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non port: biology/tophat/pkg-descr

Number of commits found: 1

Fri, 27 Sep 2019
[ 00:49 jwb search for other commits by this committer ] Original commit   Revision:512997 (Only the first 10 of 11 ports in this commit are shown above. View all ports for this commit)
biology/tophat: Fast splice junction mapper for RNA-Seq reads

TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq
reads to mammalian-sized genomes using the ultra high-throughput short read
aligner Bowtie, and then analyzes the mapping results to identify splice
junctions between exons.


TopHat has been Superseded by HISAT2 and is no longer maintained upstream.
This port is provided mainly for revisiting old studies where TopHat was used.

Number of commits found: 1