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Port details
seqan3 C++ header-only library for biological sequence analysis
3.0.3 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 3.0.3Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2021-05-12 01:24:05
Last Update: 2021-08-13 17:08:56
Commit Hash: cea0bdfd
Also Listed In: devel math
License: BSD3CLAUSE
Description:
SVNWeb : git : Homepage
pkg-plist: as obtained via: make generate-plist
Expand this list (690 items)
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  1. /usr/local/share/licenses/seqan3-3.0.3/catalog.mk
  2. /usr/local/share/licenses/seqan3-3.0.3/LICENSE
  3. /usr/local/share/licenses/seqan3-3.0.3/BSD3CLAUSE
  4. include/seqan3/alignment/aligned_sequence/aligned_sequence_concept.hpp
  5. include/seqan3/alignment/aligned_sequence/all.hpp
  6. include/seqan3/alignment/aligned_sequence/debug_stream_alignment.hpp
  7. include/seqan3/alignment/all.hpp
  8. include/seqan3/alignment/band/all.hpp
  9. include/seqan3/alignment/band/static_band.hpp
  10. include/seqan3/alignment/configuration/align_config_band.hpp
  11. include/seqan3/alignment/configuration/align_config_debug.hpp
  12. include/seqan3/alignment/configuration/align_config_edit.hpp
  13. include/seqan3/alignment/configuration/align_config_gap_cost_affine.hpp
  14. include/seqan3/alignment/configuration/align_config_method.hpp
  15. include/seqan3/alignment/configuration/align_config_min_score.hpp
  16. include/seqan3/alignment/configuration/align_config_on_result.hpp
  17. include/seqan3/alignment/configuration/align_config_output.hpp
  18. include/seqan3/alignment/configuration/align_config_parallel.hpp
  19. include/seqan3/alignment/configuration/align_config_result_type.hpp
  20. include/seqan3/alignment/configuration/align_config_score_type.hpp
  21. include/seqan3/alignment/configuration/align_config_scoring_scheme.hpp
  22. include/seqan3/alignment/configuration/align_config_vectorised.hpp
  23. include/seqan3/alignment/configuration/all.hpp
  24. include/seqan3/alignment/configuration/detail.hpp
  25. include/seqan3/alignment/decorator/gap_decorator.hpp
  26. include/seqan3/alignment/detail/pairwise_alignment_concept.hpp
  27. include/seqan3/alignment/exception.hpp
  28. include/seqan3/alignment/matrix/alignment_coordinate.hpp
  29. include/seqan3/alignment/matrix/alignment_optimum.hpp
  30. include/seqan3/alignment/matrix/all.hpp
  31. include/seqan3/alignment/matrix/debug_matrix.hpp
  32. include/seqan3/alignment/matrix/detail/advanceable_alignment_coordinate.hpp
  33. include/seqan3/alignment/matrix/detail/affine_cell_proxy.hpp
  34. include/seqan3/alignment/matrix/detail/aligned_sequence_builder.hpp
  35. include/seqan3/alignment/matrix/detail/alignment_matrix_column_major_range_base.hpp
  36. include/seqan3/alignment/matrix/detail/alignment_score_matrix_one_column.hpp
  37. include/seqan3/alignment/matrix/detail/alignment_score_matrix_one_column_banded.hpp
  38. include/seqan3/alignment/matrix/detail/alignment_score_matrix_one_column_base.hpp
  39. include/seqan3/alignment/matrix/detail/alignment_score_matrix_proxy.hpp
  40. include/seqan3/alignment/matrix/detail/alignment_trace_matrix_base.hpp
  41. include/seqan3/alignment/matrix/detail/alignment_trace_matrix_full.hpp
  42. include/seqan3/alignment/matrix/detail/alignment_trace_matrix_full_banded.hpp
  43. include/seqan3/alignment/matrix/detail/alignment_trace_matrix_proxy.hpp
  44. include/seqan3/alignment/matrix/detail/all.hpp
  45. include/seqan3/alignment/matrix/detail/combined_score_and_trace_matrix.hpp
  46. include/seqan3/alignment/matrix/detail/coordinate_matrix.hpp
  47. include/seqan3/alignment/matrix/detail/matrix_coordinate.hpp
  48. include/seqan3/alignment/matrix/detail/score_matrix_single_column.hpp
  49. include/seqan3/alignment/matrix/detail/trace_iterator.hpp
  50. include/seqan3/alignment/matrix/detail/trace_iterator_banded.hpp
  51. include/seqan3/alignment/matrix/detail/trace_iterator_base.hpp
  52. include/seqan3/alignment/matrix/detail/trace_matrix_full.hpp
  53. include/seqan3/alignment/matrix/detail/two_dimensional_matrix.hpp
  54. include/seqan3/alignment/matrix/detail/two_dimensional_matrix_iterator_base.hpp
  55. include/seqan3/alignment/matrix/detail/two_dimensional_matrix_iterator_concept.hpp
  56. include/seqan3/alignment/matrix/edit_distance_score_matrix_full.hpp
  57. include/seqan3/alignment/matrix/edit_distance_trace_matrix_full.hpp
  58. include/seqan3/alignment/matrix/matrix_concept.hpp
  59. include/seqan3/alignment/matrix/row_wise_matrix.hpp
  60. include/seqan3/alignment/matrix/trace_directions.hpp
  61. include/seqan3/alignment/pairwise/align_pairwise.hpp
  62. include/seqan3/alignment/pairwise/align_result_selector.hpp
  63. include/seqan3/alignment/pairwise/alignment_algorithm.hpp
  64. include/seqan3/alignment/pairwise/alignment_configurator.hpp
  65. include/seqan3/alignment/pairwise/alignment_result.hpp
  66. include/seqan3/alignment/pairwise/all.hpp
  67. include/seqan3/alignment/pairwise/detail/alignment_algorithm_state.hpp
  68. include/seqan3/alignment/pairwise/detail/concept.hpp
  69. include/seqan3/alignment/pairwise/detail/pairwise_alignment_algorithm.hpp
  70. include/seqan3/alignment/pairwise/detail/pairwise_alignment_algorithm_banded.hpp
  71. include/seqan3/alignment/pairwise/detail/policy_affine_gap_recursion.hpp
  72. include/seqan3/alignment/pairwise/detail/policy_affine_gap_recursion_banded.hpp
