Number of commits found XX: 21

Update *_DEPENDS

- Bump PORTREVISION for dependency change

The circular dependency among p5-Bio-Cluster, p5-Bio-DB-NCBIHelper,
p5-Bio-Variation and this port has been resolved in p5-Bio-Variation 1.7.5
update.

Install Bio::SeqIO::entrezgene

- Bump PORTREVISION for package change
- Take maintainership

Bio::SeqIO::entrezgene has been removed from BioPerl since 1.7.3.

Update to 1.73

Changes:	https://metacpan.org/changes/distribution/Bio-ASN1-EntrezGene

Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except
for where it resulted in a change in output from build-depends-list or
run-depends-list.

Approved by:	portmgr (adamw)

Fix license information for portgs that use "the same license as Perl".

Sponsored by:	Absolight

- Add LICENSE
- Add NO_ARCH
- Bump PORTREVISION for biology/p5-bioperl renaming

- Update to 1.72
Changes: http://search.cpan.org/~cjfields/Bio-ASN1-EntrezGene-1.72/

Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.

With hat:	portmgr
Sponsored by:	Absolight

Start removing MASTER_SITE_SUBDIR=CPAN:username where possible. The
downside to having this set is that portscout cannot find new releases
when the username changes (which happens often in large projects with
multiple maintainers).

Reassign biology/ perl modules to perl@.

While here:

Regenerate p5-AcePerl's patches using makepatch.
Make p5-Bio-ASN1-EntrezGene depend on p5-bioperl, instead of the
other way around. Bump PORTREVISION on those two ports.

biology/p5-Bio-ASN1-EntrezGene: bump PORTEPOCH

Apparently in some world I don't live in 1.091 > 1.70
pkg needs this port's epoch to be bumped

reported by: 	wen

biology/p5-Bio-ASN1-EntrezGene: Upgrade 1.09 => 1.70 to unbreak

While here, reset the port.  The last time the maintainer was seen was
in 2005, when the port was created.  Also, rewrap the package description
such that it keeps within 75 characters; also move the url so it won't
wrap across lines.

Mark as broken unfetchable ports

Change the way Perl modules are installed, update the default Perl to 5.18.

Before, we had:

  site_perl :           lib/perl5/site_perl/5.18
  site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
  perl_man3 :           lib/perl5/5.18/man/man3

Now we have:

  site_perl : lib/perl5/site_perl
  site_arch : lib/perl5/site_perl/mach/5.18
  perl_man3 : lib/perl5/site_perl/man/man3

Modules without any .so will be installed at the same place regardless of the

(Only the first 15 lines of the commit message are shown above )

Convert a bunch of EXTRACT_SUFX=... into USES=tar:...

Approved by:	portmgr (not really, but touches unstaged ports)

- add stage support

Approved by:	portmgr (blanket infrastructure)

Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)

- convert to the new perl5 framework

Approved by:	portmgr (bapt@, blanket)

- Take advantage of CPAN macro from bsd.sites.mk, change
${MASTER_SITE_PERL_CPAN} to CPAN.

PR:             ports/122674
Submitted by:   Philip M. Gollucci <pgollucci@p6m7g8.com>
Reworked by:    araujo (myself)
Approved by:    portmgr (pav)

Welcome bsd.perl.mk.  Add support for constructs such as USE_PERL5=5.8.0+.
Drop support for antique perl.

Work done by:   gabor
Sponsored by:   Google Summer of Code 2007
Hat:            portmgr

Add p5-Bio-ASN1-EntrezGene, a Regular expression-based Perl Parser for
NCBI Entrez Gene.

PR:             87423
Submitted by:   Mauricio Herrera Cuadra <mauricio@arareko.net>
Approved by:    novel (mentor) (implicit)

Number of commits found XX: 21

19 vulnerabilities affecting 148 ports have been reported in the past 14 days

^* - modified, not new

All vulnerabilities

Last updated:
2020-07-11 12:42:41