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Port details on branch 2023Q1
unikmer Toolkit for nucleic acid k-mer analysis, set operations on k-mers
0.19.1_2 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 0.20.0_19Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2023-02-17 10:51:08
Last Update: 2023-03-09 19:50:37
Commit Hash: 636f0a9
License: MIT
WWW:
https://github.com/shenwei356/unikmer
Description:
unikmer is a golang package and a toolkit for nucleic acid k-mer analysis, providing functions including set operation k-mers (sketch) optional with TaxIds but without count information. K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64, and serialized in binary file with extension .unik. TaxIds can be assigned when counting k-mers from genome sequences, and LCA (Lowest Common Ancestor) is computed during set opertions including computing union, intersecton, set difference, unique and repeated k-mers.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (4 items)
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  1. bin/unikmer
  2. /usr/local/share/licenses/unikmer-0.19.1_2/catalog.mk
  3. /usr/local/share/licenses/unikmer-0.19.1_2/LICENSE
  4. /usr/local/share/licenses/unikmer-0.19.1_2/MIT
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USE_RC_SUBR (Service Scripts)
  • no SUBR information found for this port
Dependency lines:
  • unikmer>0:biology/unikmer
To install the port:
cd /usr/ports/biology/unikmer/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/unikmer
  • pkg install unikmer
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: unikmer
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1672122070 SHA256 (go/biology_unikmer/unikmer-v0.19.1/v0.19.1.mod) = 7b62d5cd96cb392e6b06bec08dc810fbe1dda7a2201e95e2ff04a3c631048347 SIZE (go/biology_unikmer/unikmer-v0.19.1/v0.19.1.mod) = 1359

Expand this list (2 items)

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SHA256 (go/biology_unikmer/unikmer-v0.19.1/v0.19.1.zip) = d2a25e1fb9eb1701de64f843de9653adf02bf343324c236d08f5d510d6c8e3d2 SIZE (go/biology_unikmer/unikmer-v0.19.1/v0.19.1.zip) = 4286117

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Packages (timestamps in pop-ups are UTC):
unikmer
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest0.20.0_180.20.0_18-0.20.0_100.20.0_19n/an/an/a
FreeBSD:13:quarterly0.20.0_170.20.0_19-0.20.0_70.20.0_19n/an/an/a
FreeBSD:14:latest0.20.0_180.20.0_19-0.20.0_90.20.0_19---
FreeBSD:14:quarterly0.20.0_190.20.0_19-0.20.0_70.20.0_19---
FreeBSD:15:latest0.20.0_190.20.0_19n/a-n/an/a--
FreeBSD:15:quarterly0.20.0_190.20.0_19n/a-n/an/a--
FreeBSD:16:latest0.20.0_180.20.0_19n/a-n/an/a--
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. go119 : lang/go119
Test dependencies:
  1. csvtk : science/csvtk
  2. perl5>=5.32.r0<5.33 : lang/perl5.32
Fetch dependencies:
  1. go119 : lang/go119
  2. ca_root_nss>0 : security/ca_root_nss
There are no ports dependent upon this port
Configuration Options:
No options to configure
Options name:
biology_unikmer
USES:
go:modules perl5 zip
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
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  1. https://proxy.golang.org/github.com/shenwei356/unikmer/@v/
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Number of commits found: 2

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
0.19.1_2
09 Mar 2023 19:50:37
commit hash: 636f0a9700972e851eb2139edc655a613f8c5a25commit hash: 636f0a9700972e851eb2139edc655a613f8c5a25commit hash: 636f0a9700972e851eb2139edc655a613f8c5a25commit hash: 636f0a9700972e851eb2139edc655a613f8c5a25 files touched by this commit		 Dmitri Goutnik (dmgk) search for other commits by this committer 
all: Bump PORTREVISION after lang/go119 update

Direct commit to quarterly to bump Go ports revisions after 61a665d2d8d2

Approved by:    ports-secteam (blanket)
0.19.1_1
17 Feb 2023 10:49:10
commit hash: 9ff952570bc5120a01d31a8406f17ad49ddfb2e9commit hash: 9ff952570bc5120a01d31a8406f17ad49ddfb2e9commit hash: 9ff952570bc5120a01d31a8406f17ad49ddfb2e9commit hash: 9ff952570bc5120a01d31a8406f17ad49ddfb2e9 files touched by this commit		 Dmitri Goutnik (dmgk) search for other commits by this committer 
all: Bump PORTREVISION after lang/go119 update

Direct commit to quarterly to bump Go ports revisions after f30271912e48

Approved by:	riggs (ports-secteam)

Number of commits found: 2
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