidSequence.class
  1713. artemis-9/uk/ac/sanger/artemis/sequence/AminoAcidSequence.java
  1714. artemis-9/uk/ac/sanger/artemis/sequence/BasePattern.class
  1715. artemis-9/uk/ac/sanger/artemis/sequence/BasePattern.java
  1716. artemis-9/uk/ac/sanger/artemis/sequence/BasePatternFormatException.class
  1717. artemis-9/uk/ac/sanger/artemis/sequence/BasePatternFormatException.java
  1718. artemis-9/uk/ac/sanger/artemis/sequence/Bases.class
  1719. artemis-9/uk/ac/sanger/artemis/sequence/Bases.java
  1720. artemis-9/uk/ac/sanger/artemis/sequence/Marker.class
  1721. artemis-9/uk/ac/sanger/artemis/sequence/Marker.java
  1722. artemis-9/uk/ac/sanger/artemis/sequence/MarkerChangeEvent.class
  1723. artemis-9/uk/ac/sanger/artemis/sequence/MarkerChangeEvent.java
  1724. artemis-9/uk/ac/sanger/artemis/sequence/MarkerChangeListener.class
  1725. artemis-9/uk/ac/sanger/artemis/sequence/MarkerChangeListener.java
  1726. artemis-9/uk/ac/sanger/artemis/sequence/MarkerInternal.class
  1727. artemis-9/uk/ac/sanger/artemis/sequence/MarkerRange.class
  1728. artemis-9/uk/ac/sanger/artemis/sequence/MarkerRange.java
  1729. artemis-9/uk/ac/sanger/artemis/sequence/MarkerRangeVector.class
  1730. artemis-9/uk/ac/sanger/artemis/sequence/MarkerRangeVector.java
  1731. artemis-9/uk/ac/sanger/artemis/sequence/NoSequenceException.class
  1732. artemis-9/uk/ac/sanger/artemis/sequence/NoSequenceException.java
  1733. artemis-9/uk/ac/sanger/artemis/sequence/SequenceChangeEvent.class
  1734. artemis-9/uk/ac/sanger/artemis/sequence/SequenceChangeEvent.java
  1735. artemis-9/uk/ac/sanger/artemis/sequence/SequenceChangeListener.class
  1736. artemis-9/uk/ac/sanger/artemis/sequence/SequenceChangeListener.java
  1737. artemis-9/uk/ac/sanger/artemis/sequence/Strand.class
  1738. artemis-9/uk/ac/sanger/artemis/sequence/Strand.java
  1739. artemis-9/uk/ac/sanger/artemis/util/ByteBuffer.class
  1740. artemis-9/uk/ac/sanger/artemis/util/ByteBuffer.java
  1741. artemis-9/uk/ac/sanger/artemis/util/DatabaseDocument.class
  1742. artemis-9/uk/ac/sanger/artemis/util/DatabaseDocument.java
  1743. artemis-9/uk/ac/sanger/artemis/util/Document.class
  1744. artemis-9/uk/ac/sanger/artemis/util/Document.java
  1745. artemis-9/uk/ac/sanger/artemis/util/DocumentFactory.class
  1746. artemis-9/uk/ac/sanger/artemis/util/DocumentFactory.java