  73. include/seqan3/alignment/pairwise/detail/policy_affine_gap_with_trace_recursion.hpp
  74. include/seqan3/alignment/pairwise/detail/policy_affine_gap_with_trace_recursion_banded.hpp
  75. include/seqan3/alignment/pairwise/detail/policy_alignment_matrix.hpp
  76. include/seqan3/alignment/pairwise/detail/policy_alignment_result_builder.hpp
  77. include/seqan3/alignment/pairwise/detail/policy_optimum_tracker.hpp
  78. include/seqan3/alignment/pairwise/detail/policy_optimum_tracker_simd.hpp
  79. include/seqan3/alignment/pairwise/detail/policy_scoring_scheme.hpp
  80. include/seqan3/alignment/pairwise/detail/type_traits.hpp
  81. include/seqan3/alignment/pairwise/edit_distance_algorithm.hpp
  82. include/seqan3/alignment/pairwise/edit_distance_fwd.hpp
  83. include/seqan3/alignment/pairwise/edit_distance_unbanded.hpp
  84. include/seqan3/alignment/pairwise/policy/affine_gap_init_policy.hpp
  85. include/seqan3/alignment/pairwise/policy/affine_gap_policy.hpp
  86. include/seqan3/alignment/pairwise/policy/alignment_matrix_policy.hpp
  87. include/seqan3/alignment/pairwise/policy/all.hpp
  88. include/seqan3/alignment/pairwise/policy/find_optimum_policy.hpp
  89. include/seqan3/alignment/pairwise/policy/scoring_scheme_policy.hpp
  90. include/seqan3/alignment/pairwise/policy/simd_affine_gap_policy.hpp
  91. include/seqan3/alignment/pairwise/policy/simd_find_optimum_policy.hpp
  92. include/seqan3/alignment/scoring/all.hpp
  93. include/seqan3/alignment/scoring/aminoacid_scoring_scheme.hpp
  94. include/seqan3/alignment/scoring/detail/simd_match_mismatch_scoring_scheme.hpp
  95. include/seqan3/alignment/scoring/detail/simd_matrix_scoring_scheme.hpp
  96. include/seqan3/alignment/scoring/gap_scheme.hpp
  97. include/seqan3/alignment/scoring/nucleotide_scoring_scheme.hpp
  98. include/seqan3/alignment/scoring/scoring_scheme_base.hpp
  99. include/seqan3/alignment/scoring/scoring_scheme_concept.hpp
  100. include/seqan3/alphabet/adaptation/all.hpp
  101. include/seqan3/alphabet/adaptation/char.hpp
  102. include/seqan3/alphabet/adaptation/uint.hpp
  103. include/seqan3/alphabet/all.hpp
  104. include/seqan3/alphabet/alphabet_base.hpp
  105. include/seqan3/alphabet/aminoacid/aa10li.hpp
  106. include/seqan3/alphabet/aminoacid/aa10murphy.hpp
  107. include/seqan3/alphabet/aminoacid/aa20.hpp
  108. include/seqan3/alphabet/aminoacid/aa27.hpp
  109. include/seqan3/alphabet/aminoacid/all.hpp
  110. include/seqan3/alphabet/aminoacid/aminoacid_base.hpp
  111. include/seqan3/alphabet/aminoacid/concept.hpp
  112. include/seqan3/alphabet/aminoacid/translation.hpp
  113. include/seqan3/alphabet/aminoacid/translation_details.hpp
  114. include/seqan3/alphabet/aminoacid/translation_genetic_code.hpp
  115. include/seqan3/alphabet/cigar/all.hpp
  116. include/seqan3/alphabet/cigar/cigar.hpp
  117. include/seqan3/alphabet/cigar/cigar_op.hpp
  118. include/seqan3/alphabet/cigar/exposition_only/cigar_operation.hpp
  119. include/seqan3/alphabet/composite/all.hpp
  120. include/seqan3/alphabet/composite/alphabet_tuple_base.hpp
  121. include/seqan3/alphabet/composite/alphabet_variant.hpp
  122. include/seqan3/alphabet/composite/detail.hpp
  123. include/seqan3/alphabet/composite/semialphabet_any.hpp
  124. include/seqan3/alphabet/concept.hpp
  125. include/seqan3/alphabet/container/bitpacked_sequence.hpp
  126. include/seqan3/alphabet/container/concatenated_sequences.hpp
  127. include/seqan3/alphabet/detail/alphabet_proxy.hpp
  128. include/seqan3/alphabet/detail/convert.hpp
  129. include/seqan3/alphabet/detail/debug_stream_alphabet.hpp
  130. include/seqan3/alphabet/exception.hpp
  131. include/seqan3/alphabet/gap/all.hpp
  132. include/seqan3/alphabet/gap/gap.hpp
  133. include/seqan3/alphabet/gap/gapped.hpp
  134. include/seqan3/alphabet/hash.hpp
  135. include/seqan3/alphabet/mask/all.hpp
  136. include/seqan3/alphabet/mask/mask.hpp
  137. include/seqan3/alphabet/mask/masked.hpp
  138. include/seqan3/alphabet/nucleotide/all.hpp
  139. include/seqan3/alphabet/nucleotide/concept.hpp
  140. include/seqan3/alphabet/nucleotide/dna15.hpp
  141. include/seqan3/alphabet/nucleotide/dna16sam.hpp
  142. include/seqan3/alphabet/nucleotide/dna3bs.hpp
  143. include/seqan3/alphabet/nucleotide/dna4.hpp
  144. include/seqan3/alphabet/nucleotide/dna5.hpp
  145. include/seqan3/alphabet/nucleotide/nucleotide_base.hpp
  146. include/seqan3/alphabet/nucleotide/rna15.hpp
  147. include/seqan3/alphabet/nucleotide/rna4.hpp
  148. include/seqan3/alphabet/nucleotide/rna5.hpp
  149. include/seqan3/alphabet/nucleotide/sam_dna16.hpp
  150. include/seqan3/alphabet/quality/aliases.hpp
  151. include/seqan3/alphabet/quality/all.hpp
  152. include/seqan3/alphabet/quality/concept.hpp
  153. include/seqan3/alphabet/quality/phred42.hpp
  154. include/seqan3/alphabet/quality/phred63.hpp
  155. include/seqan3/alphabet/quality/phred68legacy.hpp
  156. include/seqan3/alphabet/quality/phred68solexa.hpp
  157. include/seqan3/alphabet/quality/phred94.hpp
  158. include/seqan3/alphabet/quality/phred_base.hpp
  159. include/seqan3/alphabet/quality/qualified.hpp
  160. include/seqan3/alphabet/quality/quality_base.hpp
  161. include/seqan3/alphabet/range/hash.hpp
  162. include/seqan3/alphabet/range/sequence.hpp
  163. include/seqan3/alphabet/structure/all.hpp
  164. include/seqan3/alphabet/structure/concept.hpp
  165. include/seqan3/alphabet/structure/dot_bracket3.hpp
  166. include/seqan3/alphabet/structure/dssp9.hpp
