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Why was the website so slow for so long?

The cause of the slowdown was a change to the ZFS dataset. In conjunction with the database server, very little caching was being done. This combination resulted in increased disk I/O as the system churned through the database. Details in the blog post which outlines the various things which changed. Many graphs.

non port: biology/emboss/files/patch-dbxgcg.c
SVNWeb

Number of commits found: 2

Sun, 13 Apr 2008
[ 07:22 rafan ] Original commit 
1.50 biology/emboss/Makefile
1.27 biology/emboss/distinfo
1.2 biology/emboss/files/patch-ajindex.c
1.2 biology/emboss/files/patch-ajindex.h
1.2 biology/emboss/files/patch-ajpdb.c
1.2 biology/emboss/files/patch-ajseqdb.c
1.2 biology/emboss/files/patch-dbxfasta.c
1.2 biology/emboss/files/patch-dbxflat.c
1.2 biology/emboss/files/patch-dbxgcg.c
1.2 biology/emboss/files/patch-embindex.c

(Only the first 10 of 14 ports in this commit are shown above. View all ports for this commit)
- Update to 5.0.0

PR:             ports/122437
Submitted by:   Fernan Aguero <fernan at iib.unsam.edu.ar> (maintainer)
Fri, 31 Mar 2006
[ 09:43 thierry ] Original commit 
1.304 UPDATING
1.6 biology/embassy/Makefile
1.4 biology/embassy/distinfo
1.2 biology/embassy/files/domainatrix-patch-Makefile.in
1.2 biology/embassy/files/emnu-patch-Makefile.in
1.3 biology/embassy/pkg-plist
1.47 biology/emboss/Makefile
1.26 biology/emboss/distinfo
1.1 biology/emboss/files/patch-ajindex.c
1.1 biology/emboss/files/patch-ajindex.h

(Only the first 10 of 23 ports in this commit are shown above. View all ports for this commit)
For EMBOSS:

        This patch brings EMBOSS up to date with the current version.

        i.   The patches included in files/ are bugfixes for files in
             EMBOSS-3.0.0 that appeared after the release. They are
             documented in ftp://emboss.open-bio.org/pub/EMBOSS/fixes/README

             This is just 'for the record' so that we remember to remove these
             patches in the next update.

        ii.  EMBOSS is now installed by default in LOCALBASE/emboss
             This is to avoid CONFLICTS with other ports that install files
             with the same names. Installing EMBOSS to another PREFIX is also
             possible.
(Only the first 15 lines of the commit message are shown above View all of this commit message)

Number of commits found: 2

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