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Port details
blat Fast tool for local sequence similarity searches
36 biology Deleted on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port 36Version of this port present on the latest quarterly branch.
Deprecated DEPRECATED: unknown license
Expired This port expired on: 2018-08-15
There is no maintainer for this port.
Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org
search for ports maintained by this maintainer
Port Added: 2006-03-15 10:29:12
Last Update: 2018-08-16 21:28:33
SVN Revision: 477371
License: NONE
Description:
SVNWeb : Homepage
pkg-plist: as obtained via: make generate-plist
Expand this list (16 items)
  1. bin/blat
  2. bin/faToNib
  3. bin/faToTwoBit
  4. bin/gfClient
  5. bin/gfServer
  6. bin/nibFrag
  7. bin/pslPretty
  8. bin/pslReps
  9. bin/pslSort
  10. bin/twoBitInfo
  11. bin/twoBitToFa
  12. lib/blat/webBlat/webBlat
  13. lib/blat/webBlat/install.txt
  14. /usr/local/share/licenses/blat-36/catalog.mk
  15. /usr/local/share/licenses/blat-36/LICENSE
  16. /usr/local/share/licenses/blat-36/NONE
Collapse this list.
Dependency lines:
  • blat>0:biology/blat
No installation instructions: this port has been deleted.
The package name of this deleted port was:
PKGNAME: there is no package for this port: _LICENSE_RESTRICTED = delete-package delete-distfiles
Flavors: there is no flavor information for this port.
distinfo:

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. gmake : devel/gmake
Library dependencies:
  1. libpng.so : graphics/png
  2. libmysqlclient.so.18 : databases/mysql56-client
There are no ports dependent upon this port

Configuration Options

USES:

Master Sites:
  1. http://hgwdev.cse.ucsc.edu/~kent/src/
  2. https://users.soe.ucsc.edu/~kent/src/
Port Moves
  • port deleted on 2018-08-16
    REASON: Has expired: unknown license

Number of commits found: 28

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
16 Aug 2018 20:28:33
Original commit files touched by this commit  36
Revision:477371
rene search for other commits by this committer
Remove expired ports:
2018-08-16 net/traceroute: Upstream gone
2018-08-15 net/e169-stats: unknown license
2018-08-15 net/l4ip: unknown license
2018-08-15 net/dhcprelay: unknown license
2018-08-15 emulators/m2000: unknown license
2018-08-15 textproc/ant-xinclude-task: unknown license
2018-08-15 textproc/bomstrip: unknown license
2018-08-15 x11-fonts/ecofont: unknown license
2018-08-15 mail/roundcube-groupvice: unknown license
2018-08-15 security/pft: unknown license
2018-08-15 devel/kickassembler: unknown license
2018-08-15 devel/gdbmods: unknown license
2018-08-15 devel/as31: unknown license
2018-08-15 databases/dbf2mysql: unknown license
(Only the first 15 lines of the commit message are shown above View all of this commit message)
13 Jul 2018 09:56:57
Original commit files touched by this commit  36
Revision:474572
antoine search for other commits by this committer
Deprecate unmaintained ports under the NONE license
10 Jun 2017 09:01:19
Original commit files touched by this commit  36
Revision:443073
amdmi3 search for other commits by this committer
- Update WWW
- Add LICENSE
- Simplify installation
18 Dec 2016 04:46:54
Original commit files touched by this commit  36
Revision:428834
marino search for other commits by this committer
biology/blat: Fix build on DF (taken from dports)
30 Sep 2016 19:40:13
Original commit files touched by this commit  36
Revision:423017
marino search for other commits by this committer
biology/blat: Fix build with non-base SSL
19 May 2016 11:09:14
Original commit files touched by this commit  36
Revision:415503
amdmi3 search for other commits by this committer
- Fix trailing whitespace in pkg-messages

Approved by:	portmgr blanket
16 May 2016 18:20:42
Original commit files touched by this commit  36
Revision:415352
amdmi3 search for other commits by this committer
- Convert to USES=mysql
- Cosmetic fixes
01 Apr 2016 13:29:17
Original commit files touched by this commit  36
Revision:412344
mat search for other commits by this committer
Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.

