[ 22:01 jbeich  ]

• 512079 biology/jellyfish/Makefile
• 512079 biology/jellyfish/files/patch-include_jellyfish_file__header.hpp
• 512079 devel/jsoncpp/Makefile
• 512079 devel/llvm60/Makefile
• 512079 devel/llvm70/Makefile
• 512079 devel/llvm80/Makefile
• 512079 devel/llvm90/Makefile
• 512079 devel/qtcreator/Makefile
• 512079 devel/sdl2pp/Makefile
• 512079 dns/powerdns-recursor/Makefile

Drop C++11 workaround for GCC < 6 after r449590

lang/gcc5 will expire in ~1 month. If someone still uses lang/gcc48
they should backport C++11 fix instead. QA on GCC architecuters is
currently limited to powerpc64 which uses GCC_DEFAULT.

PR:		193528

[ 16:23 jwb  ]

• 501578 biology/jellyfish/Makefile
• 501578 biology/jellyfish/distinfo
• 501578 biology/jellyfish/files/patch-include_jellyfish_file__header.hpp
• 501578 biology/jellyfish/files/patch-include_jellyfish_hash__counter.hpp
• 501578 biology/jellyfish/files/patch-sub__commands_count__main.cc
• 501578 biology/jellyfish/files/patch-sub__commands_merge__main.cc
• 501578 biology/jellyfish/files/patch-sub__commands_query__main.cc
• 501578 biology/jellyfish/pkg-plist

biology/jellyfish: Upgrade to 2.2.10, patch for powerpc64

PR:             237868
Submitted by:   pkubaj

[ 13:53 amdmi3  ]

• 411785 biology/Makefile
• 411785 biology/jellyfish
• 411785 biology/jellyfish/Makefile
• 411785 biology/jellyfish/distinfo
• 411785 biology/jellyfish/files
• 411785 biology/jellyfish/files/patch-include_jellyfish_file__header.hpp
• 411785 biology/jellyfish/pkg-descr
• 411785 biology/jellyfish/pkg-plist

Jellyfish is a tool for fast, memory-efficient counting of k-mers in DNA.
A k-mer is a substring of length k, and counting the occurrences of all such
substrings is a central step in many analyses of DNA sequence. JELLYFISH can
count k-mers quickly by using an efficient encoding of a hash table and by
exploiting the "compare-and-swap" CPU instruction to increase parallelism.

WWW: http://www.genome.umd.edu/jellyfish.html

PR:		207929
Submitted by:	bacon4000@gmail.com