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non port: biology/bowtie/Makefile
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Number of commits found: 14

Fri, 26 Jul 2019
[ 20:46 gerald ] Original commit   Revision:507372
507372 Mk/bsd.ruby.mk
507372 accessibility/atkmm/Makefile
507372 accessibility/kmag/Makefile
507372 accessibility/kmousetool/Makefile
507372 accessibility/kmouth/Makefile
507372 accessibility/libqaccessibilityclient/Makefile
507372 accessibility/qt5-speech/Makefile
507372 archivers/R-cran-zip/Makefile
507372 archivers/ark/Makefile
507372 archivers/brotli/Makefile

(Only the first 10 of 3853 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
Wed, 12 Dec 2018
[ 01:35 gerald ] Original commit   Revision:487272
487272 Mk/bsd.ruby.mk
487272 accessibility/atkmm/Makefile
487272 accessibility/kmag/Makefile
487272 accessibility/kmousetool/Makefile
487272 accessibility/kmouth/Makefile
487272 accessibility/qt5-speech/Makefile
487272 archivers/R-cran-zip/Makefile
487272 archivers/ark/Makefile
487272 archivers/brotli/Makefile
487272 archivers/c-blosc/Makefile

(Only the first 10 of 3168 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
Sat, 3 Nov 2018
[ 23:24 jwb ] Original commit   Revision:483954
483954 biology/bowtie/Makefile
483954 biology/bowtie/files/patch-ebwt.h
biology/bowtie: Patch for gcc8 and clean up

PR:             232929
Reported by:    gerald
Approved by:    jrm (mentor, implicit)
[ 23:16 jwb ] Original commit   Revision:483953
483953 biology/bowtie/Makefile
483953 biology/bowtie/files/patch-ebwt.h
biology/bowtie: Revert previous commit with missing log message
[ 21:10 jwb ] Original commit   Revision:483910
483910 biology/bowtie/Makefile
483910 biology/bowtie/files/patch-ebwt.h
biology/bowtie: Patch
Mon, 10 Sep 2018
[ 13:14 mat ] Original commit   Revision:479406
479406 accessibility/kmag/Makefile
479406 accessibility/kmousetool/Makefile
479406 accessibility/kmouth/Makefile
479406 archivers/ark/Makefile
479406 archivers/brotli/Makefile
479406 archivers/erlang-snappy/Makefile
479406 archivers/lzop/Makefile
479406 astro/geographiclib/Makefile
479406 astro/libkgeomap/Makefile
479406 astro/marble/Makefile

(Only the first 10 of 995 ports in this commit are shown above. View all ports for this commit)
Add DOCS options to ports that should have one.

Also various fixes related to said option.

PR:		230864
Submitted by:	mat
exp-runs by:	antoine
Sun, 29 Jul 2018
[ 22:18 gerald ] Original commit   Revision:475857
475857 Mk/bsd.ruby.mk
475857 accessibility/atkmm/Makefile
475857 archivers/brotli/Makefile
475857 archivers/c-blosc/Makefile
475857 archivers/innoextract/Makefile
475857 archivers/kf5-karchive/Makefile
475857 archivers/lazperf/Makefile
475857 archivers/libpar2/Makefile
475857 archivers/paq/Makefile
475857 archivers/pxz/Makefile

(Only the first 10 of 1480 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISION for ports depending on the canonical version of GCC
in the ports tree (via Mk/bsd.default-versions.mk and lang/gcc) which
has now moved from GCC 6 to GCC 7 by default.

This includes ports
 - featuring USE_GCC=yes or USE_GCC=any,
 - featuring USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and those
 - with USES=compiler specifying one of openmp, nestedfct, c11, c++0x,
   c++11-lib, c++11-lang, c++14-lang, c++17-lang, or gcc-c++11-lib.

PR:		222542
Sat, 10 Mar 2018
[ 17:46 gerald ] Original commit   Revision:464084
464084 archivers/pxz/Makefile
464084 archivers/zip-ada/Makefile
464084 astro/R-cran-maptools/Makefile
464084 astro/astrometry/Makefile
464084 astro/kstars-kde4/Makefile
464084 astro/nightfall/Makefile
464084 astro/py-RO/Makefile
464084 astro/py-aipy/Makefile
464084 astro/py-astLib/Makefile
464084 astro/py-astropy/Makefile

