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Port details
ncbi-blast NCBI implementation of Basic Local Alignment Search Tool
2.2.30 biology Deleted on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. 2.2.30Version of this port present on the latest quarterly branch.
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Port Added: 2014-10-06 20:17:07
Last Update: 2014-12-30 20:03:14
SVN Revision: 375848
License: Public_domain
SVNWeb : Homepage

There is no configure plist information for this port.

Dependency lines:
  • ncbiblast>0:biology/ncbi-blast
No installation instructions: this port has been deleted.
The package name of this deleted port was: ncbiblast
PKGNAME: ncbiblast
Flavors: there is no flavor information for this port.
There is no distinfo for this port.
No package information in database for this port.

NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. gmake : devel/gmake
  2. python2.7 : lang/python27
  3. gcc48 : lang/gcc
  4. as : devel/binutils
  5. perl5.16.3 : lang/perl5.16
Runtime dependencies:
  1. python2.7 : lang/python27
  2. gcc48 : lang/gcc
  3. perl5.16.3 : lang/perl5.16
Library dependencies:
  1. : devel/pcre
  2. : archivers/bzip2
There are no ports dependent upon this port

Configuration Options
Master Sites:
Port Moves
  • port moved to biology/ncbi-blast+ on 2014-12-30
    REASON: Clarify that this is blast+ and not the blast, allow for a future ncbi-blast port

Number of commits found: 2

Commit History - (may be incomplete: see SVNWeb link above for full details)
30 Dec 2014 20:03:14
Original commit files touched by this commit  2.2.30
grembo search for other commits by this committer
Rename biology/ncbi-blast to biology/ncbi-blast+

Approved by:	mentors (implicit)
06 Oct 2014 20:16:35
Original commit files touched by this commit  2.2.30
marino search for other commits by this committer
Add new port biology/ncbi-blast

PR:		190854
Submitted by:	Jason Bacon

The Basic Local Alignment Search Tool (BLAST) finds regions of local
similarity between sequences. The program compares nucleotide or protein
sequences to sequence databases and calculates the statistical
significance of matches. BLAST can be used to infer functional and
evolutionary relationships between sequences as well as help identify
members of gene families.

Number of commits found: 2

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