notbugAs an Amazon Associate I earn from qualifying purchases.
Want a good read? Try FreeBSD Mastery: Jails (IT Mastery Book 15)
Port details
ncbi-cxx-toolkit NCBI C++ Toolkit
22.0.0 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 22.0.0Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2018-10-08 07:55:03
Last Update: 2021-04-07 08:09:01
Commit Hash: cf118cc
Also Listed In: devel science
License: PD
Description:
SVNWeb : git : Homepage
pkg-plist: as obtained via: make generate-plist
Expand this list (3 items)
Collapse this list.
  1. /usr/local/share/licenses/ncbi-cxx-toolkit-22.0.0/catalog.mk
  2. /usr/local/share/licenses/ncbi-cxx-toolkit-22.0.0/LICENSE
  3. /usr/local/share/licenses/ncbi-cxx-toolkit-22.0.0/PD
Collapse this list.
Dependency lines:
  • ncbi-cxx-toolkit>0:biology/ncbi-cxx-toolkit
To install the port: cd /usr/ports/biology/ncbi-cxx-toolkit/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/ncbi-cxx-toolkit
  • pkg install ncbi-cxx-toolkit
PKGNAME: ncbi-cxx-toolkit
Flavors: there is no flavor information for this port.
distinfo:
Packages (timestamps in pop-ups are UTC):
ncbi-cxx-toolkit
ABIlatestquarterly
FreeBSD:11:aarch64--
FreeBSD:11:amd6422.0.022.0.0
FreeBSD:11:armv6--
FreeBSD:11:i38622.0.022.0.0
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64--
FreeBSD:12:amd6422.0.022.0.0
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i38622.0.022.0.0
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch64--
FreeBSD:13:amd6422.0.022.0.0
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i38622.0.022.0.0
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:14:aarch64--
FreeBSD:14:amd6422.0.0-
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i38622.0.0-
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. gmake>=4.3 : devel/gmake
  2. python3.7 : lang/python37
  3. perl5>=5.32.r0<5.33 : lang/perl5.32
  4. x11.pc : x11/libX11
  5. xpm.pc : x11/libXpm
Runtime dependencies:
  1. bash : shells/bash
  2. python3.7 : lang/python37
  3. perl5>=5.32.r0<5.33 : lang/perl5.32
  4. x11.pc : x11/libX11
  5. xpm.pc : x11/libXpm
Library dependencies:
  1. liblmdb.so : databases/lmdb
  2. libpcre.so : devel/pcre
  3. libmysqlclient.so.20 : databases/mysql57-client
There are no ports dependent upon this port

Configuration Options:
Options name:

USES:

Master Sites:
Expand this list (1 items)
Collapse this list.
  1. ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/2019/Mar_28_2019/
Collapse this list.

Number of commits found: 8

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
07 Apr 2021 08:09:01
 files touched by this commit commit hash:cf118ccf875508b9a1c570044c93cfcc82bd455c  22.0.0
mat search for other commits by this committer
One more small cleanup, forgotten yesterday.
Reported by:	lwhsu
06 Apr 2021 14:31:07
 files touched by this commit commit hash:305f148f482daf30dcf728039d03d019f88344eb  22.0.0
mat search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
27 Sep 2020 04:57:44
Original commit files touched by this commit Revision:550237  22.0.0
yuri search for other commits by this committer
biology/ncbi-cxx-toolkit: Fix build on 13

Reported by:	fallout
25 Sep 2020 06:57:44
Original commit files touched by this commit Revision:549992  22.0.0
yuri search for other commits by this committer
biology/ncbi-cxx-toolkit: Update 21.0.0 -> 22.0.0
04 Nov 2019 21:08:20
Original commit files touched by this commit Revision:516742  21.0.0_2
zeising search for other commits by this committer
Add USES=xorg USES=gl, ports categories b

Add USES=xorg, USES=gl and in a few cases USES=gnome to ports in categories
starting with 'b'.
26 Jul 2019 20:46:57
Original commit files touched by this commit Revision:507372  21.0.0_2
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
12 Dec 2018 01:35:36
Original commit files touched by this commit Revision:487272  21.0.0_1
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
08 Oct 2018 07:54:49
Original commit files touched by this commit Revision:481520  21.0.0
yuri search for other commits by this committer
New port: biology/ncbi-cxx-toolkit: NCBI C++ Toolkit

Number of commits found: 8