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Port details
py-gtfparse Parsing tools for GTF (gene transfer format) files
1.2.1 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 1.2.1Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2018-10-19 02:03:55
Last Update: 2021-04-07 08:09:01
Commit Hash: cf118cc
Also Listed In: python
License: APACHE20
Description:
SVNWeb : git : Homepage
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • ${PYTHON_PKGNAMEPREFIX}gtfparse>0:biology/py-gtfparse@${PY_FLAVOR}
To install the port: cd /usr/ports/biology/py-gtfparse/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/py-gtfparse
  • pkg install py38-gtfparse
NOTE: This is a Python port. Instead of py38-gtfparse listed in the above command, you can pick from the names under the Packages section.
PKGNAME: py38-gtfparse
Package flavors (<flavor>: <package>)
  • py38: py38-gtfparse
distinfo:
Packages (timestamps in pop-ups are UTC):
py27-gtfparse
ABIlatestquarterly
FreeBSD:11:aarch64-1.2.0_2
FreeBSD:11:amd64--
FreeBSD:11:armv6--
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64--
FreeBSD:12:amd64--
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i386--
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch64--
FreeBSD:13:amd64--
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i386--
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:14:aarch64--
FreeBSD:14:amd64--
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i386--
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
 
py37-gtfparse
ABIlatestquarterly
FreeBSD:11:aarch64-1.2.0_2
FreeBSD:11:amd64--
FreeBSD:11:armv6--
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64--
FreeBSD:12:amd64--
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i386--
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch641.2.1-
FreeBSD:13:amd64--
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i386--
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:14:aarch64--
FreeBSD:14:amd64--
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i386--
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc641.2.1-
 
py38-gtfparse
ABIlatestquarterly
FreeBSD:11:aarch64--
FreeBSD:11:amd641.2.11.2.1
FreeBSD:11:armv6--
FreeBSD:11:i3861.2.11.2.1
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64-1.2.1
FreeBSD:12:amd641.2.11.2.1
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i3861.2.11.2.1
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch64-1.2.1
FreeBSD:13:amd641.2.11.2.1
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i3861.2.11.2.1
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:14:aarch641.2.1-
FreeBSD:14:amd641.2.1-
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i3861.2.1-
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py38-setuptools>0 : devel/py-setuptools@py38
  2. python3.8 : lang/python38
Runtime dependencies:
  1. py38-numpy>=1.16,1<1.20,1 : math/py-numpy@py38
  2. py38-pandas>=0.15 : math/py-pandas@py38
  3. py38-setuptools>0 : devel/py-setuptools@py38
  4. python3.8 : lang/python38
There are no ports dependent upon this port

Configuration Options:
Options name:

USES:

FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (2 items)
Collapse this list.
  1. https://files.pythonhosted.org/packages/source/g/gtfparse/
  2. https://pypi.org/packages/source/g/gtfparse/
Collapse this list.

Number of commits found: 8

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
07 Apr 2021 08:09:01
 files touched by this commit commit hash:cf118ccf875508b9a1c570044c93cfcc82bd455c  1.2.1
mat search for other commits by this committer
One more small cleanup, forgotten yesterday.
Reported by:	lwhsu
06 Apr 2021 14:31:07
 files touched by this commit commit hash:305f148f482daf30dcf728039d03d019f88344eb  1.2.1
mat search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
30 Jan 2021 13:29:58
Original commit files touched by this commit Revision:563407  1.2.1
sunpoet search for other commits by this committer
Update USES=python: math/py-pandas 1.2.0 requires Python 3.7+

PR:		250103
28 Dec 2020 23:02:15
Original commit files touched by this commit Revision:559531  1.2.1
antoine search for other commits by this committer
Drop python 2.7 support from a few ports

With hat:	portmgr
07 Aug 2020 04:13:00
Original commit files touched by this commit Revision:544312  1.2.1
yuri search for other commits by this committer
biology/py-gtfparse: Update 1.2.0 -> 1.2.1

Reported by:	portscout
26 Jul 2019 20:46:57
Original commit files touched by this commit Revision:507372  1.2.0_2
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
12 Dec 2018 01:35:36
Original commit files touched by this commit Revision:487272  1.2.0_1
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
19 Oct 2018 02:03:40
Original commit files touched by this commit Revision:482398  1.2.0
yuri search for other commits by this committer
New port: biology/py-gtfparse: Parsing tools for GTF (gene transfer format)
files

Number of commits found: 8