  167. include/seqan3/alphabet/structure/structured_aa.hpp
  168. include/seqan3/alphabet/structure/structured_rna.hpp
  169. include/seqan3/alphabet/structure/wuss.hpp
  170. include/seqan3/alphabet/views/all.hpp
  171. include/seqan3/alphabet/views/char_to.hpp
  172. include/seqan3/alphabet/views/complement.hpp
  173. include/seqan3/alphabet/views/rank_to.hpp
  174. include/seqan3/alphabet/views/to_char.hpp
  175. include/seqan3/alphabet/views/to_rank.hpp
  176. include/seqan3/alphabet/views/translate.hpp
  177. include/seqan3/alphabet/views/translate_join.hpp
  178. include/seqan3/alphabet/views/trim_quality.hpp
  179. include/seqan3/argument_parser/all.hpp
  180. include/seqan3/argument_parser/argument_parser.hpp
  181. include/seqan3/argument_parser/auxiliary.hpp
  182. include/seqan3/argument_parser/detail/format_base.hpp
  183. include/seqan3/argument_parser/detail/format_help.hpp
  184. include/seqan3/argument_parser/detail/format_html.hpp
  185. include/seqan3/argument_parser/detail/format_man.hpp
  186. include/seqan3/argument_parser/detail/format_parse.hpp
  187. include/seqan3/argument_parser/detail/terminal.hpp
  188. include/seqan3/argument_parser/detail/version_check.hpp
  189. include/seqan3/argument_parser/exceptions.hpp
  190. include/seqan3/argument_parser/validators.hpp
  191. include/seqan3/contrib/charconv/LICENSE.TXT
  192. include/seqan3/contrib/charconv/charconv
  193. include/seqan3/contrib/charconv/charconv.cpp
  194. include/seqan3/contrib/charconv/charconv_pre.hpp
  195. include/seqan3/contrib/parallel/buffer_queue.hpp
  196. include/seqan3/contrib/parallel/serialised_resource_pool.hpp
  197. include/seqan3/contrib/parallel/suspendable_queue.hpp
  198. include/seqan3/contrib/span/span
  199. include/seqan3/contrib/stream/bgzf_istream.hpp
  200. include/seqan3/contrib/stream/bgzf_ostream.hpp
  201. include/seqan3/contrib/stream/bgzf_stream_util.hpp
  202. include/seqan3/contrib/stream/bz2_istream.hpp
  203. include/seqan3/contrib/stream/bz2_ostream.hpp
  204. include/seqan3/contrib/stream/gz_istream.hpp
  205. include/seqan3/contrib/stream/gz_ostream.hpp
  206. include/seqan3/core/add_enum_bitwise_operators.hpp
  207. include/seqan3/core/algorithm/algorithm_result_generator_range.hpp
  208. include/seqan3/core/algorithm/all.hpp
  209. include/seqan3/core/algorithm/bound.hpp
  210. include/seqan3/core/algorithm/concept.hpp
  211. include/seqan3/core/algorithm/configuration.hpp
  212. include/seqan3/core/algorithm/configuration_element_debug_mode.hpp
  213. include/seqan3/core/algorithm/configuration_element_parallel_mode.hpp
  214. include/seqan3/core/algorithm/configuration_utility.hpp
  215. include/seqan3/core/algorithm/detail/algorithm_executor_blocking.hpp
  216. include/seqan3/core/algorithm/detail/all.hpp
  217. include/seqan3/core/algorithm/detail/execution_handler_parallel.hpp
  218. include/seqan3/core/algorithm/detail/execution_handler_sequential.hpp
  219. include/seqan3/core/algorithm/pipeable_config_element.hpp
  220. include/seqan3/core/all.hpp
  221. include/seqan3/core/bit_manipulation.hpp
  222. include/seqan3/core/char_operations/all.hpp
  223. include/seqan3/core/char_operations/predicate.hpp
  224. include/seqan3/core/char_operations/predicate_detail.hpp
  225. include/seqan3/core/char_operations/pretty_print.hpp
  226. include/seqan3/core/char_operations/transform.hpp
  227. include/seqan3/core/common_tuple.hpp
  228. include/seqan3/core/concept/all.hpp
  229. include/seqan3/core/concept/cereal.hpp
  230. include/seqan3/core/concept/core_language.hpp
  231. include/seqan3/core/concept/tuple.hpp
  232. include/seqan3/core/configuration/all.hpp
  233. include/seqan3/core/configuration/configuration.hpp
  234. include/seqan3/core/configuration/detail/all.hpp
  235. include/seqan3/core/configuration/detail/concept.hpp
  236. include/seqan3/core/configuration/detail/configuration_element_debug_mode.hpp
  237. include/seqan3/core/configuration/detail/configuration_element_parallel_mode.hpp
  238. include/seqan3/core/configuration/detail/configuration_utility.hpp
  239. include/seqan3/core/configuration/pipeable_config_element.hpp
  240. include/seqan3/core/debug_stream.hpp
  241. include/seqan3/core/debug_stream/byte.hpp
  242. include/seqan3/core/debug_stream/debug_stream_type.hpp
  243. include/seqan3/core/debug_stream/detail/to_string.hpp
  244. include/seqan3/core/debug_stream/optional.hpp
  245. include/seqan3/core/debug_stream/range.hpp
  246. include/seqan3/core/debug_stream/tuple.hpp
  247. include/seqan3/core/debug_stream/variant.hpp
  248. include/seqan3/core/detail/all.hpp
  249. include/seqan3/core/detail/customisation_point.hpp
  250. include/seqan3/core/detail/debug_stream_alphabet.hpp
  251. include/seqan3/core/detail/debug_stream_byte.hpp
  252. include/seqan3/core/detail/debug_stream_optional.hpp
  253. include/seqan3/core/detail/debug_stream_range.hpp
  254. include/seqan3/core/detail/debug_stream_tuple.hpp
  255. include/seqan3/core/detail/debug_stream_type.hpp
  256. include/seqan3/core/detail/debug_stream_variant.hpp
  257. include/seqan3/core/detail/deferred_crtp_base.hpp
  258. include/seqan3/core/detail/empty_type.hpp
  259. include/seqan3/core/detail/endian.hpp
  260. include/seqan3/core/detail/int_types.hpp
  261. include/seqan3/core/detail/is_class_template_declarable.hpp
  262. include/seqan3/core/detail/iterator_traits.hpp
  263. include/seqan3/core/detail/pack_algorithm.hpp
