notbugAs an Amazon Associate I earn from qualifying purchases.
Want a good read? Try FreeBSD Mastery: Jails (IT Mastery Book 15)
Port details
recombine Program to fit population models across sites
1.41_2 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port 1.41Version of this port present on the latest quarterly branch.
There is no maintainer for this port.
Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org
search for ports maintained by this maintainer
Port Added: 2001-08-06 11:49:53
Last Update: 2019-09-02 06:00:43
SVN Revision: 510754
License: not specified in port
Description:
SVNWeb : Homepage
pkg-plist: as obtained via: make generate-plist
Expand this list (2 items)
  1. bin/filetran
  2. bin/recombine
Collapse this list.
Dependency lines:
  • recombine>0:biology/recombine
To install the port: cd /usr/ports/biology/recombine/ && make install clean
To add the package: pkg install recombine
PKGNAME: recombine
Flavors: there is no flavor information for this port.
distinfo:

There are no ports dependent upon this port

Configuration Options

USES:

Master Sites:
  1. http://evolution.gs.washington.edu/lamarc/recombine/

Number of commits found: 16

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
02 Sep 2019 05:00:43
Original commit files touched by this commit  1.41_2
Revision:510754
cy search for other commits by this committer
Fix after gets(3) retirement using gets_s(3).

Bump PORTREVISION as this is a security issue too.

PR:		222796
MFH:		2019Q3
01 Sep 2019 16:40:06
Original commit files touched by this commit  1.41_1
Revision:510707
lwhsu search for other commits by this committer
Add a patch to remove use of gets(3)

PR:		238685
Submitted by:	Walter Schwarzenfeld <w.schwarzenfeld@utanet.at>
Reported by:	emaste
Sponsored by:	The FreeBSD Foundation
19 Jul 2016 11:04:14
Original commit files touched by this commit  1.41
Revision:418767
mat search for other commits by this committer
When there is a do-install target, do not use a post-install target, do
everything at once.  Sometime, rename post-install into a options helper
target.

I did not fix ports that were such a mess that I could not figure out
what they really wanted to do.  I also did not change ports that had
some version of an auto-plist code in post-install, for the same reason.

With hat:	portmgr
Sponsored by:	Absolight
16 Feb 2014 11:39:42
Original commit files touched by this commit  1.41
Revision:344537
ehaupt search for other commits by this committer
- Support staging
- Use shebangfix
20 Sep 2013 15:55:44
Original commit files touched by this commit  1.41
Revision:327709
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
19 Jun 2013 19:15:14
Original commit files touched by this commit  1.41
Revision:321313
bsam search for other commits by this committer
. NOPORTDOCS -> PORT_OPTIONS:MDOCS;
. mute mkdir;
. use PLIST_FILES and PORTDOCS at Makefile;
. remove pkg-plist;
. trim Makefile headers;
. remove article from COMMENT;
. pet portlint -- use opne space after WWW: at pkg-descr.
19 Mar 2011 12:38:54
Original commit files touched by this commit  1.41

miwi search for other commits by this committer
- Get Rid MD5 support
21 Dec 2009 02:19:12
Original commit files touched by this commit  1.41

dougb search for other commits by this committer
For ports maintained by ports@FreeBSD.org, remove names and/or
e-mail addresses from the pkg-descr file that could reasonably
be mistaken for maintainer contact information in order to avoid
confusion on the part of users looking for support. As a pleasant
side effect this also avoids confusion and/or frustration for people
who are no longer maintaining those ports.
25 Jan 2007 12:22:50
Original commit files touched by this commit  1.41

vd search for other commits by this committer
Fix master sites, un-deprecate and update biology/recombine to 1.41.
10 Dec 2006 12:36:15
Original commit files touched by this commit  1.40

gabor search for other commits by this committer
- Deprecate
- Set EXPIRATION_DATE

Approved by:    erwin (mentor)
24 Nov 2005 00:04:00
Original commit files touched by this commit  1.40

pav search for other commits by this committer
- Add SHA256
20 Nov 2004 08:09:49
Original commit files touched by this commit  1.40

linimon search for other commits by this committer
With portmgr hat on, reset inactive maintainer.  These ports are now up
for adoption.
31 Mar 2004 03:12:58
Original commit files touched by this commit  1.40

trevor search for other commits by this committer
SIZEify (maintainer timeout)
22 Oct 2003 09:29:55
Original commit files touched by this commit  1.40

osa search for other commits by this committer
Cosmetic fix: use %%DOCSDIR%% macro.
No functionally changes.

Submitted by:   Oleg Karachevtsev <ok@etrust.ru>
A part of PR:   57992
07 Mar 2003 05:56:43
Original commit files touched by this commit  1.40

ade search for other commits by this committer
Clear moonlight beckons.
Requiem mors pacem pkg-comment,
And be calm ports tree.

E Nomini Patri, E Fili, E Spiritu Sancti.
06 Aug 2001 15:49:53
Original commit files touched by this commit

wjv search for other commits by this committer
Add recombine 1.40, a program to fit population models across sites.    

Number of commits found: 16

Login
User Login
Create account

Servers and bandwidth provided by
New York Internet, iXsystems, and RootBSD

This site
What is FreshPorts?
About the authors
Issues
FAQ
How big is it?
The latest upgrade!
Privacy
Forums
Blog
Contact

Search
Enter Keywords:
 
more...

Latest Vulnerabilities
chromiumNov 12
wordpressNov 12
wordpressNov 12
wordpressNov 12
wordpressNov 12
wordpressNov 12
nexus2-ossNov 07
php71Nov 06
php72Nov 06
php73Nov 06
php74Nov 06
fileNov 02
mariadb101-serverNov 02
mariadb102-serverNov 02
mariadb103-serverNov 02

10 vulnerabilities affecting 191 ports have been reported in the past 14 days

* - modified, not new

All vulnerabilities

Last updated:
2019-11-12 21:39:02


Ports
Home
Categories
Deleted ports
Sanity Test Failures
Newsfeeds

Statistics
Graphs
NEW Graphs (Javascript)
Traffic

Calculated hourly:
Port count 38042
Broken 789
Deprecated 84
Ignore 1069
Forbidden 3
Restricted 156
No CDROM 72
Vulnerable 33
Expired 7
Set to expire 54
Interactive 0
new 24 hours 0
new 48 hours4
new 7 days26
new fortnight55
new month113

Servers and bandwidth provided by
New York Internet, iXsystems, and RootBSD
Valid HTML, CSS, and RSS.
Copyright © 2000-2019 Dan Langille. All rights reserved.