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/commits.php is going away

I'm proposing to take /commits.php away - it mainly duplicates the home page. Details in this GitHub issue.
Port details
wise Intelligent algorithms for DNA searches
2.4.1_1 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 2.4.1_1Version of this port present on the latest quarterly branch.
There is no maintainer for this port.
Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2002-09-10 13:59:05
Last Update: 2021-04-06 14:31:07
Commit Hash: 305f148
License: not specified in port
Description:
SVNWeb : git : Homepage
pkg-plist: as obtained via: make generate-plist
Expand this list (35 items)
Collapse this list.
  1. bin/dba
  2. bin/dnal
  3. bin/estwise
  4. bin/estwisedb
  5. bin/genewise
  6. bin/genewisedb
  7. bin/promoterwise
  8. bin/psw
  9. bin/pswdb
  10. bin/scanwise
  11. bin/scanwise_server
  12. share/wise/BLOSUM30.bla
  13. share/wise/BLOSUM45.bla
  14. share/wise/BLOSUM62.bla
  15. share/wise/BLOSUM80.bla
  16. share/wise/aa.rnd
  17. share/wise/cb.tmf
  18. share/wise/codon.table
  19. share/wise/gene.stat
  20. share/wise/gon120.bla
  21. share/wise/gon160.bla
  22. share/wise/gon200.bla
  23. share/wise/gon250.bla
  24. share/wise/gon350.bla
  25. share/wise/human.gf
  26. share/wise/human.gp
  27. share/wise/human.stats
  28. share/wise/idenity.bla
  29. share/wise/methods
  30. share/wise/pb.gf
  31. share/wise/pombe.gf
  32. share/wise/tm.pri
  33. share/wise/wise.2
  34. share/wise/wise.per
  35. share/wise/worm.gf
Collapse this list.
Dependency lines:
  • wise>0:biology/wise
To install the port: cd /usr/ports/biology/wise/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/wise
  • pkg install wise
PKGNAME: wise
Flavors: there is no flavor information for this port.
distinfo:
Packages (timestamps in pop-ups are UTC):
wise
ABIlatestquarterly
FreeBSD:11:aarch642.4.1_12.4.1_1
FreeBSD:11:amd642.4.1_12.4.1_1
FreeBSD:11:armv62.4.12.4.1_1
FreeBSD:11:i3862.4.1_12.4.1_1
FreeBSD:11:mips--
FreeBSD:11:mips642.4.1-
FreeBSD:12:aarch642.4.1_12.4.1_1
FreeBSD:12:amd642.4.1_12.4.1_1
FreeBSD:12:armv62.4.1_12.4.1_1
FreeBSD:12:armv72.4.1_12.4.1_1
FreeBSD:12:i3862.4.1_12.4.1_1
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64-2.4.1_1
FreeBSD:13:aarch642.4.1_12.4.1_1
FreeBSD:13:amd642.4.1_12.4.1_1
FreeBSD:13:armv62.4.1_1-
FreeBSD:13:armv72.4.1_12.4.1_1
FreeBSD:13:i3862.4.1_12.4.1_1
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64-2.4.1_1
FreeBSD:14:aarch642.4.1_1-
FreeBSD:14:amd642.4.1_1-
FreeBSD:14:armv6--
FreeBSD:14:armv72.4.1_1-
FreeBSD:14:i3862.4.1_1-
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc642.4.1_1-
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. pkgconf>=1.3.0_1 : devel/pkgconf
Library dependencies:
  1. libglib-2.0.so : devel/glib20
  2. libintl.so : devel/gettext-runtime
There are no ports dependent upon this port

Configuration Options:
Options name:

USES:

pkg-message:
If installing:
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. http://www.ebi.ac.uk/~birney/wise2/
Collapse this list.