  264. include/seqan3/core/detail/persist_view.hpp
  265. include/seqan3/core/detail/strong_type.hpp
  266. include/seqan3/core/detail/template_inspection.hpp
  267. include/seqan3/core/detail/test_accessor.hpp
  268. include/seqan3/core/detail/to_string.hpp
  269. include/seqan3/core/detail/transfer_type_modifier_onto.hpp
  270. include/seqan3/core/detail/type_inspection.hpp
  271. include/seqan3/core/math.hpp
  272. include/seqan3/core/parallel/all.hpp
  273. include/seqan3/core/parallel/detail/latch.hpp
  274. include/seqan3/core/parallel/detail/reader_writer_manager.hpp
  275. include/seqan3/core/parallel/detail/spin_delay.hpp
  276. include/seqan3/core/parallel/execution.hpp
  277. include/seqan3/core/platform.hpp
  278. include/seqan3/core/pod_tuple.hpp
  279. include/seqan3/core/range/detail/adaptor_base.hpp
  280. include/seqan3/core/range/detail/adaptor_for_view_without_args.hpp
  281. include/seqan3/core/range/detail/adaptor_from_functor.hpp
  282. include/seqan3/core/range/detail/inherited_iterator_base.hpp
  283. include/seqan3/core/range/detail/misc.hpp
  284. include/seqan3/core/range/detail/random_access_iterator.hpp
  285. include/seqan3/core/range/type_traits.hpp
  286. include/seqan3/core/semiregular_box.hpp
  287. include/seqan3/core/simd/all.hpp
  288. include/seqan3/core/simd/concept.hpp
  289. include/seqan3/core/simd/debug_stream_simd.hpp
  290. include/seqan3/core/simd/detail/builtin_simd.hpp
  291. include/seqan3/core/simd/detail/builtin_simd_intrinsics.hpp
  292. include/seqan3/core/simd/detail/default_simd_backend.hpp
  293. include/seqan3/core/simd/detail/default_simd_length.hpp
  294. include/seqan3/core/simd/detail/simd_algorithm_avx2.hpp
  295. include/seqan3/core/simd/detail/simd_algorithm_avx512.hpp
  296. include/seqan3/core/simd/detail/simd_algorithm_sse4.hpp
  297. include/seqan3/core/simd/simd.hpp
  298. include/seqan3/core/simd/simd_algorithm.hpp
  299. include/seqan3/core/simd/simd_traits.hpp
  300. include/seqan3/core/simd/view_iota_simd.hpp
  301. include/seqan3/core/simd/view_to_simd.hpp
  302. include/seqan3/core/tuple_utility.hpp
  303. include/seqan3/core/type_list/all.hpp
  304. include/seqan3/core/type_list/traits.hpp
  305. include/seqan3/core/type_list/type_list.hpp
  306. include/seqan3/core/type_traits/all.hpp
  307. include/seqan3/core/type_traits/basic.hpp
  308. include/seqan3/core/type_traits/concept.hpp
  309. include/seqan3/core/type_traits/deferred_crtp_base.hpp
  310. include/seqan3/core/type_traits/function.hpp
  311. include/seqan3/core/type_traits/iterator.hpp
  312. include/seqan3/core/type_traits/lazy.hpp
  313. include/seqan3/core/type_traits/pack.hpp
  314. include/seqan3/core/type_traits/pre.hpp
  315. include/seqan3/core/type_traits/range.hpp
  316. include/seqan3/core/type_traits/template_inspection.hpp
  317. include/seqan3/core/type_traits/transformation_trait_or.hpp
  318. include/seqan3/io/alignment_file/all.hpp
  319. include/seqan3/io/alignment_file/detail.hpp
  320. include/seqan3/io/alignment_file/format_bam.hpp
  321. include/seqan3/io/alignment_file/format_sam.hpp
  322. include/seqan3/io/alignment_file/format_sam_base.hpp
  323. include/seqan3/io/alignment_file/header.hpp
  324. include/seqan3/io/alignment_file/input.hpp
  325. include/seqan3/io/alignment_file/input_format_concept.hpp
  326. include/seqan3/io/alignment_file/input_options.hpp
  327. include/seqan3/io/alignment_file/misc.hpp
  328. include/seqan3/io/alignment_file/output.hpp
  329. include/seqan3/io/alignment_file/output_format_concept.hpp
  330. include/seqan3/io/alignment_file/output_options.hpp
  331. include/seqan3/io/alignment_file/sam_tag_dictionary.hpp
  332. include/seqan3/io/all.hpp
  333. include/seqan3/io/detail/ignore_output_iterator.hpp
  334. include/seqan3/io/detail/in_file_iterator.hpp
  335. include/seqan3/io/detail/istreambuf_view.hpp
  336. include/seqan3/io/detail/magic_header.hpp
  337. include/seqan3/io/detail/misc.hpp
  338. include/seqan3/io/detail/misc_input.hpp
  339. include/seqan3/io/detail/misc_output.hpp
  340. include/seqan3/io/detail/out_file_iterator.hpp
  341. include/seqan3/io/detail/record.hpp
  342. include/seqan3/io/detail/record_like.hpp
  343. include/seqan3/io/detail/safe_filesystem_entry.hpp
  344. include/seqan3/io/detail/take_exactly_view.hpp
  345. include/seqan3/io/detail/take_line_view.hpp
  346. include/seqan3/io/detail/take_until_view.hpp
  347. include/seqan3/io/detail/take_view.hpp
  348. include/seqan3/io/exception.hpp
  349. include/seqan3/io/record.hpp
  350. include/seqan3/io/sam_file/all.hpp
  351. include/seqan3/io/sam_file/detail/cigar.hpp
  352. include/seqan3/io/sam_file/detail/format_sam_base.hpp
  353. include/seqan3/io/sam_file/format_bam.hpp
  354. include/seqan3/io/sam_file/format_sam.hpp
  355. include/seqan3/io/sam_file/header.hpp
  356. include/seqan3/io/sam_file/input.hpp
  357. include/seqan3/io/sam_file/input_format_concept.hpp
  358. include/seqan3/io/sam_file/input_options.hpp
  359. include/seqan3/io/sam_file/output.hpp
  360. include/seqan3/io/sam_file/output_format_concept.hpp
  361. include/seqan3/io/sam_file/output_options.hpp
  362. include/seqan3/io/sam_file/record.hpp
  363. include/seqan3/io/sam_file/sam_flag.hpp
  364. include/seqan3/io/sam_file/sam_tag_dictionary.hpp
  365. include/seqan3/io/sequence_file/all.hpp
  366. include/seqan3/io/sequence_file/format_embl.hpp
  367. include/seqan3/io/sequence_file/format_fasta.hpp
