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Port details
ncbi-blast NCBI implementation of Basic Local Alignment Search Tool
2.2.30 biology Deleted on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port
2.2.30Version of this port present on the latest quarterly branch.
Maintainer: jwbacon@tds.net search for ports maintained by this maintainer
Port Added: 2014-10-06 20:17:07
Last Update: 2014-12-30 20:03:14
SVN Revision: 375848
License: Public_domain
The Basic Local Alignment Search Tool (BLAST) finds regions of local
similarity between sequences. The program compares nucleotide or protein
sequences to sequence databases and calculates the statistical
significance of matches. BLAST can be used to infer functional and
evolutionary relationships between sequences as well as help identify
members of gene families.

WWW: http://blast.ncbi.nlm.nih.gov
SVNWeb : Homepage

There is no configure plist information for this port.

Dependency lines:
  • ncbiblast>0:biology/ncbi-blast

No installation instructions: this port has been deleted.

The package name of this deleted port was: ncbiblast

PKGNAME: ncbiblast

There is no flavor information for this port.

distinfo: There is no distinfo for this port.


NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.

Build dependencies:
  1. gmake : devel/gmake
  2. python2.7 : lang/python27
  3. gcc48 : lang/gcc
  4. as : devel/binutils
  5. perl5.16.3 : lang/perl5.16
Runtime dependencies:
  1. python2.7 : lang/python27
  2. gcc48 : lang/gcc
  3. perl5.16.3 : lang/perl5.16
Library dependencies:
  1. libpcre.so : devel/pcre
  2. libbz2.so : archivers/bzip2
There are no ports dependent upon this port

Configuration Options
     No options to configure

Master Sites:
  1. http://distcache.FreeBSD.org/ports-distfiles/
  2. http://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.30/
Port Moves
  • port moved to biology/ncbi-blast+ on 2014-12-30
    REASON: Clarify that this is blast+ and not the blast, allow for a future ncbi-blast port

Number of commits found: 2

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
30 Dec 2014 20:03:14
Original commit files touched by this commit  2.2.30
Revision:375848
grembo search for other commits by this committer
Rename biology/ncbi-blast to biology/ncbi-blast+

Approved by:	mentors (implicit)
06 Oct 2014 20:16:35
Original commit files touched by this commit  2.2.30
Revision:370220
marino search for other commits by this committer
Add new port biology/ncbi-blast

PR:		190854
Submitted by:	Jason Bacon

The Basic Local Alignment Search Tool (BLAST) finds regions of local
similarity between sequences. The program compares nucleotide or protein
sequences to sequence databases and calculates the statistical
significance of matches. BLAST can be used to infer functional and
evolutionary relationships between sequences as well as help identify
members of gene families.

Number of commits found: 2

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