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Some details on the 2023-01-16 website outage.
We just rebooted with several updates: * new HMTLify code * no port maintainer is now highly visible (e.g. https://freshports.org/security/sssd/) * fixed search logic error when using plain/ text details at https://github.com/FreshPorts/freshports/releases/tag/2.2.34
non port: biology/bcftools/pkg-plist
SVNWeb

Number of commits found: 9

Thu, 5 Jan 2023
[ 23:19 Jason W. Bacon (jwb) search for other commits by this committer ]    commit hash:adfc9433b02c9fbd48a51de471dc4f43a22d240f  commit hash:adfc9433b02c9fbd48a51de471dc4f43a22d240f  commit hash:adfc9433b02c9fbd48a51de471dc4f43a22d240f  adfc943 
biology/bcftools: Update to 1.16

New plugin variant-distance to annotate records with distance to the
nearest variant
Numerous minor enhancements and bug fixes

Changes: https://github.com/samtools/bcftools/releases
Sat, 20 Mar 2021
[ 17:14 jwb search for other commits by this committer ] Original commit   Revision:568874 (Only the first 10 of 17 ports in this commit are shown above. View all ports for this commit)
biology/htslib: Update to 1.12
biology/samtools: Update to 1.12
biology/bcftools: Update to 1.12

Numerous enhancements, performance improvements, and bug fixes since 1.11

Build-tested all other htslib dependents, no revbumps should be needed

Reported by:    portscout
Thu, 5 Nov 2020
[ 20:34 jwb search for other commits by this committer ] Original commit   Revision:554157
biology/bcftools: Upgrade to 1.11

Numerous new features, bug fixes and performance enhancements
https://github.com/samtools/bcftools/releases/tag/1.11

Reported by:    portscout
Mon, 3 Aug 2020
[ 18:16 jwb search for other commits by this committer ] Original commit   Revision:544096
biology/bcftools: Upgrade to 1.10.2

Numerous bug fixes and enhancements since 1.9:
https://github.com/samtools/bcftools/tags

Take maintainership per ports/248089.

PR:             ports/248089
Thu, 2 Aug 2018
[ 19:30 fernape search for other commits by this committer ] Original commit   Revision:476247
biology/bcftools: update to 1.9

While here:

* Update LICENSE handling
* Move all commands to bin/

PR:	230169
Submitted by:	ndowens.fbsd@yandex.com
Approved by:	tcberner (mentor)
Differential Revision:	https://reviews.freebsd.org/D16543
Wed, 25 Oct 2017
[ 10:19 pizzamig search for other commits by this committer ] Original commit   Revision:452840 (Only the first 10 of 25 ports in this commit are shown above. View all ports for this commit)
biology/htslib biology/bcftools biology/samtools: Update to 1.6

PR:		223094
Submitted by:	mzaki@niid.go.jp
Approved by:	cartwright@asu.edu (maintainer)
Approved by:	olivier (mentor)
Differential Revision:	https://reviews.freebsd.org/D12768
Thu, 26 May 2016
[ 20:28 pi search for other commits by this committer ] Original commit   Revision:415914
biology/{htslib|samtools|bcftools}: 1.3 -> 1.3.1

Changes:
  https://sourceforge.net/p/samtools/mailman/message/35033807/

PR:		209653
Submitted by:	cartwright@asu.edu (maintainer)
Fri, 25 Dec 2015
[ 01:31 junovitch search for other commits by this committer ] Original commit   Revision:404398 (Only the first 10 of 27 ports in this commit are shown above. View all ports for this commit)
biology/{bcftools,htslib,samtools}: update 1.2.x -> 1.3

- Update ports to 1.3 and set BUILD_DEPENDS of dependent ports to require
  version 1.3 of htslib.
- Add CURL option to htslib
- Add TEST_TARGET with perl and bash dependencies for testing
- Tidy up spacing and pkg-message's

PR:		205524
PR:		205525
PR:		205526
Submitted by:	cartwright@asu.edu (maintainer)
Fri, 5 Jun 2015
[ 21:01 pi search for other commits by this committer ] Original commit   Revision:388638 (Only the first 10 of 12 ports in this commit are shown above. View all ports for this commit)
New port: biology/bcftools

BCFtools is a set of utilities that manipulate variant calls in the
Variant Call Format (VCF) and its binary counterpart BCF. All
commands work transparently with both VCFs and BCFs, both
uncompressed and BGZF-compressed.

WWW: http://www.htslib.org/

PR:		199747
Submitted by:	cartwright@asu.edu

Number of commits found: 9