  1747. artemis-9/uk/ac/sanger/artemis/util/FastVector.class
  1748. artemis-9/uk/ac/sanger/artemis/util/FastVector.java
  1749. artemis-9/uk/ac/sanger/artemis/util/FileDocument.class
  1750. artemis-9/uk/ac/sanger/artemis/util/FileDocument.java
  1751. artemis-9/uk/ac/sanger/artemis/util/InputStreamProgressEvent.class
  1752. artemis-9/uk/ac/sanger/artemis/util/InputStreamProgressEvent.java
  1753. artemis-9/uk/ac/sanger/artemis/util/InputStreamProgressListener.class
  1754. artemis-9/uk/ac/sanger/artemis/util/InputStreamProgressListener.java
  1755. artemis-9/uk/ac/sanger/artemis/util/InputStreamProgressListenerVector.class
  1756. artemis-9/uk/ac/sanger/artemis/util/InputStreamProgressListenerVector.java
  1757. artemis-9/uk/ac/sanger/artemis/util/LinePushBackReader.class
  1758. artemis-9/uk/ac/sanger/artemis/util/LinePushBackReader.java
  1759. artemis-9/uk/ac/sanger/artemis/util/OutOfRangeException.class
  1760. artemis-9/uk/ac/sanger/artemis/util/OutOfRangeException.java
  1761. artemis-9/uk/ac/sanger/artemis/util/ProgressInputStream.class
  1762. artemis-9/uk/ac/sanger/artemis/util/ProgressInputStream.java
  1763. artemis-9/uk/ac/sanger/artemis/util/PushBackException.class
  1764. artemis-9/uk/ac/sanger/artemis/util/PushBackException.java
  1765. artemis-9/uk/ac/sanger/artemis/util/ReadOnlyException.class
  1766. artemis-9/uk/ac/sanger/artemis/util/ReadOnlyException.java
  1767. artemis-9/uk/ac/sanger/artemis/util/RemoteFileDocument$1.class
  1768. artemis-9/uk/ac/sanger/artemis/util/RemoteFileDocument.class
  1769. artemis-9/uk/ac/sanger/artemis/util/RemoteFileDocument.java
  1770. artemis-9/uk/ac/sanger/artemis/util/StringVector$1.class
  1771. artemis-9/uk/ac/sanger/artemis/util/StringVector.class
  1772. artemis-9/uk/ac/sanger/artemis/util/StringVector.java
  1773. artemis-9/uk/ac/sanger/artemis/util/TextDocument.class
  1774. artemis-9/uk/ac/sanger/artemis/util/TextDocument.java
  1775. artemis-9/uk/ac/sanger/artemis/util/URLDocument.class
  1776. artemis-9/uk/ac/sanger/artemis/util/URLDocument.java
  1777. artemis-9/uk/ac/sanger/artemis/util/WorkingGZIPInputStream.class
  1778. artemis-9/uk/ac/sanger/artemis/util/WorkingGZIPInputStream.java
  1779. bin/act
  1780. bin/art
  1781. @dir artemis-9/uk/ac/sanger/ibatis
  1782. Collapse this list.

