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Port details on branch 2023Q1
taxonkit Practical and efficient NCBI taxonomy toolkit
0.14.1_2 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 0.19.0_12Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2023-02-17 10:51:08
Last Update: 2023-03-09 19:50:37
Commit Hash: 636f0a9
License: MIT
WWW:
https://bioinf.shenwei.me/taxonkit/
Description:
TaxonKit allows to: * list taxonomic subtrees (TaxIds) * query taxonomic lineage of given TaxIds * reformat lineage in canonical ranks * convert scientific names to TaxIds * filter TaxIds by taxonomic rank range * compute lowest common ancestor (LCA) for TaxIds * create TaxId changelog from dump archives
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (4 items)
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  1. bin/taxonkit
  2. /usr/local/share/licenses/taxonkit-0.14.1_2/catalog.mk
  3. /usr/local/share/licenses/taxonkit-0.14.1_2/LICENSE
  4. /usr/local/share/licenses/taxonkit-0.14.1_2/MIT
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USE_RC_SUBR (Service Scripts)
  • no SUBR information found for this port
Dependency lines:
  • taxonkit>0:biology/taxonkit
To install the port:
cd /usr/ports/biology/taxonkit/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/taxonkit
  • pkg install taxonkit
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: taxonkit
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1672122101 SHA256 (go/biology_taxonkit/taxonkit-v0.14.1/v0.14.1.mod) = 091834993521d197914c2f19ce12591eb6bb0369262ad83f49fd91043200f7fb SIZE (go/biology_taxonkit/taxonkit-v0.14.1/v0.14.1.mod) = 1051

Expand this list (2 items)

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SHA256 (go/biology_taxonkit/taxonkit-v0.14.1/v0.14.1.zip) = ceaa40ee2684b86e8fcefaef9bee4c6e5f45c6f63d11cfa20f8d28b43df0e1be SIZE (go/biology_taxonkit/taxonkit-v0.14.1/v0.14.1.zip) = 1600177

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Packages (timestamps in pop-ups are UTC):
taxonkit
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest0.19.0_110.19.0_13-0.19.0_60.19.0_13n/an/an/a
FreeBSD:13:quarterly0.19.0_120.19.0_12-0.19.0_30.19.0_12n/an/an/a
FreeBSD:14:latest0.19.0_130.19.0_13-0.19.0_50.19.0_13---
FreeBSD:14:quarterly0.19.0_120.19.0_12-0.19.0_30.19.0_12---
FreeBSD:15:latest0.19.0_130.19.0_13n/a-n/an/a--
FreeBSD:15:quarterly0.19.0_120.19.0_12n/a-n/an/a--
FreeBSD:16:latest0.19.0_130.19.0_13n/a-n/an/a--
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. go119 : lang/go119
Fetch dependencies:
  1. go119 : lang/go119
  2. ca_root_nss>0 : security/ca_root_nss
There are no ports dependent upon this port
Configuration Options:
No options to configure
Options name:
biology_taxonkit
USES:
go:modules zip
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
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  1. https://proxy.golang.org/github.com/shenwei356/taxonkit/@v/
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Number of commits found: 2

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
0.14.1_2
09 Mar 2023 19:50:37
commit hash: 636f0a9700972e851eb2139edc655a613f8c5a25commit hash: 636f0a9700972e851eb2139edc655a613f8c5a25commit hash: 636f0a9700972e851eb2139edc655a613f8c5a25commit hash: 636f0a9700972e851eb2139edc655a613f8c5a25 files touched by this commit		 Dmitri Goutnik (dmgk) search for other commits by this committer 
all: Bump PORTREVISION after lang/go119 update

Direct commit to quarterly to bump Go ports revisions after 61a665d2d8d2

Approved by:    ports-secteam (blanket)
0.14.1_1
17 Feb 2023 10:49:10
commit hash: 9ff952570bc5120a01d31a8406f17ad49ddfb2e9commit hash: 9ff952570bc5120a01d31a8406f17ad49ddfb2e9commit hash: 9ff952570bc5120a01d31a8406f17ad49ddfb2e9commit hash: 9ff952570bc5120a01d31a8406f17ad49ddfb2e9 files touched by this commit		 Dmitri Goutnik (dmgk) search for other commits by this committer 
all: Bump PORTREVISION after lang/go119 update

Direct commit to quarterly to bump Go ports revisions after f30271912e48

Approved by:	riggs (ports-secteam)

Number of commits found: 2
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