With hat:	portmgr
Sponsored by:	Absolight
01 Jan 2015 18:17:54
Original commit files touched by this commit  36
Revision:376018
riggs search for other commits by this committer
Update to upstream version 36

PR:		196339
Submitted by:	koue@chaosophia.net
25 Dec 2014 20:54:43
Original commit files touched by this commit  35_1
Revision:375598
bapt search for other commits by this committer
Bump portrevision after png update
25 Dec 2014 19:04:27
Original commit files touched by this commit  35
Revision:375594
antoine search for other commits by this committer
Change libpng15.so to libpng.so in LIB_DEPENDS to prepare the upgrade
20 Dec 2014 17:27:09
Original commit files touched by this commit  35
Revision:375014
bapt search for other commits by this committer
Cleanup plist
25 Jun 2014 08:55:56
Original commit files touched by this commit  35
Revision:359207
antoine search for other commits by this committer
Put HOME in MAKE_ARGS to handle pverride of HOME in MAKE_ENV from bsd.port.mk
07 Mar 2014 15:52:40
Original commit files touched by this commit  35
Revision:347402
bapt search for other commits by this committer
Convert b* to USES=zip
27 Feb 2014 11:46:11
Original commit files touched by this commit  35
Revision:346318
miwi search for other commits by this committer
- Update to 35

PR:		184245
12 Nov 2013 22:02:02
Original commit files touched by this commit  34
Revision:333628
bapt search for other commits by this committer
Add stage support
Use bsdtar to extract the distfile
Rip out USE_GMAKE
20 Sep 2013 15:55:44
Original commit files touched by this commit  34
Revision:327709
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
19 Jun 2013 18:44:33
Original commit files touched by this commit  34
Revision:321305
bsam search for other commits by this committer
. remove pkg-plist (along with the previous commit).
19 Jun 2013 18:43:13
Original commit files touched by this commit  34
Revision:321304
bsam search for other commits by this committer
. NOPORTDOCS -> PORT_OPTIONS:MDOCS;
. use PORTDOCS and PORTDATA at makefile;
. mute mkdirs;
. add padding to PKGMESSAGE;
. remove article from COMMENT.
01 Oct 2012 14:45:17
Original commit files touched by this commit  34
Revision:305130
tabthorpe search for other commits by this committer
- Reassign to the heap at maintainer's request
19 Mar 2011 12:38:54
Original commit files touched by this commit  34

miwi search for other commits by this committer
- Get Rid MD5 support
25 Jul 2008 14:34:52
Original commit files touched by this commit  34

pav search for other commits by this committer
- Remove USE_GCC where it can be satisfied with base compiler on following
  FreeBSD versions: 5.3 and up, 6.x, 7.x, 8-CURRENT
30 Apr 2008 23:19:29
Original commit files touched by this commit  34

okazaki search for other commits by this committer
Update to version 34.
Remove BROKEN.

PR:             123218
Submitted by:   maintainer
04 Jan 2008 15:14:52
Original commit files touched by this commit  33

arved search for other commits by this committer
Fix build on !i386

PR:             118922
Submitted by:   Motomichi Matsuzaki <mzaki@biol.s.u-tokyo.ac.jp>
Approved by:    Fernan Aguero <fernan@iib.unsam.edu.ar>
04 Dec 2007 23:08:55
Original commit files touched by this commit  33

pav search for other commits by this committer
- Mark BROKEN outside i386: does not compile

Reported by:    pointyhat
Approved by:    portmgr (hat)
02 Oct 2007 09:10:48
Original commit files touched by this commit  33

linimon search for other commits by this committer
Mark as broken on gcc4.2.
02 May 2007 07:15:18
Original commit files touched by this commit  33

edwin search for other commits by this committer
[patch] cleanup non-supported FreeBSD versions

PR:             ports/111726
Submitted by:   Edwin Groothuis <edwin@mavetju.org>
Approved by:    maintainer timeout
15 Mar 2006 10:26:12
Original commit files touched by this commit  33

garga search for other commits by this committer
Add blat 33, a fast tool for local sequence similarity searches.

PR:             ports/93060
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar>

Number of commits found: 28

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