To install the port: cd /usr/ports/biology/artemis/ && make install clean
To add the package: pkg install artemis

PKGNAME: artemis

distinfo:

SHA256 (artemis_compiled_v9.tar.gz) = ec61fdb7915322b5d6c8ac53aa3576cfe1a5042cc3c738e168306fdbaf4bcbe5
SIZE (artemis_compiled_v9.tar.gz) = 6310269


NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.

Runtime dependencies:
  1. java : java/openjdk8
There are no ports dependent upon this port

Configuration Options
     No options to configure

USES:
shebangfix

Master Sites:
  1. http://www.sanger.ac.uk/Software/Artemis/v9/

Number of commits found: 23

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
13 Oct 2017 11:14:32
Original commit files touched by this commit  9_2
Revision:451981
bapt search for other commits by this committer
Remove dead master sites
21 Apr 2017 16:28:25
Original commit files touched by this commit  9_2
Revision:439093
amdmi3 search for other commits by this committer
- Fix shebangs
- Add NO_ARCH
- Switch to relative links
21 Oct 2016 12:51:41
Original commit files touched by this commit  9_1
Revision:424411  Sanity Test Failure
mat search for other commits by this committer
${RM} already has -f.

PR:		213570
Submitted by:	mat
Exp-run by:	antoine
Sponsored by:	Absolight
11 Mar 2015 14:41:54
Original commit files touched by this commit  9_1
Revision:380989
amdmi3 search for other commits by this committer
- Add empty directory to plist
20 Oct 2014 07:10:48
Original commit files touched by this commit  9_1
Revision:371237
bapt search for other commits by this committer
Cleanup plist
20 Jan 2014 23:06:48
Original commit files touched by this commit  9_1
Revision:340486
bapt search for other commits by this committer
Support stage
20 Sep 2013 15:55:44
Original commit files touched by this commit  9_1
Revision:327709
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
10 Dec 2012 11:25:28
Original commit files touched by this commit  9_1
Revision:308600
bapt search for other commits by this committer
Decommissioning java 1.5 (EOLed since October 2009):
suppress any reference to USE_JAVA=	1.5+ (part1)
01 Oct 2012 14:45:17
Original commit files touched by this commit  9_1
Revision:305130
tabthorpe search for other commits by this committer
- Reassign to the heap at maintainer's request
21 Jul 2011 05:03:02
Original commit files touched by this commit  9_1
linimon search for other commits by this committer
Now that the Java 1.3 and Java 1.4 ports are deprecated and will expire soon,
remove support for them from bsd.java.mk.  As Jikes is not available in Java 1.5
or higher, remove it from bsd.java.mk too (suggested by hq@) and from the ports
which used it (only occurences were USE_JIKES=no).  Support for the Blackdown VM
is also removed, as it is not available in Java 1.5 and higher.

Also remove the mapping from Java 1.1-1.4 to Java 1.5+ in bsd.java.mk to detect
old, broken ports; therefore bump the minimal value of JAVA_VERSION to 1.5.
While here, replace static values of JAVA_VERSION in files/*.in by
%%JAVA_VERSION%% .

PR:             ports/158969
Submitted by:   rene
Tested on:      pointyhat-west -exp
19 Mar 2011 12:38:54
Original commit files touched by this commit  9_1
miwi search for other commits by this committer
- Get Rid MD5 support
06 Jun 2008 13:08:29
Original commit files touched by this commit  9_1
edwin search for other commits by this committer
Bump portrevision due to upgrade of devel/gettext.

The affected ports are the ones with gettext as a run-dependency
according to ports/INDEX-7 (5007 of them) and the ones with USE_GETTEXT
in Makefile (29 of them).

PR:             ports/124340
Submitted by:   edwin@
Approved by:    portmgr (pav)
08 Jul 2007 11:47:58
Original commit files touched by this commit  9
rafan search for other commits by this committer
- Update to version 9
- Don't install CVS directories which are going to be removed
  in next release

PR:             ports/113831
Submitted by:   Thomas Abthorpe <thomas at goodking.ca>
Approved by:    maintainer timeout (20 days)
26 May 2007 21:03:05
Original commit files touched by this commit  7_2
kris search for other commits by this committer
BROKEN: Unfetchable
19 May 2007 20:32:57
Original commit files touched by this commit  7_2
flz search for other commits by this committer
- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
05 Dec 2005 16:57:26
Original commit files touched by this commit  7_1
tdb search for other commits by this committer
- Fix fetch problems

PR:             89971
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
Approved by:    clement (mentor)
20 Sep 2005 14:59:28
Original commit files touched by this commit  7
hq search for other commits by this committer
Update to version 7

PR:             86196
Submitted by:   Tony Maher <anthony.maher@uts.edu.au>
Approved by:    maintainer
20 Mar 2005 14:43:55
Original commit files touched by this commit  6
hq search for other commits by this committer
- Add 'java' category
- Remove incorrect (and unneeded) JAVA_RUN statement

PR:             78761
Submitted by:   me
12 Mar 2005 08:01:19
Original commit files touched by this commit  6
sem search for other commits by this committer
- Update to version 6
- Pass maintainership to submitter

PR:             ports/76219
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar>
Approved by:    maintainer timeout (2 monthes)
31 Mar 2004 03:12:58
Original commit files touched by this commit  4.0_1
trevor search for other commits by this committer
SIZEify (maintainer timeout)
04 Feb 2004 05:21:48
Original commit files touched by this commit  4.0_1
marcus search for other commits by this committer
Bump PORTREVISION on all ports that depend on gettext to aid with upgrading.

(Part 2)
21 Feb 2003 11:01:38
Original commit files touched by this commit  4.0
knu search for other commits by this committer
De-pkg-comment.
22 Dec 2001 14:39:40
Original commit files touched by this commit
kevlo search for other commits by this committer
Initial import of artemis 4.0    

Number of commits found: 23

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