Port details |
- blast WU BLAST, a software package for sequence similarity searches
- 2.0_20060322 biology
=0 2.0_20060322Version of this port present on the latest quarterly branch.
- BROKEN: Mark as broken: no checksum provided
DEPRECATED: Rights to BLAST 2.0 (WU-BLAST) have been acquired by Advanced Biocomputing, LLC This port expired on: 2014-09-04 IGNORE: is marked as broken: Mark as broken: no checksum provided RESTRICTED: License does not allow redistribution of binaries. You should first register for the software, which is free for academic use.
- There is no maintainer for this port.
- Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org
- Port Added: 2004-11-11 21:47:25
- Last Update: 2014-09-01 11:37:14
- SVN Revision: 366862
- License: not specified in port
- WWW:
- http://blast.wustl.edu
- Description:
- Washington University BLAST (WU BLAST) version 2.0 is a powerful
software package for gene and protein identification, using sensitive,
selective and rapid similarity searches of protein and nucleotide
sequence databases. WU BLAST 2.0 builds upon WU BLAST 1.4, which in turn
was based on the public domain NCBI BLAST version 1.4. While NCBI BLAST
and WU BLAST 1.4 are in the public domain, WU BLAST 2.0 contains
significant new features and extended capabilities, the development of
which began in late 1994, at Washington University in Saint Louis. First
released in May 1996, or more than a year ahead of the NCBI, WU BLAST
2.0 is the original gapped BLAST with statistics and is known for
setting higher standards for sensitivity, speed, correctness and
accuracy, scalability and reliability than competing programs and
implementations. WU BLAST is neither a re-hashed nor "Mac-ified" version
of NCBI BLAST, although WU BLAST in many ways is easier to use. WU BLAST
essentially shares no code with NCBI BLAST, except for portions that
both packages derived from ungapped NCBI BLAST 1.4.
WWW: http://blast.wustl.edu
-
cgit ¦ GitHub ¦ GitHub ¦ GitLab ¦
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- No installation instructions:
- This port has been deleted.
- PKGNAME: wu-blast
- Flavors: there is no flavor information for this port.
- ONLY_FOR_ARCHS: i386 amd64
- distinfo:
- There is no distinfo for this port.
No package information for this port in our database- Sometimes this happens. Not all ports have packages.
- This port has no dependencies.
- There are no ports dependent upon this port
Configuration Options:
- No options to configure
- Options name:
- N/A
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
Commit | Credits | Log message |
2.0_20060322 01 Sep 2014 11:37:14 |
bapt |
Remove non staged ports without pending PR from b* |
2.0_20060322 22 Jun 2014 22:06:01 |
bapt |
Mark as broken: no distinfo provided
With hat: portmgr |
2.0_20060322 19 Jun 2014 11:55:50 |
marino |
biology/blast: Deprecate for removal after 4 September 2014
This unstaged port will be removed for legal reasons.
PR: 190626
Submitted by: Muhammad Rahman
Approved by: portmgr (implicit) |
2.0_20060322 26 May 2014 02:33:39 |
eadler |
Multiple ports: reset maintainers
Maintainers for these ports have been notified on 5 separate occasions
over the course of several months about pending actions required.
We really appreciate the time and effort you put in to maintain
these ports.
If you are still interested in helping to maintain these ports just
reply to me or file a PR and I will happily assign the port to you
again.
Approved by: portmgr (implicit) |
2.0_20060322 03 Jan 2014 15:46:52 |
adamw |
Convert biology to MDOCS and MEXAMPLES |
2.0_20060322 20 Sep 2013 15:55:44 |
bapt |
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology) |
2.0_20060322 01 Oct 2012 14:55:55 |
wen |
- Take maintainership |
2.0_20060322 01 Oct 2012 14:45:17 |
tabthorpe |
- Reassign to the heap at maintainer's request |
2.0_20060322 19 Mar 2011 12:38:54 |
miwi |
- Get Rid MD5 support |
2.0_20060322 09 Jan 2010 23:51:26 |
pgollucci |
- SUB_FILES += pkg-message
PR: ports/142407
Submitted by: Sevan Janiyan <venture37@geeklan.co.uk>
Approved by: Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer) |
2.0_20060322 05 Jan 2009 17:27:29 |
pav |
- Remove conditional checks relevant only on FreeBSD 5.x and older |
2.0_20060322 04 Oct 2007 00:15:01 |
edwin |
Remove always-false/true conditions based on OSVERSION 500000 |
2.0_20060322 02 May 2007 07:14:50 |
edwin |
[patch] cleanup non-supported FreeBSD versions
PR: ports/111725
Submitted by: Edwin Groothuis <edwin@mavetju.org>
Approved by: maintainer timeout |
2.0_20060322 11 Jun 2006 09:13:43 |
pav |
- Update PORTREVISION to match latest release (see main web site)
- Update the port to add other architectures (amd64)
PR: ports/98764
Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer) |
2.0_20060101 14 Jan 2006 19:36:19 |
pav |
- Update to 2.0.20060101
PR: ports/91715
Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer) |
2.0_20050316 18 Mar 2005 13:01:08 |
danfe |
From the PR:
I've added PORTREVISION to the port and set it to the release
date as in the lang/gcc* ports. Since the distinfo file is not
used, this would help users know when they have to update their
ports.
Although newer release might be made, the idea is to bump
PORTREVISION for important feature releases on when significant
bugs are fixed.
Other minor (cosmetic) changes also applied.
PR: ports/78963
Sumbitted by: maintainer |
2.0 18 Nov 2004 07:58:42 |
pav |
- Distfiles change every few days, so drop md5 checking on them
Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer) |
2.0 11 Nov 2004 21:35:04 |
pav |
Add blast, a powerful software package for gene and protein identification,
using sensitive, selective and rapid similarity searches of protein and
nucleotide sequence databases.
PR: ports/69636
Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> |