  368. include/seqan3/io/sequence_file/format_fastq.hpp
  369. include/seqan3/io/sequence_file/format_genbank.hpp
  370. include/seqan3/io/sequence_file/input.hpp
  371. include/seqan3/io/sequence_file/input_format_concept.hpp
  372. include/seqan3/io/sequence_file/input_options.hpp
  373. include/seqan3/io/sequence_file/output.hpp
  374. include/seqan3/io/sequence_file/output_format_concept.hpp
  375. include/seqan3/io/sequence_file/output_options.hpp
  376. include/seqan3/io/sequence_file/record.hpp
  377. include/seqan3/io/stream/all.hpp
  378. include/seqan3/io/stream/concept.hpp
  379. include/seqan3/io/stream/detail/fast_istreambuf_iterator.hpp
  380. include/seqan3/io/stream/detail/fast_ostreambuf_iterator.hpp
  381. include/seqan3/io/stream/detail/stream_buffer_exposer.hpp
  382. include/seqan3/io/stream/iterator.hpp
  383. include/seqan3/io/structure_file/all.hpp
  384. include/seqan3/io/structure_file/detail.hpp
  385. include/seqan3/io/structure_file/format_vienna.hpp
  386. include/seqan3/io/structure_file/input.hpp
  387. include/seqan3/io/structure_file/input_format_concept.hpp
  388. include/seqan3/io/structure_file/input_options.hpp
  389. include/seqan3/io/structure_file/output.hpp
  390. include/seqan3/io/structure_file/output_format_concept.hpp
  391. include/seqan3/io/structure_file/output_options.hpp
  392. include/seqan3/io/structure_file/record.hpp
  393. include/seqan3/io/views/async_input_buffer.hpp
  394. include/seqan3/range/all.hpp
  395. include/seqan3/range/concept.hpp
  396. include/seqan3/range/container/aligned_allocator.hpp
  397. include/seqan3/range/container/all.hpp
  398. include/seqan3/range/container/bitcompressed_vector.hpp
  399. include/seqan3/range/container/concatenated_sequences.hpp
  400. include/seqan3/range/container/concept.hpp
  401. include/seqan3/range/container/dynamic_bitset.hpp
  402. include/seqan3/range/container/small_string.hpp
  403. include/seqan3/range/container/small_vector.hpp
  404. include/seqan3/range/decorator/all.hpp
  405. include/seqan3/range/decorator/gap_decorator.hpp
  406. include/seqan3/range/detail/inherited_iterator_base.hpp
  407. include/seqan3/range/detail/misc.hpp
  408. include/seqan3/range/detail/random_access_iterator.hpp
  409. include/seqan3/range/hash.hpp
  410. include/seqan3/range/shortcuts.hpp
  411. include/seqan3/range/views/all.hpp
  412. include/seqan3/range/views/as_const.hpp
  413. include/seqan3/range/views/async_input_buffer.hpp
  414. include/seqan3/range/views/char_to.hpp
  415. include/seqan3/range/views/chunk.hpp
  416. include/seqan3/range/views/complement.hpp
  417. include/seqan3/range/views/convert.hpp
  418. include/seqan3/range/views/deep.hpp
  419. include/seqan3/range/views/detail.hpp
  420. include/seqan3/range/views/drop.hpp
  421. include/seqan3/range/views/enforce_random_access.hpp
  422. include/seqan3/range/views/get.hpp
  423. include/seqan3/range/views/interleave.hpp
  424. include/seqan3/range/views/istreambuf.hpp
  425. include/seqan3/range/views/join.hpp
  426. include/seqan3/range/views/kmer_hash.hpp
  427. include/seqan3/range/views/minimiser.hpp
  428. include/seqan3/range/views/minimiser_hash.hpp
  429. include/seqan3/range/views/move.hpp
  430. include/seqan3/range/views/pairwise_combine.hpp
  431. include/seqan3/range/views/persist.hpp
  432. include/seqan3/range/views/rank_to.hpp
  433. include/seqan3/range/views/repeat.hpp
  434. include/seqan3/range/views/repeat_n.hpp
  435. include/seqan3/range/views/single_pass_input.hpp
  436. include/seqan3/range/views/slice.hpp
  437. include/seqan3/range/views/take.hpp
  438. include/seqan3/range/views/take_exactly.hpp
  439. include/seqan3/range/views/take_line.hpp
  440. include/seqan3/range/views/take_until.hpp
  441. include/seqan3/range/views/to.hpp
  442. include/seqan3/range/views/to_char.hpp
  443. include/seqan3/range/views/to_lower.hpp
  444. include/seqan3/range/views/to_rank.hpp
  445. include/seqan3/range/views/to_upper.hpp
  446. include/seqan3/range/views/translate.hpp
  447. include/seqan3/range/views/translate_join.hpp
  448. include/seqan3/range/views/trim_quality.hpp
  449. include/seqan3/range/views/type_reduce.hpp
  450. include/seqan3/range/views/zip.hpp
  451. include/seqan3/search/all.hpp
  452. include/seqan3/search/configuration/all.hpp
  453. include/seqan3/search/configuration/default_configuration.hpp
  454. include/seqan3/search/configuration/detail.hpp
  455. include/seqan3/search/configuration/hit.hpp
  456. include/seqan3/search/configuration/max_error.hpp
  457. include/seqan3/search/configuration/max_error_common.hpp
  458. include/seqan3/search/configuration/on_result.hpp
  459. include/seqan3/search/configuration/output.hpp
  460. include/seqan3/search/configuration/parallel.hpp
  461. include/seqan3/search/configuration/result_type.hpp
  462. include/seqan3/search/detail/policy_max_error.hpp
  463. include/seqan3/search/detail/policy_search_result_builder.hpp
  464. include/seqan3/search/detail/search_common.hpp
  465. include/seqan3/search/detail/search_configurator.hpp
  466. include/seqan3/search/detail/search_scheme_algorithm.hpp
  467. include/seqan3/search/detail/search_scheme_precomputed.hpp
  468. include/seqan3/search/detail/search_traits.hpp
  469. include/seqan3/search/detail/unidirectional_search_algorithm.hpp
  470. include/seqan3/search/dream_index/all.hpp
  471. include/seqan3/search/dream_index/interleaved_bloom_filter.hpp
