Port details on branch 2025Q2 |
- ncbi-blast+ NCBI implementation of Basic Local Alignment Search Tool
- 2.16.0_4 biology
=0 2.17.0Version of this port present on the latest quarterly branch. - Maintainer: jwb@FreeBSD.org
 - Port Added: 2025-06-20 07:19:35
- Last Update: 2025-06-20 05:38:33
- Commit Hash: 58c796d
- Also Listed In: perl5 python
- License: PD
- WWW:
- https://blast.ncbi.nlm.nih.gov/
- Description:
- The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity
between sequences. The program compares nucleotide or protein sequences to
sequence databases and calculates the statistical significance of matches.
BLAST can be used to infer functional and evolutionary relationships between
sequences as well as help identify members of gene families.
¦ ¦ ¦ ¦ 
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - USE_RC_SUBR (Service Scripts)
- no SUBR information found for this port
- Dependency lines:
-
- ncbi-blast+>0:biology/ncbi-blast+
- Conflicts:
- CONFLICTS_INSTALL:
- To install the port:
- cd /usr/ports/biology/ncbi-blast+/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/ncbi-blast+
- pkg install ncbi-blast+
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: ncbi-blast+
- Flavors: there is no flavor information for this port.
- ONLY_FOR_ARCHS: aarch64 amd64 powerpc64 powerpc64le riscv64
- distinfo:
- TIMESTAMP = 1733904135
SHA256 (ncbi-blast-2.16.0+-src.tar.gz) = 17c93cf009721023e5aecf5753f9c6a255d157561638b91b3ad7276fd6950c2b
SIZE (ncbi-blast-2.16.0+-src.tar.gz) = 28307712
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- gmake>=4.4.1 : devel/gmake
- python3.11 : lang/python311
- perl5>=5.36<5.37 : lang/perl5.36
- Test dependencies:
-
- python3.11 : lang/python311
- Runtime dependencies:
-
- p5-List-MoreUtils>=0 : lang/p5-List-MoreUtils
- p5-JSON>=0 : converters/p5-JSON
- python3.11 : lang/python311
- perl5>=5.36<5.37 : lang/perl5.36
- Library dependencies:
-
- libdw.so : devel/elfutils
- libgcrypt.so : security/libgcrypt
- libgmp.so : math/gmp
- libgnutls.so : security/gnutls
- libgpg-error.so : security/libgpg-error
- libgrpc.so : devel/grpc
- libhogweed.so : security/nettle
- libidn2.so : dns/libidn2
- liblmdb.so : databases/lmdb
- liblzo2.so : archivers/lzo2
- libnettle.so : security/nettle
- libnghttp2.so : www/libnghttp2
- libp11-kit.so : security/p11-kit
- libpcre.so : devel/pcre
- libsqlite3.so : databases/sqlite3
- libtasn1.so : security/libtasn1
- libtspi.so : security/trousers
- libuv.so : devel/libuv
- libzstd.so : archivers/zstd
- There are no ports dependent upon this port
Configuration Options:
- No options to configure
- Options name:
- biology_ncbi-blast+
- USES:
- compiler:c++14-lang gmake localbase:ldflags perl5 python shebangfix
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
Number of commits found: 1
Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
Commit | Credits | Log message |
2.16.0_4 20 Jun 2025 05:38:33
    |
Matthias Fechner (mfechner)  Author: Po-Chuan Hsieh |
devel/grpc: Update to 1.72.0
- Bump PORTREVISION of dependent ports for shlib change
Changes: https://github.com/grpc/grpc/releases
(cherry picked from commit 3ebb999ea0410eb7c5f87d3223c67fe7af9616b0) |
Number of commits found: 1
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