(Only the first 10 of 1104 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079).
Wed, 31 Jan 2018
[ 01:07 jwb ] Original commit   Revision:460452
460452 audio/praat/Makefile
460452 biology/bowtie/Makefile
460452 biology/bwa/Makefile
460452 biology/cd-hit/Makefile
460452 biology/cdbfasta/Makefile
460452 biology/fastool/Makefile
460452 biology/fastx-toolkit/Makefile
460452 biology/gmap/Makefile
460452 biology/jellyfish/Makefile
460452 biology/libgtextutils/Makefile

(Only the first 10 of 56 ports in this commit are shown above. View all ports for this commit)
Multiple ports:
Change maintainer email bacon4000@gmail.com to jwb@FreeBSD.org
Remove Created by comments for same user

Approved by: jrm (mentor)
Differential Revision:  https://reviews.freebsd.org/D14128
Sun, 10 Sep 2017
[ 20:55 gerald ] Original commit   Revision:449591
449591 accessibility/atkmm/Makefile
449591 archivers/brotli/Makefile
449591 archivers/c-blosc/Makefile
449591 archivers/kf5-karchive/Makefile
449591 archivers/libpar2/Makefile
449591 archivers/paq/Makefile
449591 archivers/pxz/Makefile
449591 archivers/py-brotli/Makefile
449591 archivers/rvm/Makefile
449591 astro/geographiclib/Makefile

(Only the first 10 of 1201 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISION for ports depending on the canonical version of GCC
(via Mk/bsd.default-versions.mk and lang/gcc) which has moved from
GCC 5.4 to GCC 6.4 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++11-lang,
   c++14-lang, c++0x, c11, or gcc-c++11-lib.

PR:		219275
Sat, 22 Apr 2017
[ 09:25 miwi ] Original commit   Revision:439143
439143 archivers/rox-archive/Makefile
439143 astro/gpsd/Makefile
439143 audio/codec2/Makefile
439143 audio/gtkpod/Makefile
439143 benchmarks/expedite/Makefile
439143 benchmarks/tsung/Makefile
439143 biology/bowtie/Makefile
- Fix shebangs
Sat, 1 Apr 2017
[ 15:23 gerald ] Original commit   Revision:437439
437439 archivers/kf5-karchive/Makefile
437439 archivers/paq/Makefile
437439 archivers/pxz/Makefile
437439 archivers/py-brotli/Makefile
437439 archivers/rvm/Makefile
437439 astro/geographiclib/Makefile
437439 astro/gpstk/Makefile
437439 astro/kstars/Makefile
437439 astro/libosmium/Makefile
437439 astro/nightfall/Makefile

(Only the first 10 of 1118 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISIONs for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.9.4 to GCC 5.4 (at least under some
circumstances such as versions of FreeBSD or platforms).

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using using Mk/bsd.octave.mk which in turn has USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++14-lang,
   c++11-lang, c++0x, c11, or gcc-c++11-lib.

PR:		216707
Sun, 20 Nov 2016
[ 09:38 gerald ] Original commit   Revision:426566
426566 archivers/paq/Makefile
426566 archivers/pxz/Makefile
426566 astro/gpstk/Makefile
426566 audio/codec2/Makefile
426566 audio/csound/Makefile
426566 audio/deadbeef/Makefile
426566 audio/firefly/Makefile
426566 audio/funktrackergold/Makefile
426566 audio/idjc/Makefile
426566 audio/libsoxr/Makefile

(Only the first 10 of 364 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISIONS for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.8.5 to GCC 4.9.4 (at least under some
circumstances such as versions of FreeBSD or platforms).

In particular that is ports with USE_GCC=yes, USE_GCC=any, or one of
gcc-c++11-lib, openmp, nestedfct, c++11-lib as well as c++14-lang,
c++11-lang, c++0x, c11 requested via USES=compiler.
Sat, 5 Mar 2016
[ 13:21 rakuco ] Original commit   Revision:410180
410180 biology/Makefile
410180 biology/bowtie
410180 biology/bowtie/Makefile
410180 biology/bowtie/distinfo
410180 biology/bowtie/files
410180 biology/bowtie/files/patch-Makefile
410180 biology/bowtie/pkg-descr
410180 biology/bowtie/pkg-plist
New port: biology/bowtie.

Bowtie is an ultrafast, memory-efficient short read aligner. It aligns short
DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp
reads per hour.

WWW: http://bowtie-bio.sourceforge.net/index.shtml

PR:		206939
Submitted by:	Jason Bacon <bacon4000@gmail.com>

Number of commits found: 14

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