  472. include/seqan3/search/fm_index/all.hpp
  473. include/seqan3/search/fm_index/bi_fm_index.hpp
  474. include/seqan3/search/fm_index/bi_fm_index_cursor.hpp
  475. include/seqan3/search/fm_index/concept.hpp
  476. include/seqan3/search/fm_index/detail/fm_index_cursor.hpp
  477. include/seqan3/search/fm_index/fm_index.hpp
  478. include/seqan3/search/fm_index/fm_index_cursor.hpp
  479. include/seqan3/search/kmer_index/all.hpp
  480. include/seqan3/search/kmer_index/shape.hpp
  481. include/seqan3/search/search.hpp
  482. include/seqan3/search/search_result.hpp
  483. include/seqan3/search/views/kmer_hash.hpp
  484. include/seqan3/search/views/minimiser.hpp
  485. include/seqan3/search/views/minimiser_hash.hpp
  486. include/seqan3/std/algorithm
  487. include/seqan3/std/bit
  488. include/seqan3/std/charconv
  489. include/seqan3/std/concepts
  490. include/seqan3/std/filesystem
  491. include/seqan3/std/iterator
  492. include/seqan3/std/memory
  493. include/seqan3/std/new
  494. include/seqan3/std/ranges
  495. include/seqan3/std/span
  496. include/seqan3/std/type_traits
  497. include/seqan3/submodules/sdsl-lite/include/sdsl/.gitignore
  498. include/seqan3/submodules/sdsl-lite/include/sdsl/CMakeLists.txt
  499. include/seqan3/submodules/sdsl-lite/include/sdsl/bit_vector_il.hpp
  500. include/seqan3/submodules/sdsl-lite/include/sdsl/bit_vectors.hpp
  501. include/seqan3/submodules/sdsl-lite/include/sdsl/bits.hpp
  502. include/seqan3/submodules/sdsl-lite/include/sdsl/bp_support.hpp
  503. include/seqan3/submodules/sdsl-lite/include/sdsl/bp_support_algorithm.hpp
  504. include/seqan3/submodules/sdsl-lite/include/sdsl/bp_support_g.hpp
  505. include/seqan3/submodules/sdsl-lite/include/sdsl/bp_support_gg.hpp
  506. include/seqan3/submodules/sdsl-lite/include/sdsl/bp_support_sada.hpp
  507. include/seqan3/submodules/sdsl-lite/include/sdsl/cereal.hpp
  508. include/seqan3/submodules/sdsl-lite/include/sdsl/coder.hpp
  509. include/seqan3/submodules/sdsl-lite/include/sdsl/coder_comma.hpp
  510. include/seqan3/submodules/sdsl-lite/include/sdsl/coder_elias_delta.hpp
  511. include/seqan3/submodules/sdsl-lite/include/sdsl/coder_elias_gamma.hpp
  512. include/seqan3/submodules/sdsl-lite/include/sdsl/coder_fibonacci.hpp
  513. include/seqan3/submodules/sdsl-lite/include/sdsl/config.hpp
  514. include/seqan3/submodules/sdsl-lite/include/sdsl/construct.hpp
  515. include/seqan3/submodules/sdsl-lite/include/sdsl/construct_bwt.hpp
  516. include/seqan3/submodules/sdsl-lite/include/sdsl/construct_config.hpp
  517. include/seqan3/submodules/sdsl-lite/include/sdsl/construct_isa.hpp
  518. include/seqan3/submodules/sdsl-lite/include/sdsl/construct_lcp.hpp
  519. include/seqan3/submodules/sdsl-lite/include/sdsl/construct_lcp_helper.hpp
  520. include/seqan3/submodules/sdsl-lite/include/sdsl/construct_sa.hpp
  521. include/seqan3/submodules/sdsl-lite/include/sdsl/construct_sa_se.hpp
  522. include/seqan3/submodules/sdsl-lite/include/sdsl/csa_alphabet_strategy.hpp
  523. include/seqan3/submodules/sdsl-lite/include/sdsl/csa_bitcompressed.hpp
  524. include/seqan3/submodules/sdsl-lite/include/sdsl/csa_sada.hpp
  525. include/seqan3/submodules/sdsl-lite/include/sdsl/csa_sampling_strategy.hpp
  526. include/seqan3/submodules/sdsl-lite/include/sdsl/csa_wt.hpp
  527. include/seqan3/submodules/sdsl-lite/include/sdsl/cst_fully.hpp
  528. include/seqan3/submodules/sdsl-lite/include/sdsl/cst_iterators.hpp
  529. include/seqan3/submodules/sdsl-lite/include/sdsl/cst_sada.hpp
  530. include/seqan3/submodules/sdsl-lite/include/sdsl/cst_sct3.hpp
  531. include/seqan3/submodules/sdsl-lite/include/sdsl/dac_vector.hpp
  532. include/seqan3/submodules/sdsl-lite/include/sdsl/divsufsort.hpp
  533. include/seqan3/submodules/sdsl-lite/include/sdsl/enc_vector.hpp
  534. include/seqan3/submodules/sdsl-lite/include/sdsl/fast_cache.hpp
  535. include/seqan3/submodules/sdsl-lite/include/sdsl/hyb_vector.hpp
  536. include/seqan3/submodules/sdsl-lite/include/sdsl/int_vector.hpp
  537. include/seqan3/submodules/sdsl-lite/include/sdsl/int_vector_buffer.hpp
  538. include/seqan3/submodules/sdsl-lite/include/sdsl/int_vector_io_wrappers.hpp
  539. include/seqan3/submodules/sdsl-lite/include/sdsl/int_vector_mapper.hpp
  540. include/seqan3/submodules/sdsl-lite/include/sdsl/inv_perm_support.hpp
  541. include/seqan3/submodules/sdsl-lite/include/sdsl/io.hpp
  542. include/seqan3/submodules/sdsl-lite/include/sdsl/iterators.hpp
  543. include/seqan3/submodules/sdsl-lite/include/sdsl/k2_treap.hpp
  544. include/seqan3/submodules/sdsl-lite/include/sdsl/k2_treap_algorithm.hpp
  545. include/seqan3/submodules/sdsl-lite/include/sdsl/k2_treap_helper.hpp
  546. include/seqan3/submodules/sdsl-lite/include/sdsl/k2_tree.hpp
  547. include/seqan3/submodules/sdsl-lite/include/sdsl/k2_tree_helper.hpp
  548. include/seqan3/submodules/sdsl-lite/include/sdsl/lcp.hpp
  549. include/seqan3/submodules/sdsl-lite/include/sdsl/lcp_bitcompressed.hpp
  550. include/seqan3/submodules/sdsl-lite/include/sdsl/lcp_byte.hpp
  551. include/seqan3/submodules/sdsl-lite/include/sdsl/lcp_dac.hpp
  552. include/seqan3/submodules/sdsl-lite/include/sdsl/lcp_support_sada.hpp
  553. include/seqan3/submodules/sdsl-lite/include/sdsl/lcp_support_tree.hpp
  554. include/seqan3/submodules/sdsl-lite/include/sdsl/lcp_support_tree2.hpp
  555. include/seqan3/submodules/sdsl-lite/include/sdsl/lcp_vlc.hpp
  556. include/seqan3/submodules/sdsl-lite/include/sdsl/lcp_wt.hpp
