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Port details
python-nexus Generic nexus file format reader for python
1.63 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 1.63Version of this port present on the latest quarterly branch.
Maintainer: wen@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2009-12-29 13:39:49
Last Update: 2021-04-06 14:31:07
Commit Hash: 305f148
Also Listed In: python
License: BSD3CLAUSE
Description:
SVNWeb : git : Homepage
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • ${PYTHON_PKGNAMEPREFIX}python-nexus>0:biology/python-nexus@${PY_FLAVOR}
To install the port: cd /usr/ports/biology/python-nexus/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/python-nexus
  • pkg install py38-python-nexus
NOTE: This is a Python port. Instead of py38-python-nexus listed in the above command, you can pick from the names under the Packages section.
PKGNAME: py38-python-nexus
Package flavors (<flavor>: <package>)
  • py38: py38-python-nexus
distinfo:
Packages (timestamps in pop-ups are UTC):
py27-python-nexus
ABIlatestquarterly
FreeBSD:11:aarch641.631.63
FreeBSD:11:amd64--
FreeBSD:11:armv6-1.63
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips64-1.63
FreeBSD:12:aarch641.63-
FreeBSD:12:amd64--
FreeBSD:12:armv61.631.63
FreeBSD:12:armv71.631.63
FreeBSD:12:i386--
FreeBSD:12:mips--
FreeBSD:12:mips641.631.63
FreeBSD:12:powerpc64--
FreeBSD:13:aarch64--
FreeBSD:13:amd64--
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i386--
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:14:aarch64--
FreeBSD:14:amd64--
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i386--
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
 
py36-python-nexus
ABIlatestquarterly
FreeBSD:11:aarch641.63-
FreeBSD:11:amd64--
FreeBSD:11:armv6--
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch641.63-
FreeBSD:12:amd64--
FreeBSD:12:armv61.63-
FreeBSD:12:armv71.63-
FreeBSD:12:i386--
FreeBSD:12:mips--
FreeBSD:12:mips641.63-
FreeBSD:12:powerpc64--
FreeBSD:13:aarch64--
FreeBSD:13:amd64--
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i386--
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:14:aarch64--
FreeBSD:14:amd64--
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i386--
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
 
py37-python-nexus
ABIlatestquarterly
FreeBSD:11:aarch64-1.63
FreeBSD:11:amd64--
FreeBSD:11:armv6-1.63
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips64-1.63
FreeBSD:12:aarch64--
FreeBSD:12:amd64--
FreeBSD:12:armv6-1.63
FreeBSD:12:armv7-1.63
FreeBSD:12:i386--
FreeBSD:12:mips--
FreeBSD:12:mips64-1.63
FreeBSD:12:powerpc64-1.63
FreeBSD:13:aarch641.63-
FreeBSD:13:amd64--
FreeBSD:13:armv61.631.63
FreeBSD:13:armv71.631.63
FreeBSD:13:i386--
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc641.63-
FreeBSD:14:aarch64--
FreeBSD:14:amd64--
FreeBSD:14:armv61.63-
FreeBSD:14:armv71.63-
FreeBSD:14:i386--
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc641.63-
 
py38-python-nexus
ABIlatestquarterly
FreeBSD:11:aarch64--
FreeBSD:11:amd641.631.63
FreeBSD:11:armv6--
FreeBSD:11:i3861.631.63
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64-1.63
FreeBSD:12:amd641.631.63
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i3861.631.63
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch64-1.63
FreeBSD:13:amd641.631.63
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i3861.631.63
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64-1.63
FreeBSD:14:aarch641.63-
FreeBSD:14:amd641.63-
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i3861.63-
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
 
python-nexus
ABIlatestquarterly
FreeBSD:11:aarch64--
FreeBSD:11:amd64--
FreeBSD:11:armv61.35-
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips641.35-
FreeBSD:12:aarch64--
FreeBSD:12:amd64--
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i386--
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch64--
FreeBSD:13:amd64--
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i386--
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:14:aarch64--
FreeBSD:14:amd64--
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i386--
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py38-setuptools>0 : devel/py-setuptools@py38
  2. python3.8 : lang/python38
Runtime dependencies:
  1. py38-setuptools>0 : devel/py-setuptools@py38
  2. python3.8 : lang/python38
There are no ports dependent upon this port

Configuration Options:
Options name:

USES:

FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (2 items)
Collapse this list.
  1. https://files.pythonhosted.org/packages/source/p/python-nexus/
  2. https://pypi.org/packages/source/p/python-nexus/
Collapse this list.

