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Port details
exonerate Generic tool for sequence alignment
2.4.0 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 2.4.0Version of this port present on the latest quarterly branch.
Maintainer: mzaki@niid.go.jp search for ports maintained by this maintainer
Port Added: 2018-07-13 07:02:53
Last Update: 2021-04-06 14:31:07
Commit Hash: 305f148
License: GPLv3
Description:
SVNWeb : git : Homepage
pkg-plist: as obtained via: make generate-plist
Expand this list (37 items)
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  1. /usr/local/share/licenses/exonerate-2.4.0/catalog.mk
  2. /usr/local/share/licenses/exonerate-2.4.0/LICENSE
  3. /usr/local/share/licenses/exonerate-2.4.0/GPLv3
  4. bin/exonerate
  5. bin/ipcress
  6. bin/exonerate-server
  7. bin/fastaclean
  8. bin/fastaclip
  9. bin/fastachecksum
  10. bin/fastacomposition
  11. bin/fastadiff
  12. bin/fastaexplode
  13. bin/fastafetch
  14. bin/fastahardmask
  15. bin/fastaindex
  16. bin/fastalength
  17. bin/fastanrdb
  18. bin/fastaoverlap
  19. bin/fastareformat
  20. bin/fastaremove
  21. bin/fastarevcomp
  22. bin/fastasoftmask
  23. bin/fastasort
  24. bin/fastasplit
  25. bin/fastasubseq
  26. bin/fastatranslate
  27. bin/fastavalidcds
  28. bin/fasta2esd
  29. bin/fastaannotatecdna
  30. bin/esd2esi
  31. man/man1/exonerate-server.1.gz
  32. man/man1/fastautils.1.gz
  33. man/man1/exonerate.1.gz
  34. man/man1/ipcress.1.gz
  35. @owner
  36. @group
  37. @mode
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Dependency lines:
  • exonerate>0:biology/exonerate
To install the port: cd /usr/ports/biology/exonerate/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/exonerate
  • pkg install exonerate
PKGNAME: exonerate
Flavors: there is no flavor information for this port.
distinfo:
Packages (timestamps in pop-ups are UTC):
exonerate
ABIlatestquarterly
FreeBSD:11:aarch642.4.02.4.0
FreeBSD:11:amd642.4.02.4.0
FreeBSD:11:armv6-2.4.0
FreeBSD:11:i3862.4.02.4.0
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch642.4.02.4.0
FreeBSD:12:amd642.4.02.4.0
FreeBSD:12:armv62.4.02.4.0
FreeBSD:12:armv72.4.02.4.0
FreeBSD:12:i3862.4.02.4.0
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64-2.4.0
FreeBSD:13:aarch642.4.02.4.0
FreeBSD:13:amd642.4.02.4.0
FreeBSD:13:armv62.4.0-
FreeBSD:13:armv72.4.02.4.0
FreeBSD:13:i3862.4.02.4.0
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64-2.4.0
FreeBSD:14:aarch642.4.0-
FreeBSD:14:amd642.4.0-
FreeBSD:14:armv6--
FreeBSD:14:armv72.4.0-
FreeBSD:14:i3862.4.0-
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc642.4.0-
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. pkgconf>=1.3.0_1 : devel/pkgconf
Library dependencies:
  1. libglib-2.0.so : devel/glib20
  2. libintl.so : devel/gettext-runtime
There are no ports dependent upon this port

Configuration Options:
Options name:

USES:

Master Sites:
Expand this list (1 items)
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  1. http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/
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Number of commits found: 2

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
06 Apr 2021 14:31:07
 files touched by this commit commit hash:305f148f482daf30dcf728039d03d019f88344eb  2.4.0
mat search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
13 Jul 2018 07:02:17
Original commit files touched by this commit Revision:474558  2.4.0
yuri search for other commits by this committer
New port: biology/exonerate: Generic tool for sequence alignment

PR:		229180
Submitted by:	Motomichi Matsuzaki <mzaki@niid.go.jp>

Number of commits found: 2