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I started running short on disk space for the non-production FreshPorts hosts. This time, I have decided to ask for donations. See my recent blog post which points to my Patreon account.
Commit processing is stalled - it is a jail issue. I will work on it later today. 2025-09-17 12:17 UTC - It has been fixed. Sometime before 17:27 UTC.
non port: biology/sra-tools/files/ld.bsd.clang.sh

Number of commits found: 2

Thursday, 10 Aug 2023
17:17 Jason W. Bacon (jwb) search for other commits by this committer
biology/sra-tools: Update to 3.0.6

Major code and build system rework since 2.11
Now supports aarch64, unblocking rna-seq and atac-seq metaports
Changes: https://github.com/ncbi/sra-tools/commits/master

Reported by:    portscout
commit hash: 0f2f80ca3833a64ea2d60aa706cf794d5e0ffd63 commit hash: 0f2f80ca3833a64ea2d60aa706cf794d5e0ffd63 commit hash: 0f2f80ca3833a64ea2d60aa706cf794d5e0ffd63 commit hash: 0f2f80ca3833a64ea2d60aa706cf794d5e0ffd63 0f2f80c
Tuesday, 22 Jun 2021
17:55 Jason W. Bacon (jwb) search for other commits by this committer
biology/sra-tools: NCBI's toolkit for handling data in INSDC Sequence Read
Archives

SRA tools is a toolkit for using data in the INSDC Sequence Read Archives.

SRAs operated by International Nucleotide Sequence Database Collaboration
houses sequence reads and alignments generated by "next-gen" sequencers.

This port is a bit convoluted due to the fact that the sra-tools build
requires access to the ncbi-vdb source tree.  Hence, ncbi-vdb is treated
as a submodule here rather than a separate library port.  We are working
with upstream with hope for long-term improvements.
commit hash: 69656bf0d7d99660e536c22472a5eae639695a97 commit hash: 69656bf0d7d99660e536c22472a5eae639695a97 commit hash: 69656bf0d7d99660e536c22472a5eae639695a97 commit hash: 69656bf0d7d99660e536c22472a5eae639695a97 69656bf

Number of commits found: 2