| Port details on branch 2022Q2 |
- libsbml API Library for Working with SBML File
- 5.19.0_2 biology
 =0      5.19.0_2Version of this port present on the latest quarterly branch. - Maintainer: sunpoet@FreeBSD.org
- Port Added: 2022-04-24 04:16:20
- Last Update: 2022-04-10 19:47:23
- Commit Hash: 035e778
- Also Listed In: devel
- License: LGPL21
- WWW:
- https://synonym.caltech.edu/
- Description:
- LibSBML is an open-source programming library to help you read, write,
manipulate, translate, and validate SBML files and data streams. It is
not an application itself (though it does come with example programs),
but rather a library you can embed in your own applications.
LibSBML understands all Levels and Versions of SBML, as well as the
SBML Layout proposal by Gauges, Rost, Sahle and Wegner. It's written in
ISO C and C++ but can be used from all the languages listed in the
right-hand box.
WWW: https://sbml.org/software/libsbml/
WWW: https://github.com/sbmlteam/libsbml
WWW: https://synonym.caltech.edu/
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- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - Dependency lines:
-
- libsbml>0:biology/libsbml
- To install the port:
- cd /usr/ports/biology/libsbml/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/libsbml
- pkg install libsbml
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: libsbml
- Flavors: there is no flavor information for this port.
- distinfo:
- TIMESTAMP = 1607539653
SHA256 (libSBML-5.19.0-core-src.tar.gz) = 9d2837378e77a8732588d481327bb10c721ec06dd6cd72f8041d67d3b53d4e56
SIZE (libSBML-5.19.0-core-src.tar.gz) = 14600103
No package information for this port in our database- Sometimes this happens. Not all ports have packages. Perhaps there is a build error. Check the fallout link:
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- swig : devel/swig
- cmake : devel/cmake
- ninja : devel/ninja
- python3.8 : lang/python38
- Runtime dependencies:
-
- python3.8 : lang/python38
- Library dependencies:
-
- libxml2.so : textproc/libxml2
- This port is required by:
- for Build
-
- biology/libsedml
- for Libraries
-
- biology/libnuml
- for Run
-
- biology/libsedml
Configuration Options:- ===> The following configuration options are available for libsbml-5.19.0_2:
EXAMPLES=on: Build and/or install examples
PYTHON=on: Python bindings or support
RUBY=off: Ruby bindings or support
====> XML format or parser support: you have to select exactly one of them
EXPAT=off: XML parser support via Expat
LIBXML2=on: XML parser support via libxml2
XERCES=off: XML parser support via Xerces
===> Use 'make config' to modify these settings
- Options name:
- biology_libsbml
- USES:
- cmake iconv:build pathfix gnome python:3.6+
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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