Number of commits found: 19

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
06 Apr 2021 14:31:07
 files touched by this commit commit hash:305f148f482daf30dcf728039d03d019f88344eb  1.63
mat search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
28 Dec 2020 23:02:15
Original commit files touched by this commit Revision:559531  1.63
antoine search for other commits by this committer
Drop python 2.7 support from a few ports

With hat:	portmgr
22 Sep 2018 08:54:58
Original commit files touched by this commit Revision:480370  1.63
wen search for other commits by this committer
- Update to 1.63
01 Apr 2018 11:52:08
Original commit files touched by this commit Revision:466142  1.61
wen search for other commits by this committer
- Update to 1.61
30 Nov 2017 15:50:34
Original commit files touched by this commit Revision:455210  1.53  Sanity Test Failure
mat search for other commits by this committer
Convert Python ports to FLAVORS.

  Ports using USE_PYTHON=distutils are now flavored.  They will
  automatically get flavors (py27, py34, py35, py36) depending on what
  versions they support.

  There is also a USE_PYTHON=flavors for ports that do not use distutils
  but need FLAVORS to be set.  A USE_PYTHON=noflavors can be set if
  using distutils but flavors are not wanted.

  A new USE_PYTHON=optsuffix that will add PYTHON_PKGNAMESUFFIX has been
  added to cope with Python ports that did not have the Python
  PKGNAMEPREFIX but are flavored.

  USES=python now also exports a PY_FLAVOR variable that contains the
(Only the first 15 lines of the commit message are shown above View all of this commit message)
23 Jul 2017 08:15:08
Original commit files touched by this commit Revision:446458  1.53
wen search for other commits by this committer
- Update to 1.53
01 Mar 2017 07:00:37
Original commit files touched by this commit Revision:435123  1.42
wen search for other commits by this committer
- Update to 1.42
08 Jun 2016 07:39:05
Original commit files touched by this commit Revision:416534  1.35
wen search for other commits by this committer
- Update to 1.35
19 May 2016 10:21:25
Original commit files touched by this commit Revision:415498  1.34
amdmi3 search for other commits by this committer
- Fix trailing whitespace in pkg-descrs, categories [a-f]*

Approved by:	portmgr blanket
12 Feb 2016 13:18:37
Original commit files touched by this commit Revision:408731  1.34
wen search for other commits by this committer
- Update to 1.34
11 Dec 2015 00:59:40
Original commit files touched by this commit Revision:403479  1.32
wen search for other commits by this committer
- Update to 1.32
- Add LICENSE
- Pet portlint
19 Oct 2014 07:38:12
Original commit files touched by this commit Revision:371171  0.87_1
mva search for other commits by this committer
- Convert ports from benchmarks/ and biology/ to new USES=python

Approved by:	portmgr (implicit)
09 Jun 2014 11:21:53
Original commit files touched by this commit Revision:357139  0.87_1
olgeni search for other commits by this committer
Remove indefinite articles and trailing periods from COMMENT, plus
minor COMMENT typos and surrounding whitespace fixes. Categories A-C.

CR:		D196
Approved by:	portmgr (bapt)
31 Jan 2014 12:30:39
Original commit files touched by this commit Revision:341983  0.87_1
miwi search for other commits by this committer
- Convert to PYDISTUTILS_AUTOPLIST
- Stage support
- Bump PORTREV
20 Sep 2013 15:55:44
Original commit files touched by this commit Revision:327709  0.87
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
23 Dec 2011 08:05:00
Original commit files touched by this commit   0.87
wen search for other commits by this committer
- Update to 0.87
15 Feb 2011 01:59:12
Original commit files touched by this commit   0.8
wen search for other commits by this committer
- Update to 0.8
24 Feb 2010 01:30:47
Original commit files touched by this commit   0.7
wen search for other commits by this committer
- Update to 0.7

Feature safe:   yes
29 Dec 2009 13:39:14
Original commit files touched by this commit   0.6d
wen search for other commits by this committer
python-nexus is a generic nexus (phylogenetics) file format(.nex, .trees)
reader for python.

WWW:    http://simon.net.nz/articles/python-nexus

Number of commits found: 19