  557. include/seqan3/submodules/sdsl-lite/include/sdsl/louds_tree.hpp
  558. include/seqan3/submodules/sdsl-lite/include/sdsl/memory_management.hpp
  559. include/seqan3/submodules/sdsl-lite/include/sdsl/memory_tracking.hpp
  560. include/seqan3/submodules/sdsl-lite/include/sdsl/nearest_neighbour_dictionary.hpp
  561. include/seqan3/submodules/sdsl-lite/include/sdsl/nn_dict_dynamic.hpp
  562. include/seqan3/submodules/sdsl-lite/include/sdsl/platform.hpp
  563. include/seqan3/submodules/sdsl-lite/include/sdsl/qsufsort.hpp
  564. include/seqan3/submodules/sdsl-lite/include/sdsl/ram_filebuf.hpp
  565. include/seqan3/submodules/sdsl-lite/include/sdsl/ram_fs.hpp
  566. include/seqan3/submodules/sdsl-lite/include/sdsl/rank_support.hpp
  567. include/seqan3/submodules/sdsl-lite/include/sdsl/rank_support_scan.hpp
  568. include/seqan3/submodules/sdsl-lite/include/sdsl/rank_support_v.hpp
  569. include/seqan3/submodules/sdsl-lite/include/sdsl/rank_support_v5.hpp
  570. include/seqan3/submodules/sdsl-lite/include/sdsl/rmq_succinct_sada.hpp
  571. include/seqan3/submodules/sdsl-lite/include/sdsl/rmq_succinct_sct.hpp
  572. include/seqan3/submodules/sdsl-lite/include/sdsl/rmq_support.hpp
  573. include/seqan3/submodules/sdsl-lite/include/sdsl/rmq_support_sparse_table.hpp
  574. include/seqan3/submodules/sdsl-lite/include/sdsl/rrr_helper.hpp
  575. include/seqan3/submodules/sdsl-lite/include/sdsl/rrr_vector.hpp
  576. include/seqan3/submodules/sdsl-lite/include/sdsl/rrr_vector_15.hpp
  577. include/seqan3/submodules/sdsl-lite/include/sdsl/sd_vector.hpp
  578. include/seqan3/submodules/sdsl-lite/include/sdsl/sdsl_concepts.hpp
  579. include/seqan3/submodules/sdsl-lite/include/sdsl/select_support.hpp
  580. include/seqan3/submodules/sdsl-lite/include/sdsl/select_support_mcl.hpp
  581. include/seqan3/submodules/sdsl-lite/include/sdsl/select_support_scan.hpp
  582. include/seqan3/submodules/sdsl-lite/include/sdsl/sfstream.hpp
  583. include/seqan3/submodules/sdsl-lite/include/sdsl/sorted_int_stack.hpp
  584. include/seqan3/submodules/sdsl-lite/include/sdsl/sorted_multi_stack_support.hpp
  585. include/seqan3/submodules/sdsl-lite/include/sdsl/sorted_stack_support.hpp
  586. include/seqan3/submodules/sdsl-lite/include/sdsl/structure_tree.hpp
  587. include/seqan3/submodules/sdsl-lite/include/sdsl/structure_tree.hpp.cmake
  588. include/seqan3/submodules/sdsl-lite/include/sdsl/suffix_array_algorithm.hpp
  589. include/seqan3/submodules/sdsl-lite/include/sdsl/suffix_array_helper.hpp
  590. include/seqan3/submodules/sdsl-lite/include/sdsl/suffix_arrays.hpp
  591. include/seqan3/submodules/sdsl-lite/include/sdsl/suffix_tree_algorithm.hpp
  592. include/seqan3/submodules/sdsl-lite/include/sdsl/suffix_tree_helper.hpp
  593. include/seqan3/submodules/sdsl-lite/include/sdsl/suffix_trees.hpp
  594. include/seqan3/submodules/sdsl-lite/include/sdsl/uint128_t.hpp
  595. include/seqan3/submodules/sdsl-lite/include/sdsl/uint256_t.hpp
  596. include/seqan3/submodules/sdsl-lite/include/sdsl/uintx_t.hpp
  597. include/seqan3/submodules/sdsl-lite/include/sdsl/util.hpp
  598. include/seqan3/submodules/sdsl-lite/include/sdsl/vectors.hpp
  599. include/seqan3/submodules/sdsl-lite/include/sdsl/version.hpp
  600. include/seqan3/submodules/sdsl-lite/include/sdsl/vlc_vector.hpp
  601. include/seqan3/submodules/sdsl-lite/include/sdsl/wavelet_trees.hpp
  602. include/seqan3/submodules/sdsl-lite/include/sdsl/wm_int.hpp
  603. include/seqan3/submodules/sdsl-lite/include/sdsl/wt_algorithm.hpp
  604. include/seqan3/submodules/sdsl-lite/include/sdsl/wt_ap.hpp
  605. include/seqan3/submodules/sdsl-lite/include/sdsl/wt_blcd.hpp
  606. include/seqan3/submodules/sdsl-lite/include/sdsl/wt_gmr.hpp
  607. include/seqan3/submodules/sdsl-lite/include/sdsl/wt_helper.hpp
  608. include/seqan3/submodules/sdsl-lite/include/sdsl/wt_huff.hpp
  609. include/seqan3/submodules/sdsl-lite/include/sdsl/wt_hutu.hpp
  610. include/seqan3/submodules/sdsl-lite/include/sdsl/wt_int.hpp
  611. include/seqan3/submodules/sdsl-lite/include/sdsl/wt_pc.hpp
  612. include/seqan3/submodules/sdsl-lite/include/sdsl/wt_rlmn.hpp
  613. include/seqan3/utility/all.hpp
  614. include/seqan3/utility/char_operations/all.hpp
  615. include/seqan3/utility/char_operations/predicate.hpp
  616. include/seqan3/utility/char_operations/predicate_detail.hpp
  617. include/seqan3/utility/char_operations/pretty_print.hpp
  618. include/seqan3/utility/char_operations/transform.hpp
  619. include/seqan3/utility/container/aligned_allocator.hpp
  620. include/seqan3/utility/container/concept.hpp
  621. include/seqan3/utility/container/dynamic_bitset.hpp
  622. include/seqan3/utility/container/small_string.hpp
  623. include/seqan3/utility/container/small_vector.hpp
  624. include/seqan3/utility/detail/bits_of.hpp
  625. include/seqan3/utility/detail/exposition_only_concept.hpp
  626. include/seqan3/utility/detail/integer_traits.hpp
  627. include/seqan3/utility/detail/multi_invocable.hpp
  628. include/seqan3/utility/detail/to_little_endian.hpp
  629. include/seqan3/utility/detail/type_name_as_string.hpp
  630. include/seqan3/utility/math.hpp
  631. include/seqan3/utility/parallel/all.hpp
  632. include/seqan3/utility/parallel/detail/all.hpp
  633. include/seqan3/utility/parallel/detail/latch.hpp
  634. include/seqan3/utility/parallel/detail/reader_writer_manager.hpp
  635. include/seqan3/utility/parallel/detail/spin_delay.hpp
