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Port details
py-pybigwig Python access to bigWig files using libBigWig
0.3.18 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout Version of this port present on the latest quarterly branch.
Maintainer: jwb@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2021-10-13 13:09:05
Last Update: 2021-10-13 21:21:32
Commit Hash: ad5a060
Also Listed In: python
License: MIT
Description:
SVNWeb : git : Homepage
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • ${PYTHON_PKGNAMEPREFIX}pyBigWig>0:biology/py-pybigwig@${PY_FLAVOR}
To install the port: cd /usr/ports/biology/py-pybigwig/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/py-pybigwig
  • pkg install py38-pyBigWig
NOTE: This is a Python port. Instead of py38-pyBigWig listed in the above command, you can pick from the names under the Packages section.
PKGNAME: py38-pyBigWig
Package flavors (<flavor>: <package>)
  • py38: py38-pyBigWig
distinfo:
Packages (timestamps in pop-ups are UTC):
py38-pyBigWig
ABIlatestquarterly
FreeBSD:11:aarch64--
FreeBSD:11:amd64--
FreeBSD:11:armv6--
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64--
FreeBSD:12:amd640.3.18-
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i3860.3.18-
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch64--
FreeBSD:13:amd640.3.18-
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i3860.3.18-
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:14:aarch64--
FreeBSD:14:amd640.3.18-
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i3860.3.18-
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py38-setuptools>0 : devel/py-setuptools@py38
  2. python3.8 : lang/python38
Runtime dependencies:
  1. py38-setuptools>0 : devel/py-setuptools@py38
  2. python3.8 : lang/python38
Library dependencies:
  1. libcurl.so : ftp/curl
This port is required by:
for Run
  1. biology/py-crossmap
  2. biology/py-deeptools

Configuration Options:
Options name:

USES:

FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (2 items)
Collapse this list.
  1. https://files.pythonhosted.org/packages/source/p/pyBigWig/
  2. https://pypi.org/packages/source/p/pyBigWig/
Collapse this list.

Number of commits found: 5

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
13 Oct 2021 21:21:32
 files touched by this commit commit hash:ad5a0604c41c81a053224fc6eb949d9390ac0627  0.3.18
jwb search for other commits by this committer
biology/py-bigwig: Rename to biology/py-pybigwig

Fully match upstream name
13 Oct 2021 18:57:58
 files touched by this commit commit hash:6a226290f3c82253f50151496168e5d1d1bb13c0  0.3.18_1
antoine search for other commits by this committer
biology/py-pybigwig: remove, duplicate of biology/py-bigwig
13 Oct 2021 16:02:12
 files touched by this commit commit hash:c69e97e63ac3e13459149271dc034ce7b0fdcf35  0.3.18_1
jwb search for other commits by this committer
biology/py-pybigwig: Fix poudriere build

Typo in post-install
13 Oct 2021 16:02:12
 files touched by this commit commit hash:646f3fc38189ac3bd4d764b366a3e685b46775da  0.3.18_1
jwb search for other commits by this committer
biology/py-py-pybigwig: Patch out setup.py warning

Neglected to add this file during previous commit
13 Oct 2021 13:03:21
 files touched by this commit commit hash:904a889fd144ce50db4d97a702861aea89fe2e94  0.3.18
jwb search for other commits by this committer
biology/py-pybigwig: Python access to bigWig files using libBigWig

py-bigwig is a python extension, written in C, for quick access to
bigBed files and access to and creation of bigWig files. This extension
uses libBigWig for local and remote file access.

Number of commits found: 5