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Port details
btllib Bioinformatics Technology Lab common code library
1.6.2 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 1.6.2Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2023-07-21 22:27:04
Last Update: 2023-07-21 22:24:04
Commit Hash: 29bea60
Also Listed In: devel
License: GPLv3
WWW:
https://github.com/bcgsc/btllib
Description:
Bioinformatics Technology Lab's common code library in C++.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (38 items)
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  1. /usr/local/share/licenses/btllib-1.6.2/catalog.mk
  2. /usr/local/share/licenses/btllib-1.6.2/LICENSE
  3. /usr/local/share/licenses/btllib-1.6.2/GPLv3
  4. bin/indexlr
  5. bin/mi_bf_generate
  6. bin/randseq
  7. include/btllib/aahash.hpp
  8. include/btllib/aahash_consts.hpp
  9. include/btllib/bloom_filter.hpp
  10. include/btllib/counting_bloom_filter-inl.hpp
  11. include/btllib/counting_bloom_filter.hpp
  12. include/btllib/cpptoml.h
  13. include/btllib/cstring.hpp
  14. include/btllib/data_stream.hpp
  15. include/btllib/graph.hpp
  16. include/btllib/indexlr.hpp
  17. include/btllib/mi_bloom_filter-inl.hpp
  18. include/btllib/mi_bloom_filter.hpp
  19. include/btllib/nthash.hpp
  20. include/btllib/nthash_consts.hpp
  21. include/btllib/nthash_lowlevel.hpp
  22. include/btllib/order_queue.hpp
  23. include/btllib/process_pipeline.hpp
  24. include/btllib/randseq.hpp
  25. include/btllib/seq.hpp
  26. include/btllib/seq_reader.hpp
  27. include/btllib/seq_reader_fasta_module.hpp
  28. include/btllib/seq_reader_fastq_module.hpp
  29. include/btllib/seq_reader_multiline_fasta_module.hpp
  30. include/btllib/seq_reader_multiline_fastq_module.hpp
  31. include/btllib/seq_reader_sam_module.hpp
  32. include/btllib/seq_writer.hpp
  33. include/btllib/status.hpp
  34. include/btllib/util.hpp
  35. lib/libbtllib.so
  36. @owner
  37. @group
  38. @mode
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Dependency lines:
  • btllib>0:biology/btllib
To install the port:
cd /usr/ports/biology/btllib/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/btllib
  • pkg install btllib
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: btllib
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1689975725 SHA256 (bcgsc-btllib-v1.6.2_GH0.tar.gz) = cba796cb83791e8524f5108459892a1131748cda55189c9acea21d4bdb80e7a0 SIZE (bcgsc-btllib-v1.6.2_GH0.tar.gz) = 848942

Expand this list (4 items)

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SHA256 (p-ranav-argparse-15d745f_GH0.tar.gz) = f033d4eb4a430b4ae4bf3c2a40e087709bf77462c1f9968ae07828437219a370 SIZE (p-ranav-argparse-15d745f_GH0.tar.gz) = 105608 SHA256 (skystrife-cpptoml-fededad_GH0.tar.gz) = dd2d129b67f537ae7d6f8d8d084c8c0d772d0f5b4b3118c1892e67ff536e335e SIZE (skystrife-cpptoml-fededad_GH0.tar.gz) = 47398

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Packages (timestamps in pop-ups are UTC):
btllib
ABIlatestquarterly
FreeBSD:12:aarch64-1.6.2
FreeBSD:12:amd641.6.21.6.2
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i3861.6.21.6.2
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch641.6.21.6.2
FreeBSD:13:amd641.6.21.6.2
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i3861.6.21.6.2
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64-1.6.2
FreeBSD:13:riscv64--
FreeBSD:14:aarch641.6.21.6.2
FreeBSD:14:amd641.6.21.6.2
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i3861.6.21.6.2
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
FreeBSD:14:riscv64--
FreeBSD:15:amd641.6.2-
FreeBSD:15:armv6--
FreeBSD:15:armv7--
FreeBSD:15:i3861.6.2-
FreeBSD:15:mips64--
FreeBSD:15:powerpc641.6.2-
FreeBSD:15:riscv64--
 
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. bash : shells/bash
  2. samtools : biology/samtools
  3. cmake : devel/cmake-core
  4. meson : devel/meson
  5. ninja : devel/ninja
  6. pkgconf>=1.3.0_1 : devel/pkgconf
  7. python3.9 : lang/python39
Runtime dependencies:
  1. samtools : biology/samtools
Library dependencies:
  1. libsdsl.so : devel/sdsl-lite
This port is required by:
for Libraries
  1. biology/abyss
Configuration Options:
No options to configure
Options name:
biology_btllib
USES:
meson pkgconfig python:build shebangfix
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. https://codeload.github.com/bcgsc/btllib/tar.gz/v1.6.2?dummy=/
Collapse this list.

Number of commits found: 1

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
1.6.2
21 Jul 2023 22:24:04
commit hash: 29bea60c598052bbf71415e494a179adbe143a8ecommit hash: 29bea60c598052bbf71415e494a179adbe143a8ecommit hash: 29bea60c598052bbf71415e494a179adbe143a8ecommit hash: 29bea60c598052bbf71415e494a179adbe143a8e files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
biology/btllib: New port: Bioinformatics Technology Lab common code library

Number of commits found: 1
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