Number of commits found: 28

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
06 Apr 2021 14:31:07
 files touched by this commit commit hash:305f148f482daf30dcf728039d03d019f88344eb  2.4.1_1
mat search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
08 Nov 2019 09:27:57
Original commit files touched by this commit Revision:517040  2.4.1_1
tobik search for other commits by this committer
a-b: Add missing USES={gnome,php,sdl,xorg}
13 Aug 2019 16:00:39
Original commit files touched by this commit Revision:508834  2.4.1_1
mat search for other commits by this committer
Convert to UCL & cleanup pkg-message (categories a-c)
08 Dec 2016 19:52:20
Original commit files touched by this commit Revision:428152  2.4.1_1
tijl search for other commits by this committer
Remove libintl.so.9 compatibility link that was added in r374303 to
prevent massive PORTREVISION bumps.  Bump dependent ports that have not
been bumped since.
21 Jun 2016 09:05:06
Original commit files touched by this commit Revision:417195  2.4.1
amdmi3 search for other commits by this committer
- Switch to options helpers
- Regenerate patches with `make makepatch`
13 May 2016 18:39:07
Original commit files touched by this commit Revision:415129  2.4.1
bapt search for other commits by this committer
Prevent collision with getline(3)
20 Dec 2014 17:27:09
Original commit files touched by this commit Revision:375014  2.4.1
bapt search for other commits by this committer
Cleanup plist
24 Mar 2014 10:46:35
Original commit files touched by this commit Revision:348933  2.4.1
pawel search for other commits by this committer
- Add staging support
- Unmute install commands
05 Feb 2014 23:42:06
Original commit files touched by this commit Revision:342903  2.4.1
marino search for other commits by this committer
biology/wise: Add dragonfly support
20 Sep 2013 15:55:44
Original commit files touched by this commit Revision:327709  2.4.1
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
03 Aug 2013 13:44:01
Original commit files touched by this commit Revision:324191  2.4.1  Sanity Test Failure
mat search for other commits by this committer
- Convert to new perl framework
- Remove MAKE_JOBS_SAFE=yes, it's the default.
03 May 2013 20:48:35
Original commit files touched by this commit Revision:317247  2.4.1
bapt search for other commits by this committer
Fix build by adding an explicit dep on pkgconf
02 Mar 2013 14:50:25
Original commit files touched by this commit Revision:313250  2.4.1
miwi search for other commits by this committer
- Update to 2.4.1

PR:		176552
Submitted by:	Ports Fury
19 Mar 2011 12:38:54
Original commit files touched by this commit   2.2.0
miwi search for other commits by this committer
- Get Rid MD5 support
16 Nov 2010 23:55:41
Original commit files touched by this commit   2.2.0
skreuzer search for other commits by this committer
Fix plist.

Reported by:    QAT
08 Jan 2010 01:30:20
Original commit files touched by this commit   2.2.0
pgollucci search for other commits by this committer
- SBU_FILES += pkg-message

PR:             ports/142409
Submitted by:   Sevan Janiyan <venture37@geeklan.co.uk>
26 Dec 2006 12:46:34
Original commit files touched by this commit   2.2.0
linimon search for other commits by this committer
Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response
to email.

Hat:            portmgr
03 May 2006 23:26:35
Original commit files touched by this commit   2.2.0
edwin search for other commits by this committer
Remove USE_REINPLACE from all categories starting with B
22 Jan 2006 08:20:34
Original commit files touched by this commit   2.2.0
edwin search for other commits by this committer
SHA256ify

Approved by:    krion@
09 Jan 2006 03:25:03
Original commit files touched by this commit   2.2.0
edwin search for other commits by this committer
Fix maintainer address

    From: Tony Maher <anthony.maher@uts.edu.au>
    To: Edwin Groothuis <edwin@FreeBSD.org>
    Subject: Re: ports/91537: maths/xgobi - download site moved/maintainer
addressupdate

    Actually I need  modify all my ports to use OptusNet rather than
    Biolateral.  Is there an easy way to do this or should I submit a
    separate 1-line patch and PR for each port?

    biology/crimap
    biology/dna-qc
    biology/flip
    biology/primer3
    biology/seqio
    biology/wise
    math/xgobi
    net/generic-nqs

Submitted by:   Tony Maher <anthony.maher@uts.edu.au>
31 Mar 2004 03:12:58
Original commit files touched by this commit   2.2.0
trevor search for other commits by this committer
SIZEify (maintainer timeout)
22 Oct 2003 09:29:55
Original commit files touched by this commit   2.2.0
osa search for other commits by this committer
Cosmetic fix: use %%DOCSDIR%% macro.
No functionally changes.

Submitted by:   Oleg Karachevtsev <ok@etrust.ru>
A part of PR:   57992
24 Sep 2003 11:32:44
Original commit files touched by this commit   2.2.0
edwin search for other commits by this committer
Port update (maintainer): biology/wise

        Fenner's porsurvey show wise no longer available at original
        site.  Original site readme shows it has moved so update
        the MASTER_SITES accordingly.

PR:             ports/57154
Submmited by:   Tony Maher <tonymaher@optushome.com.au>
21 Feb 2003 11:01:38
Original commit files touched by this commit   2.2.0
knu search for other commits by this committer
De-pkg-comment.
14 Jan 2003 05:30:42
Original commit files touched by this commit   2.2.0
kris search for other commits by this committer
Add missing file
05 Nov 2002 01:44:12
Original commit files touched by this commit   2.2.0
edwin search for other commits by this committer
Modify replace RE to match syntax of sed now ("\)" -> ")"
Noticed by: bento
04 Nov 2002 05:46:38
Original commit files touched by this commit   2.2.0
edwin search for other commits by this committer
PERL -> REINPLACE
And some ports have USE_PERL5=yes now.
10 Sep 2002 13:58:40
Original commit files touched by this commit   2.2.0
dinoex search for other commits by this committer
"Wise2 is package that is focused on comparing DNA sequences at
the level of its conceptual translation, regardless of sequencing
error and introns."

Number of commits found: 28