  636. include/seqan3/utility/range/concept.hpp
  637. include/seqan3/utility/simd/algorithm.hpp
  638. include/seqan3/utility/simd/all.hpp
  639. include/seqan3/utility/simd/concept.hpp
  640. include/seqan3/utility/simd/detail/builtin_simd.hpp
  641. include/seqan3/utility/simd/detail/builtin_simd_intrinsics.hpp
  642. include/seqan3/utility/simd/detail/debug_stream_simd.hpp
  643. include/seqan3/utility/simd/detail/default_simd_backend.hpp
  644. include/seqan3/utility/simd/detail/default_simd_length.hpp
  645. include/seqan3/utility/simd/detail/simd_algorithm_avx2.hpp
  646. include/seqan3/utility/simd/detail/simd_algorithm_avx512.hpp
  647. include/seqan3/utility/simd/detail/simd_algorithm_sse4.hpp
  648. include/seqan3/utility/simd/simd.hpp
  649. include/seqan3/utility/simd/simd_traits.hpp
  650. include/seqan3/utility/simd/views/iota_simd.hpp
  651. include/seqan3/utility/simd/views/to_simd.hpp
  652. include/seqan3/utility/tuple/all.hpp
  653. include/seqan3/utility/tuple/common_tuple.hpp
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  655. include/seqan3/utility/tuple/pod_tuple.hpp
  656. include/seqan3/utility/tuple/pop_front.hpp
  657. include/seqan3/utility/tuple/split.hpp
  658. include/seqan3/utility/type_list/all.hpp
  659. include/seqan3/utility/type_list/traits.hpp
  660. include/seqan3/utility/type_list/type_list.hpp
  661. include/seqan3/utility/type_pack/all.hpp
  662. include/seqan3/utility/type_pack/traits.hpp
  663. include/seqan3/utility/type_traits/all.hpp
  664. include/seqan3/utility/type_traits/basic.hpp
  665. include/seqan3/utility/type_traits/concept.hpp
  666. include/seqan3/utility/type_traits/detail/transformation_trait_or.hpp
  667. include/seqan3/utility/type_traits/function_traits.hpp
  668. include/seqan3/utility/type_traits/lazy_conditional.hpp
  669. include/seqan3/utility/type_traits/pre.hpp
  670. include/seqan3/utility/views/chunk.hpp
  671. include/seqan3/utility/views/convert.hpp
  672. include/seqan3/utility/views/deep.hpp
  673. include/seqan3/utility/views/elements.hpp
  674. include/seqan3/utility/views/enforce_random_access.hpp
  675. include/seqan3/utility/views/interleave.hpp
  676. include/seqan3/utility/views/join_with.hpp
  677. include/seqan3/utility/views/pairwise_combine.hpp
  678. include/seqan3/utility/views/repeat.hpp
  679. include/seqan3/utility/views/repeat_n.hpp
  680. include/seqan3/utility/views/single_pass_input.hpp
  681. include/seqan3/utility/views/slice.hpp
  682. include/seqan3/utility/views/to.hpp
  683. include/seqan3/utility/views/type_reduce.hpp
  684. include/seqan3/utility/views/zip.hpp
  685. include/seqan3/version.hpp
  686. share/cmake/seqan3/seqan3-config-version.cmake
  687. share/cmake/seqan3/seqan3-config.cmake
  688. @owner
  689. @group
  690. @mode
Collapse this list.
Dependency lines:
  • seqan3>0:biology/seqan3
To install the port: cd /usr/ports/biology/seqan3/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/seqan3
  • pkg install seqan3
PKGNAME: seqan3
Flavors: there is no flavor information for this port.
distinfo:
Packages (timestamps in pop-ups are UTC):
seqan3
ABIlatestquarterly
FreeBSD:11:aarch64--
FreeBSD:11:amd643.0.33.0.3
FreeBSD:11:armv6--
FreeBSD:11:i3863.0.33.0.3
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64-3.0.3
FreeBSD:12:amd643.0.33.0.3
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i3863.0.33.0.3
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch64-3.0.3
FreeBSD:13:amd643.0.33.0.3
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i3863.0.33.0.3
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:14:aarch643.0.3-
FreeBSD:14:amd643.0.3-
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i3863.0.3-
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. cereal>0 : devel/cereal
  2. range-v3>0 : devel/range-v3
  3. cmake : devel/cmake
  4. ninja : devel/ninja
Runtime dependencies:
  1. cereal>0 : devel/cereal
  2. range-v3>0 : devel/range-v3
  3. coin-or-lemon>0 : math/lemon
There are no ports dependent upon this port

Configuration Options:
Options name:

USES:

FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. https://codeload.github.com/seqan/seqan3/tar.gz/3.0.3?dummy=/
Collapse this list.

Number of commits found: 5

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
13 Aug 2021 17:08:56
 files touched by this commit commit hash:cea0bdfd08136dacc2aa9f14aa340718acca4cb2  3.0.3
yuri search for other commits by this committer
biology/seqan3: Add the 'test' target (currently broken due to lacking clang
support)
30 May 2021 05:38:08
 files touched by this commit commit hash:8541c28c0793232ef5694134ca48e0024afd4057  3.0.3
yuri search for other commits by this committer
biology/seqan3: Update 3.0.2-1195 -> 3.0.3

Reported by:	portscout
12 May 2021 05:46:21
 files touched by this commit commit hash:4235be66023db75f025d983c5096422a01499a87  3.0.2.1195_2
yuri search for other commits by this committer
biology/seqan3: Correct dependencies
12 May 2021 02:51:37
 files touched by this commit commit hash:caced2ad007d760ef52e0488bfc8565d03b710b2  3.0.2.1195_1
yuri search for other commits by this committer
biology/seqan3: Add dependency math/lemon
12 May 2021 01:21:38
 files touched by this commit commit hash:37be6965367eec49bc848623a2ad782d8f74471a  3.0.2.1195
yuri search for other commits by this committer
New port: biology/seqan3: C++ header-only library for biological sequence
analysis

Number of commits found: 5